FFCP PHASE1:Hg19::chr6:12007918..12007931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000437559_5end | |association_with_transcript=15bp_to_ENST00000437559_5end | ||
|cluster_id=chr6:12007918..12007931,+ | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_ENST00000437559_5end | |description=CAGE_peak_1_at_ENST00000437559_5end | ||
|id=chr6:12007918..12007931,+ | |id=chr6:12007918..12007931,+ | ||
|ontology_enrichment_celltype=CL:0002586!6.38e-08!3;CL:0000064!6.68e-08!3;CL:0005012!6.68e-08!3;CL:0000067!6.68e-08!3;CL:0002304!6.68e-08!3;CL:1000497!8.64e-07!18;CL:0002518!8.64e-07!18 | |ontology_enrichment_celltype=CL:0002586!6.38e-08!3;CL:0000064!6.68e-08!3;CL:0005012!6.68e-08!3;CL:0000067!6.68e-08!3;CL:0002304!6.68e-08!3;CL:1000497!8.64e-07!18;CL:0002518!8.64e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002586;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.37e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.02e-19!20;UBERON:0000020!6.36e-19!23;UBERON:0002104!2.61e-18!21;UBERON:0001032!5.85e-18!24;UBERON:0004456!5.85e-18!24;UBERON:0000019!8.30e-18!19;UBERON:0000047!8.30e-18!19;UBERON:0004088!8.30e-18!19;UBERON:0003072!8.30e-18!19;UBERON:0003071!8.30e-18!19;UBERON:0004128!8.30e-18!19;UBERON:0007625!4.21e-16!11;UBERON:0001456!8.90e-16!21;UBERON:0000966!1.09e-11!5;UBERON:0005388!1.09e-11!5;UBERON:0001802!1.09e-11!5;UBERON:0001444!1.20e-10!48;UBERON:0000489!1.21e-10!32;UBERON:0005085!1.72e-10!29;UBERON:0000488!5.99e-10!4;UBERON:0002113!9.72e-10!27;UBERON:0003918!9.72e-10!27;UBERON:0005095!9.72e-10!27;UBERON:0007687!9.72e-10!27;UBERON:0001801!2.17e-09!14;UBERON:0000080!1.04e-08!18;UBERON:0002120!1.04e-08!18;UBERON:0004875!1.04e-08!18;UBERON:0005721!1.04e-08!18;UBERON:0005754!1.04e-08!18;UBERON:0007297!1.04e-08!18;UBERON:0000153!1.64e-08!129;UBERON:0007811!1.64e-08!129;UBERON:0003075!2.37e-08!86;UBERON:0007284!2.37e-08!86;UBERON:0000063!2.45e-08!97;UBERON:0001781!6.38e-08!3;UBERON:0001782!6.38e-08!3;UBERON:0005424!6.38e-08!3;UBERON:0001778!6.68e-08!3;UBERON:0001775!6.68e-08!3;UBERON:0002346!1.00e-07!90;UBERON:0000064!1.06e-07!219;UBERON:0006554!1.09e-07!44;UBERON:0004121!1.14e-07!169;UBERON:0004876!1.19e-07!20;UBERON:0001008!1.94e-07!45;UBERON:0006555!2.34e-07!17;UBERON:0005103!2.34e-07!17;UBERON:0000083!2.34e-07!17;UBERON:0009201!2.34e-07!17;UBERON:0004819!2.34e-07!17;UBERON:0006553!2.34e-07!17;UBERON:0003074!2.34e-07!17;UBERON:0003060!2.34e-07!17;UBERON:0000924!2.68e-07!173;UBERON:0006601!2.68e-07!173;UBERON:0003887!3.37e-07!21;UBERON:0001896!3.83e-07!3;UBERON:0005290!3.83e-07!3;UBERON:0010096!3.83e-07!3;UBERON:0003103!6.17e-07!69;UBERON:0000062!9.46e-07!511 | |ontology_enrichment_uberon=UBERON:0000970!2.02e-19!20;UBERON:0000020!6.36e-19!23;UBERON:0002104!2.61e-18!21;UBERON:0001032!5.85e-18!24;UBERON:0004456!5.85e-18!24;UBERON:0000019!8.30e-18!19;UBERON:0000047!8.30e-18!19;UBERON:0004088!8.30e-18!19;UBERON:0003072!8.30e-18!19;UBERON:0003071!8.30e-18!19;UBERON:0004128!8.30e-18!19;UBERON:0007625!4.21e-16!11;UBERON:0001456!8.90e-16!21;UBERON:0000966!1.09e-11!5;UBERON:0005388!1.09e-11!5;UBERON:0001802!1.09e-11!5;UBERON:0001444!1.20e-10!48;UBERON:0000489!1.21e-10!32;UBERON:0005085!1.72e-10!29;UBERON:0000488!5.99e-10!4;UBERON:0002113!9.72e-10!27;UBERON:0003918!9.72e-10!27;UBERON:0005095!9.72e-10!27;UBERON:0007687!9.72e-10!27;UBERON:0001801!2.17e-09!14;UBERON:0000080!1.04e-08!18;UBERON:0002120!1.04e-08!18;UBERON:0004875!1.04e-08!18;UBERON:0005721!1.04e-08!18;UBERON:0005754!1.04e-08!18;UBERON:0007297!1.04e-08!18;UBERON:0000153!1.64e-08!129;UBERON:0007811!1.64e-08!129;UBERON:0003075!2.37e-08!86;UBERON:0007284!2.37e-08!86;UBERON:0000063!2.45e-08!97;UBERON:0001781!6.38e-08!3;UBERON:0001782!6.38e-08!3;UBERON:0005424!6.38e-08!3;UBERON:0001778!6.68e-08!3;UBERON:0001775!6.68e-08!3;UBERON:0002346!1.00e-07!90;UBERON:0000064!1.06e-07!219;UBERON:0006554!1.09e-07!44;UBERON:0004121!1.14e-07!169;UBERON:0004876!1.19e-07!20;UBERON:0001008!1.94e-07!45;UBERON:0006555!2.34e-07!17;UBERON:0005103!2.34e-07!17;UBERON:0000083!2.34e-07!17;UBERON:0009201!2.34e-07!17;UBERON:0004819!2.34e-07!17;UBERON:0006553!2.34e-07!17;UBERON:0003074!2.34e-07!17;UBERON:0003060!2.34e-07!17;UBERON:0000924!2.68e-07!173;UBERON:0006601!2.68e-07!173;UBERON:0003887!3.37e-07!21;UBERON:0001896!3.83e-07!3;UBERON:0005290!3.83e-07!3;UBERON:0010096!3.83e-07!3;UBERON:0003103!6.17e-07!69;UBERON:0000062!9.46e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.47e-19;1!UBERON:0002426;2.47e-19;1!UBERON:0003831;2.47e-19;1!UBERON:0003898;2.47e-19;1!UBERON:0004830;2.47e-19;1!UBERON:0003830;2.47e-19;1!UBERON:0005175;2.47e-19;1!UBERON:0001774;2.47e-19;1!UBERON:0001103;2.47e-19;1!UBERON:0000341;2.37e-10;2!UBERON:0005090;2.37e-10;2!UBERON:0001630;2.37e-10;2!UBERON:0001896;2.55e-07;3!UBERON:0001781;2.55e-07;3!UBERON:0001782;2.55e-07;3!UBERON:0006947;2.55e-07;3!UBERON:0005290;2.55e-07;3!UBERON:0004054;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.88e-19,1;UBERON:0003831,1.88e-19,1;UBERON:0003898,1.88e-19,1;UBERON:0004830,1.88e-19,1;UBERON:0003830,1.88e-19,1;UBERON:0005175,1.88e-19,1;UBERON:0001774,1.88e-19,1;UBERON:0001103,1.88e-19,1;UBERON:0010084,1.88e-19,1;UBERON:0001301,5.62e-19,1;UBERON:0000341,1.72e-10,2;UBERON:0005090,2.07e-10,2;UBERON:0001630,2.07e-10,2;UBERON:0001782,2.19e-07,3;UBERON:0005424,2.19e-07,3;UBERON:0001896,2.79e-07,3;UBERON:0005290,2.79e-07,3;UBERON:0010096,2.79e-07,3;UBERON:0006947,3.35e-07,3;UBERON:0004054,3.35e-07,3;UBERON:0002113,8.04e-07,26;UBERON:0003918,8.04e-07,26;UBERON:0011143,8.04e-07,26;UBERON:0005095,8.04e-07,26;UBERON:0007687,8.04e-07,26 | |||
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|short_description=p1@ENST00000437559 | |short_description=p1@ENST00000437559 | ||
}} | }} |
Latest revision as of 18:49, 30 July 2015
Short description: | p1@ENST00000437559 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437559_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 15bp_to_ENST00000437559_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.88e-19 | 1 |
respiratory system muscle | 1.88e-19 | 1 |
skeletal muscle of trunk | 1.88e-19 | 1 |
respiratory system skeletal muscle | 1.88e-19 | 1 |
thoracic segment muscle | 1.88e-19 | 1 |
chest organ | 1.88e-19 | 1 |
muscle of trunk | 1.88e-19 | 1 |
diaphragm | 1.88e-19 | 1 |
future diaphragm | 1.88e-19 | 1 |
epididymis | 5.62e-19 | 1 |
throat | 1.72e-10 | 2 |
muscle structure | 2.07e-10 | 2 |
muscle organ | 2.07e-10 | 2 |
pigmented layer of retina | 2.19e-07 | 3 |
presumptive retinal pigmented epithelium | 2.19e-07 | 3 |
medulla oblongata | 2.79e-07 | 3 |
myelencephalon | 2.79e-07 | 3 |
future myelencephalon | 2.79e-07 | 3 |
male genital duct | 3.35e-07 | 3 |
internal male genitalia | 3.35e-07 | 3 |
kidney | 8.04e-07 | 26 |
kidney mesenchyme | 8.04e-07 | 26 |
upper urinary tract | 8.04e-07 | 26 |
kidney rudiment | 8.04e-07 | 26 |
kidney field | 8.04e-07 | 26 |