FFCP PHASE1:Hg19::chr5:72416387..72416409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134285 | |EntrezGene=134285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27031 | |HGNC=27031 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVE6 | |UniProt=Q8WVE6 | ||
|association_with_transcript=0bp_to_ENST00000287773,NM_001161342,NM_173490,uc003kcm.2,uc003kcn.3_5end | |association_with_transcript=0bp_to_ENST00000287773,NM_001161342,NM_173490,uc003kcm.2,uc003kcn.3_5end | ||
|cluster_id=chr5:72416387..72416409,+ | |||
|coexpression_cluster_id=C4517 | |||
|description=CAGE_peak_1_at_TMEM171_5end | |description=CAGE_peak_1_at_TMEM171_5end | ||
|id=chr5:72416387..72416409,+ | |id=chr5:72416387..72416409,+ | ||
|ontology_enrichment_celltype=CL:0000222!2.15e-22!119;CL:0000055!1.89e-21!180;CL:0000359!6.86e-17!32;CL:0000220!1.19e-15!246;CL:0002321!1.30e-15!248;CL:0000183!1.98e-15!59;CL:0000680!1.23e-14!57;CL:0000056!1.23e-14!57;CL:0000355!1.23e-14!57;CL:0000057!1.84e-14!75;CL:0000192!6.08e-14!42;CL:0000514!6.08e-14!42;CL:0000187!2.44e-13!54;CL:0000393!7.98e-11!60;CL:0000211!7.98e-11!60;CL:0000076!1.73e-08!62;CL:0000071!9.45e-08!18;CL:0002546!9.45e-08!18;CL:0000213!1.71e-07!57;CL:0000215!1.71e-07!57;CL:0002539!2.07e-07!10;CL:0002139!4.73e-07!24 | |ontology_enrichment_celltype=CL:0000222!2.15e-22!119;CL:0000055!1.89e-21!180;CL:0000359!6.86e-17!32;CL:0000220!1.19e-15!246;CL:0002321!1.30e-15!248;CL:0000183!1.98e-15!59;CL:0000680!1.23e-14!57;CL:0000056!1.23e-14!57;CL:0000355!1.23e-14!57;CL:0000057!1.84e-14!75;CL:0000192!6.08e-14!42;CL:0000514!6.08e-14!42;CL:0000187!2.44e-13!54;CL:0000393!7.98e-11!60;CL:0000211!7.98e-11!60;CL:0000076!1.73e-08!62;CL:0000071!9.45e-08!18;CL:0002546!9.45e-08!18;CL:0000213!1.71e-07!57;CL:0000215!1.71e-07!57;CL:0002539!2.07e-07!10;CL:0002139!4.73e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.87e-18;32!CL:0000192;4.56e-10;43!CL:0002539;2.23e-08;10!CL:0000071;3.31e-08;18!CL:1000413;5.22e-07;9!CL:0000187;6.11e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.78e-21,121;CL:0000359,1.17e-18,32;CL:0000057,5.47e-15,76;CL:0000680,1.31e-13,58;CL:0000056,1.31e-13,58;CL:0000355,1.31e-13,58;CL:0000192,5.84e-13,43;CL:0000514,5.84e-13,43;CL:0000187,3.37e-12,55;CL:0002321,3.64e-11,250;CL:0000393,2.19e-09,61;CL:0000211,2.19e-09,61;CL:0000076,3.45e-09,63;CL:0002539,2.30e-08,10;CL:0000071,2.91e-08,18;CL:0002546,2.91e-08,18;CL:0000213,2.29e-07,58;CL:0000215,2.29e-07,58;CL:1000413,5.68e-07,9;CL:0002139,8.79e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;4.56e-10;43!CL:0002546;3.31e-08;18!CL:0000355;2.02e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!5.09e-22!42;UBERON:0003509!5.09e-22!42;UBERON:0004572!5.09e-22!42;UBERON:0004872!1.55e-20!84;UBERON:0002049!4.35e-20!79;UBERON:0007798!4.35e-20!79;UBERON:0001981!5.05e-19!60;UBERON:0007500!5.05e-19!60;UBERON:0004537!5.05e-19!60;UBERON:0006965!5.05e-19!60;UBERON:0000055!7.47e-19!69;UBERON:0000119!8.27e-18!312;UBERON:0000486!4.02e-17!82;UBERON:0000914!8.58e-17!83;UBERON:0002329!8.58e-17!83;UBERON:0003077!8.58e-17!83;UBERON:0003059!8.58e-17!83;UBERON:0007282!8.58e-17!83;UBERON:0009618!8.58e-17!83;UBERON:0007285!8.58e-17!83;UBERON:0004573!1.00e-16!33;UBERON:0004571!1.00e-16!33;UBERON:0000483!1.11e-16!309;UBERON:0003914!1.31e-16!118;UBERON:0004290!3.12e-16!70;UBERON:0000490!1.13e-14!138;UBERON:0005256!6.40e-14!143;UBERON:0000475!1.86e-13!365;UBERON:0004535!3.27e-13!110;UBERON:0001134!9.17e-13!61;UBERON:0002036!9.17e-13!61;UBERON:0003082!9.17e-13!61;UBERON:0002385!1.30e-12!63;UBERON:0001015!1.30e-12!63;UBERON:0000383!1.30e-12!63;UBERON:0001009!2.11e-12!113;UBERON:0000481!3.25e-12!347;UBERON:0000477!3.70e-12!286;UBERON:0000468!6.00e-12!659;UBERON:0002100!7.14e-12!216;UBERON:0004111!5.42e-11!241;UBERON:0000467!6.26e-11!625;UBERON:0000480!1.06e-10!626;UBERON:0000947!2.18e-10!21;UBERON:0010191!2.18e-10!21;UBERON:0000025!5.90e-10!194;UBERON:0003104!1.92e-08!238;UBERON:0009142!1.92e-08!238;UBERON:0001986!9.45e-08!18;UBERON:0004638!9.45e-08!18;UBERON:0004852!9.45e-08!18;UBERON:0000922!1.28e-07!612;UBERON:0004237!2.07e-07!10;UBERON:0004695!2.07e-07!10;UBERON:0002111!2.07e-07!10;UBERON:0004178!2.07e-07!10;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002050!2.67e-07!605;UBERON:0005423!2.67e-07!605;UBERON:0000487!6.21e-07!22;UBERON:0006914!7.89e-07!25 | |ontology_enrichment_uberon=UBERON:0001637!5.09e-22!42;UBERON:0003509!5.09e-22!42;UBERON:0004572!5.09e-22!42;UBERON:0004872!1.55e-20!84;UBERON:0002049!4.35e-20!79;UBERON:0007798!4.35e-20!79;UBERON:0001981!5.05e-19!60;UBERON:0007500!5.05e-19!60;UBERON:0004537!5.05e-19!60;UBERON:0006965!5.05e-19!60;UBERON:0000055!7.47e-19!69;UBERON:0000119!8.27e-18!312;UBERON:0000486!4.02e-17!82;UBERON:0000914!8.58e-17!83;UBERON:0002329!8.58e-17!83;UBERON:0003077!8.58e-17!83;UBERON:0003059!8.58e-17!83;UBERON:0007282!8.58e-17!83;UBERON:0009618!8.58e-17!83;UBERON:0007285!8.58e-17!83;UBERON:0004573!1.00e-16!33;UBERON:0004571!1.00e-16!33;UBERON:0000483!1.11e-16!309;UBERON:0003914!1.31e-16!118;UBERON:0004290!3.12e-16!70;UBERON:0000490!1.13e-14!138;UBERON:0005256!6.40e-14!143;UBERON:0000475!1.86e-13!365;UBERON:0004535!3.27e-13!110;UBERON:0001134!9.17e-13!61;UBERON:0002036!9.17e-13!61;UBERON:0003082!9.17e-13!61;UBERON:0002385!1.30e-12!63;UBERON:0001015!1.30e-12!63;UBERON:0000383!1.30e-12!63;UBERON:0001009!2.11e-12!113;UBERON:0000481!3.25e-12!347;UBERON:0000477!3.70e-12!286;UBERON:0000468!6.00e-12!659;UBERON:0002100!7.14e-12!216;UBERON:0004111!5.42e-11!241;UBERON:0000467!6.26e-11!625;UBERON:0000480!1.06e-10!626;UBERON:0000947!2.18e-10!21;UBERON:0010191!2.18e-10!21;UBERON:0000025!5.90e-10!194;UBERON:0003104!1.92e-08!238;UBERON:0009142!1.92e-08!238;UBERON:0001986!9.45e-08!18;UBERON:0004638!9.45e-08!18;UBERON:0004852!9.45e-08!18;UBERON:0000922!1.28e-07!612;UBERON:0004237!2.07e-07!10;UBERON:0004695!2.07e-07!10;UBERON:0002111!2.07e-07!10;UBERON:0004178!2.07e-07!10;UBERON:0000923!2.49e-07!604;UBERON:0005291!2.49e-07!604;UBERON:0006598!2.49e-07!604;UBERON:0002532!2.49e-07!604;UBERON:0002050!2.67e-07!605;UBERON:0005423!2.67e-07!605;UBERON:0000487!6.21e-07!22;UBERON:0006914!7.89e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.82e-18;42!UBERON:0003509;1.82e-18;42!UBERON:0004572;1.82e-18;42!UBERON:0004573;5.60e-18;33!UBERON:0004571;5.60e-18;33!UBERON:0007500;2.01e-13;56!UBERON:0001981;2.01e-13;56!UBERON:0004537;2.01e-13;56!UBERON:0000947;3.94e-12;21!UBERON:0010191;3.94e-12;21!UBERON:0003914;7.52e-12;74!UBERON:0000055;9.50e-11;65!UBERON:0002049;2.57e-09;75!UBERON:0007798;2.57e-09;75!UBERON:0004237;2.23e-08;10!UBERON:0004695;2.23e-08;10!UBERON:0002111;2.23e-08;10!UBERON:0004178;2.23e-08;10!UBERON:0004638;3.31e-08;18!UBERON:0001986;3.31e-08;18!UBERON:0004852;3.31e-08;18!UBERON:0000487;3.63e-07;22!UBERON:0006914;5.12e-07;25!UBERON:0003915;5.22e-07;9!UBERON:0004700;5.22e-07;9!UBERON:0001917;5.22e-07;9!UBERON:0000025;7.64e-07;93 | |||
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| ||
|short_description=p1@TMEM171 | |short_description=p1@TMEM171 | ||
}} | }} |
Latest revision as of 15:50, 18 September 2015
Short description: | p1@TMEM171 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM171_5end |
Coexpression cluster: | C4517_Smooth_mesenchymal_colon_Meningeal_large_Preadipocyte_Fibroblast |
Association with transcript: | 0bp_to_ENST00000287773, NM_001161342, NM_173490, uc003kcm.2, uc003kcn.3_5end |
EntrezGene: | TMEM171 |
HGNC: | 27031 |
UniProt: | Q8WVE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.78e-21 | 121 |
vascular associated smooth muscle cell | 1.17e-18 | 32 |
fibroblast | 5.47e-15 | 76 |
muscle precursor cell | 1.31e-13 | 58 |
myoblast | 1.31e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-13 | 58 |
smooth muscle cell | 5.84e-13 | 43 |
smooth muscle myoblast | 5.84e-13 | 43 |
muscle cell | 3.37e-12 | 55 |
embryonic cell | 3.64e-11 | 250 |
electrically responsive cell | 2.19e-09 | 61 |
electrically active cell | 2.19e-09 | 61 |
squamous epithelial cell | 3.45e-09 | 63 |
aortic smooth muscle cell | 2.30e-08 | 10 |
blood vessel endothelial cell | 2.91e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.91e-08 | 18 |
lining cell | 2.29e-07 | 58 |
barrier cell | 2.29e-07 | 58 |
endothelial cell of artery | 5.68e-07 | 9 |
endothelial cell of vascular tree | 8.79e-07 | 24 |