FFCP PHASE1:Hg19::chr5:72744336..72744359,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2297 | |EntrezGene=2297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3802 | |HGNC=3802 | ||
|TSSclassifier=strong | |||
|UniProt=Q16676 | |UniProt=Q16676 | ||
|association_with_transcript=0bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | |association_with_transcript=0bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | ||
|cluster_id=chr5:72744336..72744359,- | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_5_at_FOXD1_5end | |description=CAGE_peak_5_at_FOXD1_5end | ||
|id=chr5:72744336..72744359,- | |id=chr5:72744336..72744359,- | ||
|ontology_enrichment_celltype=CL:0000055!3.31e-16!180;CL:0000359!9.62e-15!32;CL:0000183!2.21e-12!59;CL:0000192!3.27e-12!42;CL:0000514!3.27e-12!42;CL:0000680!1.84e-10!57;CL:0000056!1.84e-10!57;CL:0000355!1.84e-10!57;CL:0000187!2.49e-10!54;CL:0000393!4.04e-08!60;CL:0000211!4.04e-08!60;CL:0002539!5.49e-07!10;CL:0000057!8.06e-07!75 | |ontology_enrichment_celltype=CL:0000055!3.31e-16!180;CL:0000359!9.62e-15!32;CL:0000183!2.21e-12!59;CL:0000192!3.27e-12!42;CL:0000514!3.27e-12!42;CL:0000680!1.84e-10!57;CL:0000056!1.84e-10!57;CL:0000355!1.84e-10!57;CL:0000187!2.49e-10!54;CL:0000393!4.04e-08!60;CL:0000211!4.04e-08!60;CL:0002539!5.49e-07!10;CL:0000057!8.06e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.98e-13;32!CL:0000669;6.78e-13;4!CL:0002594;3.46e-12;4!CL:0002539;6.59e-11;10!CL:0002575;6.83e-08;2!CL:0000054;4.69e-07;2!CL:0002549;4.69e-07;2!CL:0000137;4.69e-07;2!CL:0000092;4.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.67e-13,32;CL:0000669,7.56e-13,4;CL:0002594,4.52e-12,4;CL:0002539,8.76e-11,10;CL:0000192,5.02e-09,43;CL:0000514,5.02e-09,43;CL:0002575,6.90e-08,2;CL:0000187,1.41e-07,55;CL:0000054,2.53e-07,2;CL:0000137,2.53e-07,2;CL:0000092,2.53e-07,2;CL:0002549,2.61e-07,2;CL:0000680,5.01e-07,58;CL:0000056,5.01e-07,58;CL:0000355,5.01e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:200;4.69e-07;2!DOID:4305;4.69e-07;2!DOID:0060072;5.05e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.53e-07,2;DOID:4305,2.53e-07,2;DOID:0060072,3.24e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0000486!2.30e-10!82;UBERON:0004290!2.60e-10!70;UBERON:0001134!5.84e-09!61;UBERON:0002036!5.84e-09!61;UBERON:0003082!5.84e-09!61;UBERON:0001637!2.26e-08!42;UBERON:0003509!2.26e-08!42;UBERON:0004572!2.26e-08!42;UBERON:0002385!2.69e-08!63;UBERON:0001015!2.69e-08!63;UBERON:0000383!2.69e-08!63;UBERON:0000475!3.46e-08!365;UBERON:0002100!2.56e-07!216;UBERON:0004573!3.16e-07!33;UBERON:0004571!3.16e-07!33;UBERON:0004237!5.49e-07!10;UBERON:0004695!5.49e-07!10;UBERON:0002111!5.49e-07!10;UBERON:0004178!5.49e-07!10 | |ontology_enrichment_uberon=UBERON:0000914!1.73e-11!83;UBERON:0002329!1.73e-11!83;UBERON:0003077!1.73e-11!83;UBERON:0003059!1.73e-11!83;UBERON:0007282!1.73e-11!83;UBERON:0009618!1.73e-11!83;UBERON:0007285!1.73e-11!83;UBERON:0000486!2.30e-10!82;UBERON:0004290!2.60e-10!70;UBERON:0001134!5.84e-09!61;UBERON:0002036!5.84e-09!61;UBERON:0003082!5.84e-09!61;UBERON:0001637!2.26e-08!42;UBERON:0003509!2.26e-08!42;UBERON:0004572!2.26e-08!42;UBERON:0002385!2.69e-08!63;UBERON:0001015!2.69e-08!63;UBERON:0000383!2.69e-08!63;UBERON:0000475!3.46e-08!365;UBERON:0002100!2.56e-07!216;UBERON:0004573!3.16e-07!33;UBERON:0004571!3.16e-07!33;UBERON:0004237!5.49e-07!10;UBERON:0004695!5.49e-07!10;UBERON:0002111!5.49e-07!10;UBERON:0004178!5.49e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;3.46e-12;4!UBERON:0004237;6.59e-11;10!UBERON:0004695;6.59e-11;10!UBERON:0002111;6.59e-11;10!UBERON:0004178;6.59e-11;10!UBERON:0000947;4.03e-08;21!UBERON:0010191;4.03e-08;21!UBERON:0005629;4.69e-07;2!UBERON:0005358;4.69e-07;2!UBERON:0001886;4.69e-07;2!UBERON:0004086;4.69e-07;2!UBERON:0005282;4.69e-07;2!UBERON:0005281;4.69e-07;2!UBERON:0001135;5.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,4.52e-12,4;UBERON:0001637,8.58e-11,42;UBERON:0003509,8.58e-11,42;UBERON:0004572,8.58e-11,42;UBERON:0004237,8.76e-11,10;UBERON:0004695,8.76e-11,10;UBERON:0002111,8.76e-11,10;UBERON:0004178,8.76e-11,10;UBERON:0002049,3.72e-09,78;UBERON:0007798,3.72e-09,78;UBERON:0000947,3.97e-08,21;UBERON:0010191,3.97e-08,21;UBERON:0007503,5.18e-08,78;UBERON:0007500,6.70e-08,59;UBERON:0001981,6.70e-08,59;UBERON:0004537,6.70e-08,59;UBERON:0006965,6.70e-08,59;UBERON:0007524,8.74e-08,73;UBERON:0005629,2.61e-07,2;UBERON:0005358,2.61e-07,2;UBERON:0001886,2.61e-07,2;UBERON:0004086,2.61e-07,2;UBERON:0005282,2.61e-07,2;UBERON:0005281,2.61e-07,2;UBERON:0002329,4.65e-07,71;UBERON:0003059,4.65e-07,71;UBERON:0007282,4.65e-07,71;UBERON:0004290,4.65e-07,71;UBERON:0009618,4.65e-07,71;UBERON:0001135,6.22e-07,15;UBERON:0003077,6.52e-07,72;UBERON:0007285,6.52e-07,72;UBERON:0004535,7.11e-07,109 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0.662794751455832,1.34465029290355,0,0.730310090387373,0.487932798790507,0.246242116153576,0.408001382488506,0.940364164434263,0,0,0,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0.886917589850256,1.05401742831751,1.24430121722827,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.2663051166458,1.85372853138506,0,0.354668382198357,1.12135520028461,0,1.97334038733728,0,0,0,1.81628913173918,2.30470369792,0.234321431833797,0.624320153660641,0,0.747243402759005,0.23486899728753,0.161872944368132,0,0,0.61417158655884,0.309977343527296,0,0.741800787835671,0,0,0.168336113954066,0.375355559615893,0,0,0.612975591598039,1.05166641234618,0,0.358779271377724,0.85422955527427,0.211931901159562,1.20036438433761,0.412210116953756,0,0,0.337552664482532,0.487185025805993,0,0.368199594569197,0,1.06502877754984,0.503760491138201,0.339121184620975,0,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.857839051492628,0.219500570817251,0,0.502644862058154,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.784917590417525,3.92364061949952,1.7601188597028,0.646358578788889,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.899756920638513,0,0,0,0.239624855491583,1.14861935834114,1.42636905040718,0.289562613335158,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,1.03985430765404,0.892144943985809,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,6.63729006750131,0.0868836144680828,27.6079632022464,26.078900209625,0,0,0,0,0,0.907170879989041,0,0.61384789315225,0.841980283299221,0.384417447767103,0,1.76939313257968,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0,1.20303882181971,0.0920809889358963,0,0,0.131124414959424,0,0.308061348417659,0,0,0,0,0,0.647747748306418,0,1.08378575017541,1.50506932156456,0,0,0.223874754722178,0,0,1.28225062558195,0,0.325378394664303,0,0.27470839445503,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0,0,0,0.170453254832202,0.178064071293475,0.330569830721956,0.192190067365106,0,0.2023155617111,7.43752878875657,3.77774816196768,4.1822236209636,0.308033580176089,1.06461206063404,3.47973196830029,0.18532421910392,0,6.32669227911434,0.949138274156178,0.190630193923825,0.511795582622668,0.42793898803392,0.636406495851874,0,0,0,0.117812402345686,0.808729926293264,0,0.421258456238981,0.48763373908959,0.487426979262569,2.11300293513511,0,0,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,1.01455188481352,3.717881977197,1.40847801266121,0.143411352204052,0.0982490410131212,1.426684205925,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0,0.139423744278603,0,0.341826167541004,0.46112780877612,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0.485560759068186,0,0,0,0.758238955541855,0.901940516486955,0.207376382794494,0.664653872707185,1.65495977937749,0.313932918407225,0,0,0.138674673013139,0.520679215005393,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0.176512253383001,0.451961481561065,3.42604811616877,1.78843150532691,0.0633107959558787,0,0.561111741760736,0,0,0.144090417154106,0.458146384663663,1.20116498503375,0.288109595976299,0.372757606696298,0.235694034616795,0.271808412147228,0.313808538937,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0,0.0524545881349981,1.26720403823288,0.35857467866569,0,0,0,0,1.08599920350743,1.72844298240254,0.326587360109409,0,0,0.340776043570843,0.566560457600628,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0.15164911754164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| ||
|short_description=p5@FOXD1 | |short_description=p5@FOXD1 | ||
}} | }} |
Latest revision as of 16:01, 18 September 2015
Short description: | p5@FOXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXD1_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 0bp_to_ENST00000328926, NM_004472, uc003kcp.2_5end |
EntrezGene: | FOXD1 |
HGNC: | 3802 |
UniProt: | Q16676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.67e-13 | 32 |
pericyte cell | 7.56e-13 | 4 |
smooth muscle cell of the umbilical artery | 4.52e-12 | 4 |
aortic smooth muscle cell | 8.76e-11 | 10 |
smooth muscle cell | 5.02e-09 | 43 |
smooth muscle myoblast | 5.02e-09 | 43 |
central nervous system pericyte | 6.90e-08 | 2 |
muscle cell | 1.41e-07 | 55 |
bone matrix secreting cell | 2.53e-07 | 2 |
osteocyte | 2.53e-07 | 2 |
osteoclast | 2.53e-07 | 2 |
fibroblast of choroid plexus | 2.61e-07 | 2 |
muscle precursor cell | 5.01e-07 | 58 |
myoblast | 5.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.53e-07 | 2 |
bone giant cell tumor | 2.53e-07 | 2 |
benign neoplasm | 3.24e-07 | 4 |