FFCP PHASE1:Hg19::chr6:112115045..112115066,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2534 | |EntrezGene=2534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4037 | |HGNC=4037 | ||
|TSSclassifier=strong | |||
|UniProt=B3KPS6 | |UniProt=B3KPS6 | ||
|association_with_transcript=17bp_to_ENST00000544792,uc003pvj.2_5end | |association_with_transcript=17bp_to_ENST00000544792,uc003pvj.2_5end | ||
|cluster_id=chr6:112115045..112115066,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_9_at_FYN_5end | |description=CAGE_peak_9_at_FYN_5end | ||
|id=chr6:112115045..112115066,- | |id=chr6:112115045..112115066,- | ||
|ontology_enrichment_celltype=CL:0000791!1.67e-28!18;CL:0000789!1.67e-28!18;CL:0002420!1.67e-28!18;CL:0002419!1.67e-28!18;CL:0000790!1.67e-28!18;CL:0000738!2.92e-26!140;CL:0000084!5.24e-21!25;CL:0000827!5.24e-21!25;CL:0000037!1.30e-20!172;CL:0000566!1.30e-20!172;CL:0000988!4.71e-20!182;CL:0002087!7.75e-20!119;CL:0000625!2.93e-19!11;CL:0002032!3.53e-18!165;CL:0000837!3.53e-18!165;CL:0002031!7.65e-18!124;CL:0000838!1.01e-17!52;CL:0000542!3.22e-17!53;CL:0000051!3.22e-17!53;CL:0000094!9.97e-11!8;CL:0000624!1.07e-09!6;CL:0000766!2.13e-08!76;CL:0000081!2.19e-07!11;CL:0000623!9.71e-07!3;CL:0000825!9.71e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.67e-28!18;CL:0000789!1.67e-28!18;CL:0002420!1.67e-28!18;CL:0002419!1.67e-28!18;CL:0000790!1.67e-28!18;CL:0000738!2.92e-26!140;CL:0000084!5.24e-21!25;CL:0000827!5.24e-21!25;CL:0000037!1.30e-20!172;CL:0000566!1.30e-20!172;CL:0000988!4.71e-20!182;CL:0002087!7.75e-20!119;CL:0000625!2.93e-19!11;CL:0002032!3.53e-18!165;CL:0000837!3.53e-18!165;CL:0002031!7.65e-18!124;CL:0000838!1.01e-17!52;CL:0000542!3.22e-17!53;CL:0000051!3.22e-17!53;CL:0000094!9.97e-11!8;CL:0000624!1.07e-09!6;CL:0000766!2.13e-08!76;CL:0000081!2.19e-07!11;CL:0000623!9.71e-07!3;CL:0000825!9.71e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.17e-46;11!CL:0000791;1.57e-44;18!CL:0000789;1.57e-44;18!CL:0002419;1.57e-44;18!CL:0000084;3.71e-31;25!CL:0000094;3.09e-19;8!CL:0000542;1.92e-15;53!CL:0000623;9.42e-15;3!CL:0000226;7.28e-14;3!CL:0000842;7.28e-14;3!CL:0000081;8.00e-14;11!CL:0000767;1.18e-13;3!CL:0000771;4.96e-10;2!CL:0002087;2.63e-08;104!CL:0000624;8.30e-07;6!CL:0002393;9.58e-07;6!CL:0002397;9.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.92e-47,11;CL:0000791,9.71e-45,18;CL:0000789,9.71e-45,18;CL:0002420,9.71e-45,18;CL:0002419,9.71e-45,18;CL:0000790,9.71e-45,18;CL:0000838,1.06e-32,52;CL:0000542,5.48e-32,53;CL:0000051,5.48e-32,53;CL:0000738,2.19e-31,136;CL:0000084,2.63e-31,25;CL:0000827,2.63e-31,25;CL:0002087,6.98e-25,115;CL:0000037,6.01e-24,168;CL:0000988,2.45e-22,177;CL:0002032,2.52e-20,161;CL:0000837,2.52e-20,161;CL:0000094,2.43e-19,8;CL:0002031,3.30e-18,120;CL:0000623,9.02e-15,3;CL:0000825,9.02e-15,3;CL:0000081,6.75e-14,11;CL:0000226,8.68e-14,3;CL:0000842,8.68e-14,3;CL:0000767,1.13e-13,3;CL:0000771,4.34e-10,2;CL:0000134,1.50e-09,354;CL:0002320,3.32e-09,361;CL:0000219,5.39e-08,386;CL:0000624,7.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.57e-44;18!CL:0000051;1.92e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.62e-16!15;UBERON:0000179!9.62e-16!15;UBERON:0000463!9.62e-16!15;UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002193!4.23e-14!112;UBERON:0004177!1.45e-10!7;UBERON:0002405!2.76e-07!115 | |ontology_enrichment_uberon=UBERON:0000178!9.62e-16!15;UBERON:0000179!9.62e-16!15;UBERON:0000463!9.62e-16!15;UBERON:0002390!1.29e-14!102;UBERON:0003061!1.29e-14!102;UBERON:0002193!4.23e-14!112;UBERON:0004177!1.45e-10!7;UBERON:0002405!2.76e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.92e-13;3!UBERON:0000178;1.06e-09;15!UBERON:0000179;1.06e-09;15!UBERON:0000463;1.06e-09;15!UBERON:0002390;3.21e-09;32!UBERON:0004177;5.20e-08;5!UBERON:0005057;5.20e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.83e-13,3;UBERON:0004854,4.83e-13,3;UBERON:0009034,4.83e-13,3;UBERON:0002095,4.83e-13,3;UBERON:0004782,4.83e-13,3;UBERON:0003281,4.83e-13,3;UBERON:0009664,4.83e-13,3;UBERON:0002296,4.83e-13,3;UBERON:0005602,4.83e-13,3;UBERON:0001179,4.83e-13,3;UBERON:0006293,4.83e-13,3;UBERON:0004177,7.87e-10,7;UBERON:0005057,7.87e-10,7;UBERON:0000178,1.30e-09,15;UBERON:0000179,1.30e-09,15;UBERON:0000463,1.30e-09,15;UBERON:0002384,9.78e-09,371 | |||
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| ||
|short_description=p9@FYN | |short_description=p9@FYN | ||
}} | }} |
Latest revision as of 21:29, 19 September 2015
Short description: | p9@FYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FYN_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 17bp_to_ENST00000544792, uc003pvj.2_5end |
EntrezGene: | FYN |
HGNC: | 4037 |
UniProt: | B3KPS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.92e-47 | 11 |
mature alpha-beta T cell | 9.71e-45 | 18 |
alpha-beta T cell | 9.71e-45 | 18 |
immature T cell | 9.71e-45 | 18 |
mature T cell | 9.71e-45 | 18 |
immature alpha-beta T cell | 9.71e-45 | 18 |
lymphoid lineage restricted progenitor cell | 1.06e-32 | 52 |
lymphocyte | 5.48e-32 | 53 |
common lymphoid progenitor | 5.48e-32 | 53 |
leukocyte | 2.19e-31 | 136 |
T cell | 2.63e-31 | 25 |
pro-T cell | 2.63e-31 | 25 |
nongranular leukocyte | 6.98e-25 | 115 |
hematopoietic stem cell | 6.01e-24 | 168 |
hematopoietic cell | 2.45e-22 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-20 | 161 |
granulocyte | 2.43e-19 | 8 |
hematopoietic lineage restricted progenitor cell | 3.30e-18 | 120 |
natural killer cell | 9.02e-15 | 3 |
pro-NK cell | 9.02e-15 | 3 |
blood cell | 6.75e-14 | 11 |
single nucleate cell | 8.68e-14 | 3 |
mononuclear cell | 8.68e-14 | 3 |
basophil | 1.13e-13 | 3 |
eosinophil | 4.34e-10 | 2 |
mesenchymal cell | 1.50e-09 | 354 |
connective tissue cell | 3.32e-09 | 361 |
motile cell | 5.39e-08 | 386 |
CD4-positive, alpha-beta T cell | 7.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.83e-13 | 3 |
gastrointestinal system mesentery | 4.83e-13 | 3 |
stomach region | 4.83e-13 | 3 |
mesentery | 4.83e-13 | 3 |
gastrointestinal system serosa | 4.83e-13 | 3 |
mesentery of stomach | 4.83e-13 | 3 |
gut mesentery | 4.83e-13 | 3 |
dorsal mesentery | 4.83e-13 | 3 |
dorsal mesogastrium | 4.83e-13 | 3 |
peritoneal cavity | 4.83e-13 | 3 |
spleen primordium | 4.83e-13 | 3 |
hemopoietic organ | 7.87e-10 | 7 |
immune organ | 7.87e-10 | 7 |
blood | 1.30e-09 | 15 |
haemolymphatic fluid | 1.30e-09 | 15 |
organism substance | 1.30e-09 | 15 |
connective tissue | 9.78e-09 | 371 |