FFCP PHASE1:Hg19::chr6:33388013..33388053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8831 | |EntrezGene=8831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11497 | |HGNC=11497 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZCA0 | |UniProt=B7ZCA0 | ||
|association_with_transcript=0bp_to_ENST00000449372_5end | |association_with_transcript=0bp_to_ENST00000449372_5end | ||
|cluster_id=chr6:33388013..33388053,+ | |||
|coexpression_cluster_id=C2494 | |||
|description=CAGE_peak_4_at_SYNGAP1_5end | |description=CAGE_peak_4_at_SYNGAP1_5end | ||
|id=chr6:33388013..33388053,+ | |id=chr6:33388013..33388053,+ | ||
|ontology_enrichment_celltype=CL:0000133!3.69e-15!59;CL:0000055!1.77e-12!180;CL:0002319!2.60e-11!25;CL:0000221!7.81e-10!71;CL:0000333!2.99e-09!41;CL:0000047!1.99e-07!8 | |ontology_enrichment_celltype=CL:0000133!3.69e-15!59;CL:0000055!1.77e-12!180;CL:0002319!2.60e-11!25;CL:0000221!7.81e-10!71;CL:0000333!2.99e-09!41;CL:0000047!1.99e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.50e-10;25!CL:0000540;8.38e-09;6!CL:0000404;8.38e-09;6!CL:0002322;4.03e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.18e-11,59;CL:0000047,7.32e-11,8;CL:0002319,3.83e-10,25;CL:0000540,8.54e-09,6;CL:0000031,8.54e-09,6;CL:0000404,8.54e-09,6;CL:0000221,6.12e-08,72;CL:0002322,4.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;8.38e-09;6!UBERON:0006601;5.04e-08;82!CL:0000133;5.53e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.86e-36!82;UBERON:0000073!1.60e-34!94;UBERON:0001016!1.60e-34!94;UBERON:0005743!1.66e-34!86;UBERON:0001049!4.44e-28!57;UBERON:0005068!4.44e-28!57;UBERON:0006241!4.44e-28!57;UBERON:0007135!4.44e-28!57;UBERON:0002346!4.84e-27!90;UBERON:0000955!5.20e-27!69;UBERON:0006238!5.20e-27!69;UBERON:0003075!3.45e-26!86;UBERON:0007284!3.45e-26!86;UBERON:0000924!9.44e-25!173;UBERON:0006601!9.44e-25!173;UBERON:0004121!8.15e-24!169;UBERON:0002616!1.46e-23!59;UBERON:0002780!1.83e-22!41;UBERON:0001890!1.83e-22!41;UBERON:0006240!1.83e-22!41;UBERON:0003080!1.88e-21!42;UBERON:0001893!1.70e-20!34;UBERON:0003056!2.33e-20!61;UBERON:0001869!5.10e-20!32;UBERON:0002020!7.77e-20!34;UBERON:0003528!7.77e-20!34;UBERON:0002791!8.05e-20!33;UBERON:0007023!4.18e-19!115;UBERON:0000153!6.69e-19!129;UBERON:0007811!6.69e-19!129;UBERON:0000033!9.29e-19!123;UBERON:0000956!1.67e-16!25;UBERON:0000203!1.67e-16!25;UBERON:0002619!1.81e-15!22;UBERON:0001950!3.56e-14!20;UBERON:0000475!1.21e-13!365;UBERON:0000481!8.19e-10!347;UBERON:0000468!3.56e-08!659;UBERON:0000483!5.83e-08!309;UBERON:0003076!8.88e-08!15;UBERON:0003057!8.88e-08!15;UBERON:0000119!9.31e-08!312 | |ontology_enrichment_uberon=UBERON:0001017!9.86e-36!82;UBERON:0000073!1.60e-34!94;UBERON:0001016!1.60e-34!94;UBERON:0005743!1.66e-34!86;UBERON:0001049!4.44e-28!57;UBERON:0005068!4.44e-28!57;UBERON:0006241!4.44e-28!57;UBERON:0007135!4.44e-28!57;UBERON:0002346!4.84e-27!90;UBERON:0000955!5.20e-27!69;UBERON:0006238!5.20e-27!69;UBERON:0003075!3.45e-26!86;UBERON:0007284!3.45e-26!86;UBERON:0000924!9.44e-25!173;UBERON:0006601!9.44e-25!173;UBERON:0004121!8.15e-24!169;UBERON:0002616!1.46e-23!59;UBERON:0002780!1.83e-22!41;UBERON:0001890!1.83e-22!41;UBERON:0006240!1.83e-22!41;UBERON:0003080!1.88e-21!42;UBERON:0001893!1.70e-20!34;UBERON:0003056!2.33e-20!61;UBERON:0001869!5.10e-20!32;UBERON:0002020!7.77e-20!34;UBERON:0003528!7.77e-20!34;UBERON:0002791!8.05e-20!33;UBERON:0007023!4.18e-19!115;UBERON:0000153!6.69e-19!129;UBERON:0007811!6.69e-19!129;UBERON:0000033!9.29e-19!123;UBERON:0000956!1.67e-16!25;UBERON:0000203!1.67e-16!25;UBERON:0002619!1.81e-15!22;UBERON:0001950!3.56e-14!20;UBERON:0000475!1.21e-13!365;UBERON:0000481!8.19e-10!347;UBERON:0000468!3.56e-08!659;UBERON:0000483!5.83e-08!309;UBERON:0003076!8.88e-08!15;UBERON:0003057!8.88e-08!15;UBERON:0000119!9.31e-08!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.87e-25;32!UBERON:0001893;7.53e-24;34!UBERON:0000956;1.04e-23;25!UBERON:0000203;1.04e-23;25!UBERON:0002791;1.18e-23;32!UBERON:0003528;3.87e-22;34!UBERON:0002020;3.87e-22;34!UBERON:0002619;1.11e-21;22!UBERON:0002780;9.12e-21;41!UBERON:0001890;9.12e-21;41!UBERON:0000073;7.99e-20;53!UBERON:0002616;7.99e-20;53!UBERON:0001950;1.19e-19;20!UBERON:0001017;1.45e-15;75!UBERON:0000955;1.77e-14;68!UBERON:0001016;2.06e-14;83!UBERON:0001871;1.63e-08;6!UBERON:0011216;3.04e-07;132!UBERON:0000349;4.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.52e-44,81;UBERON:0001016,3.89e-43,89;UBERON:0001049,2.91e-36,56;UBERON:0005068,2.91e-36,56;UBERON:0006241,2.91e-36,56;UBERON:0007135,2.91e-36,56;UBERON:0000073,8.88e-34,53;UBERON:0002616,8.88e-34,53;UBERON:0000955,1.48e-31,68;UBERON:0006238,1.48e-31,68;UBERON:0002346,1.13e-28,86;UBERON:0002780,2.38e-28,41;UBERON:0001890,2.38e-28,41;UBERON:0003080,2.38e-28,41;UBERON:0006240,2.38e-28,41;UBERON:0001869,5.00e-28,32;UBERON:0001893,1.38e-27,34;UBERON:0004121,3.20e-27,171;UBERON:0000924,3.20e-27,171;UBERON:0006601,3.20e-27,171;UBERON:0003075,4.98e-27,82;UBERON:0007284,4.98e-27,82;UBERON:0002791,8.25e-26,32;UBERON:0003528,3.48e-25,34;UBERON:0002020,3.48e-25,34;UBERON:0000956,9.42e-24,25;UBERON:0000203,9.42e-24,25;UBERON:0003056,9.90e-23,61;UBERON:0010371,1.36e-22,104;UBERON:0002619,4.52e-22,22;UBERON:0011216,2.92e-20,223;UBERON:0001950,5.01e-20,20;UBERON:0010314,2.66e-17,132;UBERON:0007023,1.09e-14,114;UBERON:0003076,5.21e-09,15;UBERON:0003057,5.21e-09,15;UBERON:0001871,1.50e-08,6;UBERON:0000200,4.19e-07,6;UBERON:0000349,4.90e-07,5;UBERON:0004733,9.27e-07,12;UBERON:0002028,9.27e-07,12;UBERON:0007277,9.27e-07,12 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,2.10402800032079,2.31978163009541,0,0,0,0,1.72369481307503,1.63200552995402,0.626909442956176,2.0036519099174,1.23186982565596,1.00434111675842,0,0,0,0,0,0.619264493264304,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.579386075843295,0.795285947051099,2.43317435151318,1.60709189178915,0.665188192387692,0.702678285545008,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,1.19168262731897,2.0078563452417,0,0.560677600142307,0,0,0.933633106199299,0,0.326923806226917,0.151357427644931,0,0.937285727335186,0.312160076830321,0,0.149448680551801,0.587172493218824,0.485618833104395,0.421352420106746,0.408308342509787,1.10550885580591,1.13658359293342,1.18800285728205,0.494533858557114,0,1.43723628363248,1.0100166837244,1.00094815897571,0,0.877955241761676,0.612975591598039,0.751190294532984,0,3.40840307808838,0.85422955527427,0.635795703478686,3.60109315301283,0.721367704669072,3.09168648054755,0.744467425326359,1.0126579934476,0.0974370051611986,6.31084435610286,1.01254888506529,2.26304479546337,4.26011511019937,0.906768884048762,1.69560592310488,0,0,0,4.39105342066543,5.16866096453793,4.53156377191122,4.66474747569167,3.02785021050754,4.01475094983413,3.12899064659632,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,3.5317047953172,0,0.171567810298526,0,0,0,0.0925884451585296,0.977424915930974,0,0,3.94163376915261,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,0.207328115540772,0,0.12624243342638,0.253991577168676,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0,0.571652865261156,0,0.43596006883328,0,0.646358578788889,0,0,0.797814349754612,0,1.54324424557285,0,0.532844358032199,1.00084595560703,0.542621605391443,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0,0,0.197030760201927,0,0.128343036279748,2.28685161800217,9.10978977003352,9.27946575333234,11.3911060427357,5.10351001322531,0,0,0,1.34960640891054,3.00102312635806,1.62759014219841,0.831883446123229,1.07057393278297,0.473107245101804,1.7571212248907,0,0,0,0,0.553107505625109,1.56390506042549,1.37060810223918,0.686286847621712,0,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0.581051892299796,0,0,0,0.68888668898764,0.546273504020151,0.917870904715969,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,1.35339005608971,0.308097234229289,0.614014698904518,0.275673144969061,2.0409846524972,3.0453505721988,0.340906509664404,1.33548053470106,0,0,0.127612712494584,0,0,0.94443704049192,2.0911118104818,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0.767693373934002,2.1396949401696,2.22742273548156,0,1.61885211824983,1.64722217841633,2.00281083987667,0.202182481573316,0,0,0.975267478179181,0.487426979262569,0,0.682499557039929,1.41405431953713,0,1.65409603063837,1.32687795048244,0,2.31510213706675,2.62357900818653,0,0.30982349809975,0.281695602532241,1.29070216983646,0.392996164052485,0,1.06428319221179,0.633322905892992,0.987884678879706,1.51789269506286,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,5.62020562452471,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,1.48482340416319,0,7.95318118213038,3.37606599385231,1.00177834520615,0,9.07839254950372,0.398495976502139,0.828851746593443,0,1.1249555075237,0,0,0,0,0,1.1837208676432,0,1.11136990144637,6.78532922266653,3.52518773015035,23.9536557601433,0,0,0,0,0,0,0.344743373241465,0.291604613383254,4.5142498682656,1.77148277162768,3.97968247463846,3.05163472634166,1.99042667876204,2.06883333267483,2.85201016300164,0,0,3.92446318369365,0,0,0,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0,0.335643173951685,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0,0,0.104421949505455,1.68502832451693,0,1.40558667435203,0,0,0.485560759068186,1.18375320854817,1.20990716048664,16.221856366416,2.65383634439649,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.343972064943233,0,0,0,0.387956065953678,1.76512253383001,1.58186518546373,0,0,4.93824208455854,0,0.160317640503067,1.70762395791482,0.19980960958213,0,0,0.514784993585894,0,5.09435395818273,0,0.407712618220842,0.523014231561666,0.611989305817931,0.577901179803038,0.600420288709789,1.23214841002794,0,0,0,0.837847203816763,0.916641696046735,0.7178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| ||
|short_description=p4@SYNGAP1 | |short_description=p4@SYNGAP1 | ||
}} | }} |
Latest revision as of 07:30, 18 September 2015
Short description: | p4@SYNGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNGAP1_5end |
Coexpression cluster: | C2494_brain_neuroblastoma_duodenum_occipital_temporal_parietal_small |
Association with transcript: | 0bp_to_ENST00000449372_5end |
EntrezGene: | SYNGAP1 |
HGNC: | 11497 |
UniProt: | B7ZCA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.18e-11 | 59 |
neuronal stem cell | 7.32e-11 | 8 |
neural cell | 3.83e-10 | 25 |
neuron | 8.54e-09 | 6 |
neuroblast | 8.54e-09 | 6 |
electrically signaling cell | 8.54e-09 | 6 |
ectodermal cell | 6.12e-08 | 72 |
embryonic stem cell | 4.23e-07 | 5 |