FFCP PHASE1:Hg19::chr16:54964899..54964914,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:54964899..54964914,+
|short_description=p2@IRX5
|description=CAGE_peak_2_at_IRX5_5end
|association_with_transcript=125bp_to_ENST00000394636_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10265 | |EntrezGene=10265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14361 | |HGNC=14361 | ||
|TSSclassifier=strong | |||
|UniProt=P78411 | |UniProt=P78411 | ||
|association_with_transcript=125bp_to_ENST00000394636_5end | |||
|cluster_id=chr16:54964899..54964914,+ | |||
|description=CAGE_peak_2_at_IRX5_5end | |||
|id=chr16:54964899..54964914,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;5.52e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,8.48e-11,11;CL:0000375,8.48e-11,11;CL:0000335,8.48e-11,11 | |||
|ontology_enrichment_development_v019=CL:0000335;6.91e-11;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.30e-07;4!DOID:1612;1.30e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.10e-08,4;DOID:1612,9.10e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003076!5.06e-12!15;UBERON:0003057!5.06e-12!15;UBERON:0004732!2.79e-10!13;UBERON:0004733!9.99e-10!12;UBERON:0002028!9.99e-10!12;UBERON:0007277!9.99e-10!12;UBERON:0000924!4.08e-09!173;UBERON:0006601!4.08e-09!173;UBERON:0004121!1.17e-08!169;UBERON:0002346!5.22e-08!90;UBERON:0002680!8.02e-08!9;UBERON:0001895!8.02e-08!9;UBERON:0010092!8.02e-08!9;UBERON:0003102!9.75e-08!95;UBERON:0000475!1.39e-07!365;UBERON:0003075!1.53e-07!86;UBERON:0007284!1.53e-07!86;UBERON:0000033!7.89e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;5.57e-21;13!UBERON:0004733;8.36e-20;12!UBERON:0002028;8.36e-20;12!UBERON:0002680;1.84e-15;9!UBERON:0001895;1.84e-15;9!UBERON:0002037;1.22e-11;6!UBERON:0002298;7.14e-10;6!UBERON:0001044;1.12e-07;6!UBERON:0003293;1.12e-07;6!UBERON:0003294;1.12e-07;6!UBERON:0010047;1.12e-07;6!UBERON:0003408;1.12e-07;6!UBERON:0000167;1.12e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.51e-24,15;UBERON:0003057,2.51e-24,15;UBERON:0004732,1.58e-20,13;UBERON:0004733,2.53e-19,12;UBERON:0002028,2.53e-19,12;UBERON:0007277,2.53e-19,12;UBERON:0002680,3.48e-15,9;UBERON:0001895,3.48e-15,9;UBERON:0010092,3.48e-15,9;UBERON:0002037,1.74e-11,6;UBERON:0006215,1.74e-11,6;UBERON:0003075,1.47e-09,82;UBERON:0007284,1.47e-09,82;UBERON:0002298,1.48e-09,6;UBERON:0002346,1.66e-09,86;UBERON:0010371,1.97e-09,104;UBERON:0004121,4.39e-08,171;UBERON:0000924,4.39e-08,171;UBERON:0006601,4.39e-08,171;UBERON:0001049,6.56e-08,56;UBERON:0005068,6.56e-08,56;UBERON:0006241,6.56e-08,56;UBERON:0007135,6.56e-08,56;UBERON:0001044,9.76e-08,6;UBERON:0003293,9.76e-08,6;UBERON:0003294,9.76e-08,6;UBERON:0010047,9.76e-08,6;UBERON:0000167,9.76e-08,6;UBERON:0007023,7.19e-07,114 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0,3.00219895059391,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.247532705920093,0.994192127183747,0,0,0,0,3.57051068422685,2.24400760368678,5.95563970808367,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0.982343066232845,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,2.57753575017176,0,0,0.149448680551801,0.352303495931295,0.647491777472526,0.421352420106746,0.204154171254893,0.122834317311768,2.58314452939414,1.18800285728205,0.494533858557114,0,0,0,0.500474079487857,0.277064115484183,1.31693286264251,0.612975591598039,0.600952235626387,0.226864366320042,0.89694817844431,1.49490172172997,2.33125091275518,1.20036438433761,0.824420233907511,0.257640540045629,0.744467425326359,1.68776332241266,1.46155507741798,1.51460264546469,1.84099797284599,3.87950536365149,0,0.906768884048762,0.67824236924195,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0.580969714347592,0.725627385107593,0,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.441175890929576,0.435758888184812,0.237270619111097,0,0.588664395376038,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0,0,1.3032332212413,3.11980435583874,0,1.15930404975077,0,0.144366447761074,0,0,7.11183958163348,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0.806026704325635,0,1.15014803749563,0,0,0.207328115540772,0,0.12624243342638,1.65094525159639,0.381988425558278,1.17217447210047,1.71072446022705,0.308482478109971,0,1.14330573052231,0,0,0.07333828582095,0.517086863031111,0,0,0,0,1.02882949704857,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.36807447515742,1.50051156317903,1.62759014219841,0,0,0,0,3.61135319673263,2.27407504055985,0,1.32845119707087,1.10621501125022,0.60818530127658,0,1.37257369524342,0,0,0.106727557803444,0,0,0,0.248107807818777,0.767309866440312,0.841980283299221,0,1.53512174720011,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,1.93375119346596,0.601519410909855,0.368323955743585,0,0,0,1.80479845162965,0.308061348417659,4.70609861506113,4.38417673959782,0.844413031143006,0,0,0,1.54227252690289,0,1.50506932156456,0,0,1.56712328305525,0,0,0,0,0,0.515205058238611,1.37354197227515,1.32015199872941,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.960950336825531,0.382838137483752,0.910420027699949,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0.211107635297664,0.987884678879706,5.31262443272001,7.69856384538962,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0.144269212976445,3.27252479402705,0.956557636372934,0,0,0,1.62310970137278,0,0.912938716132769,0.156679895773023,0,0,0,0,0,0,1.84344458585075,0.894704431569664,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0.242721043499027,0,0,0,0.296964680832639,0,0,0,2.33748280548102,0,3.58913193817589,0.19924798825107,0,0,0.102268682502155,0,0.622079175323615,0,0.179021174675609,1.02314474045374,0,0,4.44547960578548,0,0,0,5.20855522170466,1.39935999993913,5.79999660347835,0,0.508507300585533,0.709163045303809,0,0.291604613383254,2.43074992906609,0.885741385813839,0.482385754501632,7.62908681585416,3.20679853800551,2.06883333267483,0.658156191461918,0.435753854075961,0.41827123283581,0.230850775511391,0.341826167541004,0,0,0,0,0,0,5.10966490978682,0.156980256395025,0,0.451191321234361,0,0,0,0,0,0.163232808159148,0.989471500037586,2.59666367690509,0,0,0,1.48260564340311,0,0.104421949505455,0.606610196826093,0,1.1713222286267,0,0.391329237864179,0.485560759068186,0,0,0.30607276163049,2.40109002588254,0.751617097072463,0.311064574191741,0,0,0,0,0,0.554698692052555,0,0,0.174118413160805,0.873633341210151,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,3.16373037092745,0,0,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0.343189995723929,0,0,0.942776138467182,0.271808412147228,0.209205692624666,0.611989305817931,0.288950589901519,2.40168115483916,0.273810757783986,0,0.429765441419957,0,0.279282401272254,2.97908551215189,0.717873024576814,3.59422200898184,4.72148652950228,8.03417246790741,3.29199015184959,0,1.16495949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| ||
|short_description=p2@IRX5 | |||
}} | }} |
Latest revision as of 23:34, 16 September 2015
Short description: | p2@IRX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 125bp_to_ENST00000394636_5end |
EntrezGene: | IRX5 |
HGNC: | 14361 |
UniProt: | P78411 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 8.48e-11 | 11 |
osteoprogenitor cell | 8.48e-11 | 11 |
mesenchyme condensation cell | 8.48e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 2.51e-24 | 15 |
chordal neural plate | 2.51e-24 | 15 |
segmental subdivision of nervous system | 1.58e-20 | 13 |
segmental subdivision of hindbrain | 2.53e-19 | 12 |
hindbrain | 2.53e-19 | 12 |
presumptive hindbrain | 2.53e-19 | 12 |
regional part of metencephalon | 3.48e-15 | 9 |
metencephalon | 3.48e-15 | 9 |
future metencephalon | 3.48e-15 | 9 |
cerebellum | 1.74e-11 | 6 |
rhombic lip | 1.74e-11 | 6 |
neural plate | 1.47e-09 | 82 |
presumptive neural plate | 1.47e-09 | 82 |
brainstem | 1.48e-09 | 6 |
neurectoderm | 1.66e-09 | 86 |
ecto-epithelium | 1.97e-09 | 104 |
ectoderm-derived structure | 4.39e-08 | 171 |
ectoderm | 4.39e-08 | 171 |
presumptive ectoderm | 4.39e-08 | 171 |
neural tube | 6.56e-08 | 56 |
neural rod | 6.56e-08 | 56 |
future spinal cord | 6.56e-08 | 56 |
neural keel | 6.56e-08 | 56 |
saliva-secreting gland | 9.76e-08 | 6 |
gland of oral region | 9.76e-08 | 6 |
gland of foregut | 9.76e-08 | 6 |
oral gland | 9.76e-08 | 6 |
oral cavity | 9.76e-08 | 6 |
adult organism | 7.19e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.10e-08 | 4 |
breast cancer | 9.10e-08 | 4 |