FFCP PHASE1:Hg19::chr6:160109243..160109285,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=94bp_to_ENST00000535459_5end | |association_with_transcript=94bp_to_ENST00000535459_5end | ||
|cluster_id=chr6:160109243..160109285,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_SOD2_5end | |description=CAGE_peak_8_at_SOD2_5end | ||
|id=chr6:160109243..160109285,- | |id=chr6:160109243..160109285,- | ||
|ontology_enrichment_celltype=CL:0002057!6.73e-21!42;CL:0000860!1.45e-20!45;CL:0000766!1.04e-17!76;CL:0002194!1.12e-17!63;CL:0000576!1.12e-17!63;CL:0000040!1.12e-17!63;CL:0000559!1.12e-17!63;CL:0002009!4.39e-17!65;CL:0000839!3.39e-14!70;CL:0000557!1.03e-13!71;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | |ontology_enrichment_celltype=CL:0002057!6.73e-21!42;CL:0000860!1.45e-20!45;CL:0000766!1.04e-17!76;CL:0002194!1.12e-17!63;CL:0000576!1.12e-17!63;CL:0000040!1.12e-17!63;CL:0000559!1.12e-17!63;CL:0002009!4.39e-17!65;CL:0000839!3.39e-14!70;CL:0000557!1.03e-13!71;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-30;33!CL:0002057;1.29e-30;33!CL:0000473;2.61e-28;39!CL:0000234;2.61e-28;39!CL:0000576;1.15e-15;48!CL:0000766;1.69e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.22e-32,48;CL:0000234,1.22e-32,48;CL:0000860,5.57e-29,42;CL:0002057,5.57e-29,42;CL:0000766,4.41e-26,72;CL:0002194,2.78e-25,59;CL:0000576,2.78e-25,59;CL:0000040,2.78e-25,59;CL:0000559,2.78e-25,59;CL:0002009,5.86e-24,61;CL:0000839,5.13e-21,66;CL:0000557,1.75e-20,67;CL:0000763,1.26e-12,108;CL:0000049,1.26e-12,108;CL:0000738,4.13e-08,136;CL:0002087,5.61e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.92e-13!167;UBERON:0002193!3.26e-13!112;UBERON:0002390!1.61e-11!102;UBERON:0003061!1.61e-11!102;UBERON:0002371!2.17e-11!80;UBERON:0007023!4.49e-10!115;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0001474!1.78e-09!86;UBERON:0002405!1.82e-09!115 | |ontology_enrichment_uberon=UBERON:0002204!1.92e-13!167;UBERON:0002193!3.26e-13!112;UBERON:0002390!1.61e-11!102;UBERON:0003061!1.61e-11!102;UBERON:0002371!2.17e-11!80;UBERON:0007023!4.49e-10!115;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0001474!1.78e-09!86;UBERON:0002405!1.82e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-21,108;UBERON:0002390,8.50e-20,98;UBERON:0003061,8.50e-20,98;UBERON:0002371,3.01e-17,76;UBERON:0002204,1.81e-16,167;UBERON:0002405,4.18e-16,93;UBERON:0001474,6.00e-15,82;UBERON:0004765,1.46e-14,90;UBERON:0003081,1.86e-14,203;UBERON:0001434,2.59e-14,100;UBERON:0000926,5.08e-11,315;UBERON:0004120,5.08e-11,315;UBERON:0006603,5.08e-11,315;UBERON:0007023,4.29e-08,114;UBERON:0000178,9.34e-07,15;UBERON:0000179,9.34e-07,15;UBERON:0000463,9.34e-07,15 | |||
|phase1_expression=0,2.35510576280081,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0,1.04474251279935,0,0,0,0,0.74259811776028,0.994192127183747,8.0679017574213,4.21886169616784,2.92124036154949,4.87932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0,0.0787107813136792,0.786728553697808,1.15148819429164,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0,1.10799081706375,9.22504458362652,6.2933152507597,0.671746422719773,1.29557466407592,0.257575567634187,5.81592955118259,2.64513160582167,3.39617685662943,32.5400651667958,33.7157668177897,21.3697395917621,44.016936025289,32.2762490226667,27.9049031268531,48.9538866645998,29.0468107612722,35.2108865145289,18.4477492751753,15.2827444032394,9.21366286224847,67.9506241063404,25.0324641119353,47.9502844349281,23.0895910130701,18.5501201588118,13.2129672665135,99.5417688496043,72.6253087604659,69.1332696385088,23.3661258688771,27.6385946762707,10.8594422352558,78.7019353423379,36.0912083267813,55.0644554147139,0.211255286311942,0.850417199860174,0.628975936525128,0.22465726229299,0.600707571366025,1.76798145366788,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,2.80254281490768,0.263384084775077,0.393419540227666,0.786021525498329,1.23360899399706,0,0,0,1.94826728407911,0.111410456885174,0.589211814949674,0.443067789167242,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,4.87613732627923,0,0,0,0,1.15877215168659,0,5.35298357332899,0,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0.174129737299267,1.06366368415092,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.71153252537342,1.33888245105868,0.402829317109147,0,1.46437234528902,0.367663080345869,0,0,0.44905874525234,0,0,0,0,11.8602375692457,7.75560528296651,0,0,0.12663051166458,0.662045904066094,0,0,0.560677600142307,0,0.98667019366864,0,3.09834545760283,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,1.04614076386261,0.352303495931295,0,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,2.37600571456411,3.4617370098998,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,4.20666564938471,0,0,0.213557388818567,0,0,0.515262646192195,0.257640540045629,0.37223371266318,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,6.25798129319264,0.643240938192885,0,6.03678306441573,2.16563844500876,0.118306800039844,0.505754070234305,0,0.441175890929576,0.217879444092406,0.71181185733329,0.674156540800822,0.392442930250692,0,0,0,0.4115740113314,0,8.87285243752816,7.86261773342101,2.95394953340702,0,0.122988438543114,0,0,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.115930404975077,0,10.3943842387973,14.3525508898749,19.405923527929,0.790204397959275,0,0.738651018262192,1.8720341211139,3.86441021950693,1.87467667973554,0.16798212819886,0.567100388969546,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0.646358578788889,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,2.69927076191554,4.86495122564762,7.03159928004977,27.4084121327941,0.239624855491583,0,1.42636905040718,1.44781306667579,2.87666851570537,0.537182889719687,0,0.197030760201927,0.215627574859517,0.513372145118994,0.254094624222463,0,1.54657762555539,0,1.27587750330633,19.4741826226267,62.8239064328452,15.3333739971333,0.36807447515742,1.00034104211935,1.35632511849868,1.24782516918484,1.07057393278297,0.788512075169673,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.521301686808497,0,0,0,1.94142780736755,1.06727557803444,0,0,0.30239029332968,0.248107807818777,0,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,2.07701771673448,0.581051892299796,0.120859449591622,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,2.36023946926963,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0,0,0.325378394664303,1.64865618636356,0.183138929636687,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.460511024178389,0.964856007391714,0.322260734604821,0.435050081742686,0.511359764496605,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.50578890427775,0.464845549297286,0,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,2.43312307461385,0,0,0.190630193923825,0,0.85587797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|phase1_expression=0,2.35510576280081,0.704772020479856,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0,1.04474251279935,0,0,0,0,0.74259811776028,0.994192127183747,8.0679017574213,4.21886169616784,2.92124036154949,4.87932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0,0.0787107813136792,0.786728553697808,1.15148819429164,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0,1.10799081706375,9.22504458362652,6.2933152507597,0.671746422719773,1.29557466407592,0.257575567634187,5.81592955118259,2.64513160582167,3.39617685662943,32.5400651667958,33.7157668177897,21.3697395917621,44.016936025289,32.2762490226667,27.9049031268531,48.9538866645998,29.0468107612722,35.2108865145289,18.4477492751753,15.2827444032394,9.21366286224847,67.9506241063404,25.0324641119353,47.9502844349281,23.0895910130701,18.5501201588118,13.2129672665135,99.5417688496043,72.6253087604659,69.1332696385088,23.3661258688771,27.6385946762707,10.8594422352558,78.7019353423379,36.0912083267813,55.0644554147139,0.211255286311942,0.850417199860174,0.628975936525128,0.22465726229299,0.600707571366025,1.76798145366788,0.285012743741249,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,2.80254281490768,0.263384084775077,0.393419540227666,0.786021525498329,1.23360899399706,0,0,0,1.94826728407911,0.111410456885174,0.589211814949674,0.443067789167242,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,4.87613732627923,0,0,0,0,1.15877215168659,0,5.35298357332899,0,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0.174129737299267,1.06366368415092,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0.208994966536811,0.258416759169329,0.71153252537342,1.33888245105868,0.402829317109147,0,1.46437234528902,0.367663080345869,0,0,0.44905874525234,0,0,0,0,11.8602375692457,7.75560528296651,0,0,0.12663051166458,0.662045904066094,0,0,0.560677600142307,0,0.98667019366864,0,3.09834545760283,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,1.04614076386261,0.352303495931295,0,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,2.37600571456411,3.4617370098998,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,4.20666564938471,0,0,0.213557388818567,0,0,0.515262646192195,0.257640540045629,0.37223371266318,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,6.25798129319264,0.643240938192885,0,6.03678306441573,2.16563844500876,0.118306800039844,0.505754070234305,0,0.441175890929576,0.217879444092406,0.71181185733329,0.674156540800822,0.392442930250692,0,0,0,0.4115740113314,0,8.87285243752816,7.86261773342101,2.95394953340702,0,0.122988438543114,0,0,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.115930404975077,0,10.3943842387973,14.3525508898749,19.405923527929,0.790204397959275,0,0.738651018262192,1.8720341211139,3.86441021950693,1.87467667973554,0.16798212819886,0.567100388969546,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0.646358578788889,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0.871533458600294,2.69927076191554,4.86495122564762,7.03159928004977,27.4084121327941,0.239624855491583,0,1.42636905040718,1.44781306667579,2.87666851570537,0.537182889719687,0,0.197030760201927,0.215627574859517,0.513372145118994,0.254094624222463,0,1.54657762555539,0,1.27587750330633,19.4741826226267,62.8239064328452,15.3333739971333,0.36807447515742,1.00034104211935,1.35632511849868,1.24782516918484,1.07057393278297,0.788512075169673,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.521301686808497,0,0,0,1.94142780736755,1.06727557803444,0,0,0.30239029332968,0.248107807818777,0,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0.0821271560138091,2.07701771673448,0.581051892299796,0.120859449591622,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,2.36023946926963,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,0,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0,0,0.325378394664303,1.64865618636356,0.183138929636687,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.460511024178389,0.964856007391714,0.322260734604821,0.435050081742686,0.511359764496605,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.50578890427775,0.464845549297286,0,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,2.43312307461385,0,0,0.190630193923825,0,0.85587797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| ||
|short_description=p8@SOD2 | |short_description=p8@SOD2 | ||
}} | }} |
Latest revision as of 14:31, 16 September 2015
Short description: | p8@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SOD2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 94bp_to_ENST00000535459_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.22e-32 | 48 |
phagocyte | 1.22e-32 | 48 |
classical monocyte | 5.57e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.57e-29 | 42 |
myeloid leukocyte | 4.41e-26 | 72 |
monopoietic cell | 2.78e-25 | 59 |
monocyte | 2.78e-25 | 59 |
monoblast | 2.78e-25 | 59 |
promonocyte | 2.78e-25 | 59 |
macrophage dendritic cell progenitor | 5.86e-24 | 61 |
myeloid lineage restricted progenitor cell | 5.13e-21 | 66 |
granulocyte monocyte progenitor cell | 1.75e-20 | 67 |
myeloid cell | 1.26e-12 | 108 |
common myeloid progenitor | 1.26e-12 | 108 |
leukocyte | 4.13e-08 | 136 |
nongranular leukocyte | 5.61e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-21 | 108 |
hematopoietic system | 8.50e-20 | 98 |
blood island | 8.50e-20 | 98 |
bone marrow | 3.01e-17 | 76 |
musculoskeletal system | 1.81e-16 | 167 |
immune system | 4.18e-16 | 93 |
bone element | 6.00e-15 | 82 |
skeletal element | 1.46e-14 | 90 |
lateral plate mesoderm | 1.86e-14 | 203 |
skeletal system | 2.59e-14 | 100 |
mesoderm | 5.08e-11 | 315 |
mesoderm-derived structure | 5.08e-11 | 315 |
presumptive mesoderm | 5.08e-11 | 315 |
adult organism | 4.29e-08 | 114 |
blood | 9.34e-07 | 15 |
haemolymphatic fluid | 9.34e-07 | 15 |
organism substance | 9.34e-07 | 15 |