FFCP PHASE1:Hg19::chr5:52781392..52781394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:52781392..52781394,+ | |||
|description=CAGE_peak_at_chr5:52781392..52781394,+ | |description=CAGE_peak_at_chr5:52781392..52781394,+ | ||
|id=chr5:52781392..52781394,+ | |id=chr5:52781392..52781394,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.80e-18!75;CL:0002620!8.47e-16!23;CL:0000055!5.83e-12!180;CL:0000548!4.26e-08!679;CL:0000004!4.26e-08!679;CL:0000255!4.26e-08!679;CL:0000012!6.95e-08!682 | |ontology_enrichment_celltype=CL:0000057!4.80e-18!75;CL:0002620!8.47e-16!23;CL:0000055!5.83e-12!180;CL:0000548!4.26e-08!679;CL:0000004!4.26e-08!679;CL:0000255!4.26e-08!679;CL:0000012!6.95e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.14e-13;13!CL:0002202;3.64e-13;9!CL:0002632;3.64e-13;9!CL:0002328;1.01e-10;3!CL:0000307;1.16e-10;3!CL:0002574;3.82e-08;1!CL:1000306;5.63e-08;4!CL:0002547;5.63e-08;4!CL:0002620;2.51e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.37e-13,13;CL:0002202,3.65e-13,9;CL:0002632,3.65e-13,9;CL:0002328,9.62e-11,3;CL:0000068,1.22e-10,3;CL:0000069,1.22e-10,3;CL:0000307,1.22e-10,3;CL:0000377,1.22e-10,3;CL:0002574,2.89e-08,1;CL:1000306,6.48e-08,4;CL:0002547,6.48e-08,4;CL:0002620,2.10e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000377;1.16e-10;3 | |||
|ontology_enrichment_disease=DOID:17!4.75e-07!5;DOID:450!4.75e-07!5;DOID:66!4.75e-07!5;DOID:423!4.75e-07!5;DOID:0080000!4.75e-07!5;DOID:11722!4.75e-07!5 | |ontology_enrichment_disease=DOID:17!4.75e-07!5;DOID:450!4.75e-07!5;DOID:66!4.75e-07!5;DOID:423!4.75e-07!5;DOID:0080000!4.75e-07!5;DOID:11722!4.75e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.37e-18!95;UBERON:0002097!4.14e-14!40;UBERON:0002199!4.93e-14!45;UBERON:0002416!4.93e-14!45 | |ontology_enrichment_uberon=UBERON:0003102!3.37e-18!95;UBERON:0002097!4.14e-14!40;UBERON:0002199!4.93e-14!45;UBERON:0002416!4.93e-14!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.01e-10;3!UBERON:0002031;1.01e-10;3!UBERON:0002134;3.82e-08;1!UBERON:0005208;3.82e-08;1!UBERON:0004145;3.82e-08;1!UBERON:0005946;3.82e-08;1!UBERON:0005965;3.82e-08;1!UBERON:0002078;3.82e-08;1!UBERON:0004797;5.63e-08;4!UBERON:0000415;5.63e-08;4!UBERON:0007240;5.63e-08;4!UBERON:0005742;5.63e-08;4!UBERON:0005734;5.63e-08;4!UBERON:0004664;5.63e-08;4!UBERON:0004663;5.63e-08;4!UBERON:0007196;6.14e-08;15!UBERON:0001558;6.14e-08;15!UBERON:0002185;9.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,9.62e-11,3;UBERON:0002031,9.62e-11,3;UBERON:0004797,1.67e-09,7;UBERON:0002134,3.10e-08,1;UBERON:0005208,3.10e-08,1;UBERON:0005946,3.10e-08,1;UBERON:0005965,3.10e-08,1;UBERON:0002078,3.10e-08,1;UBERON:0007196,6.15e-08,15;UBERON:0001558,6.15e-08,15;UBERON:0000415,6.48e-08,4;UBERON:0007240,6.48e-08,4;UBERON:0005742,6.48e-08,4;UBERON:0005734,6.48e-08,4;UBERON:0004664,6.48e-08,4;UBERON:0004663,6.48e-08,4;UBERON:0002097,2.16e-07,41;UBERON:0002185,9.07e-07,5 | |||
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| ||
|short_description=p@chr5:52781392..52781394,+ | |short_description=p@chr5:52781392..52781394,+ | ||
}} | }} |
Latest revision as of 15:11, 30 July 2015
Short description: | p@chr5:52781392..52781394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52781392..52781394, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.37e-13 | 13 |
epithelial cell of tracheobronchial tree | 3.65e-13 | 9 |
epithelial cell of lower respiratory tract | 3.65e-13 | 9 |
bronchial epithelial cell | 9.62e-11 | 3 |
duct epithelial cell | 1.22e-10 | 3 |
branched duct epithelial cell | 1.22e-10 | 3 |
tracheal epithelial cell | 1.22e-10 | 3 |
tracheoblast | 1.22e-10 | 3 |
stromal cell of pancreas | 2.89e-08 | 1 |
fibroblast of tunica adventitia of artery | 6.48e-08 | 4 |
fibroblast of the aortic adventitia | 6.48e-08 | 4 |
skin fibroblast | 2.10e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 9.62e-11 | 3 |
epithelium of bronchus | 9.62e-11 | 3 |
blood vessel layer | 1.67e-09 | 7 |
tricuspid valve | 3.10e-08 | 1 |
right atrium valve | 3.10e-08 | 1 |
outflow tract of atrium | 3.10e-08 | 1 |
outflow part of right atrium | 3.10e-08 | 1 |
right cardiac atrium | 3.10e-08 | 1 |
tracheobronchial tree | 6.15e-08 | 15 |
lower respiratory tract | 6.15e-08 | 15 |
artery wall | 6.48e-08 | 4 |
tunica adventitia of artery | 6.48e-08 | 4 |
adventitia | 6.48e-08 | 4 |
tunica adventitia of blood vessel | 6.48e-08 | 4 |
aorta tunica adventitia | 6.48e-08 | 4 |
aorta wall | 6.48e-08 | 4 |
skin of body | 2.16e-07 | 41 |
bronchus | 9.07e-07 | 5 |