FFCP PHASE1:Hg19::chr5:35991458..35991478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133688 | |EntrezGene=133688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26625 | |HGNC=26625 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8Q8,A8K444 | |UniProt=B7Z8Q8,A8K444 | ||
|association_with_transcript=20bp_to_ENST00000503189,uc003jjv.1,uc011coq.1,uc011cor.1_5end | |association_with_transcript=20bp_to_ENST00000503189,uc003jjv.1,uc011coq.1,uc011cor.1_5end | ||
|cluster_id=chr5:35991458..35991478,- | |||
|coexpression_cluster_id=C1009 | |||
|description=CAGE_peak_1_at_UGT3A1_5end | |description=CAGE_peak_1_at_UGT3A1_5end | ||
|id=chr5:35991458..35991478,- | |id=chr5:35991458..35991478,- | ||
|ontology_enrichment_celltype=CL:0002322!2.64e-08!5 | |ontology_enrichment_celltype=CL:0002322!2.64e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.04e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.04e-08;10!UBERON:0007687;1.04e-08;10!UBERON:0003104;2.50e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!6.07e-18!4;UBERON:0010133!6.07e-18!4;UBERON:0001894!2.60e-10!7;UBERON:0006222!2.60e-10!7;UBERON:0001905!4.63e-10!2;UBERON:0002757!4.63e-10!2;UBERON:0010134!4.63e-10!2;UBERON:0002784!4.63e-10!2;UBERON:0005408!4.63e-10!2;UBERON:0001899!4.63e-10!2;UBERON:0001630!5.07e-10!2;UBERON:0005090!5.07e-10!2;UBERON:0000007!1.30e-09!2;UBERON:0002368!5.20e-09!35 | |ontology_enrichment_uberon=UBERON:0003296!6.07e-18!4;UBERON:0010133!6.07e-18!4;UBERON:0001894!2.60e-10!7;UBERON:0006222!2.60e-10!7;UBERON:0001905!4.63e-10!2;UBERON:0002757!4.63e-10!2;UBERON:0010134!4.63e-10!2;UBERON:0002784!4.63e-10!2;UBERON:0005408!4.63e-10!2;UBERON:0001899!4.63e-10!2;UBERON:0001630!5.07e-10!2;UBERON:0005090!5.07e-10!2;UBERON:0000007!1.30e-09!2;UBERON:0002368!5.20e-09!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.95e-16;4!UBERON:0000160;8.72e-12;17!UBERON:0002426;1.03e-09;1!UBERON:0003831;1.03e-09;1!UBERON:0003898;1.03e-09;1!UBERON:0004830;1.03e-09;1!UBERON:0003830;1.03e-09;1!UBERON:0005175;1.03e-09;1!UBERON:0001774;1.03e-09;1!UBERON:0001103;1.03e-09;1!UBERON:0005409;3.41e-09;22!UBERON:0002107;9.68e-08;19!UBERON:0006925;9.68e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.03e-16,4;UBERON:0000160,9.24e-12,17;UBERON:0002426,9.82e-10,1;UBERON:0003831,9.82e-10,1;UBERON:0003898,9.82e-10,1;UBERON:0004830,9.82e-10,1;UBERON:0003830,9.82e-10,1;UBERON:0005175,9.82e-10,1;UBERON:0001774,9.82e-10,1;UBERON:0001103,9.82e-10,1;UBERON:0010084,9.82e-10,1;UBERON:0005409,4.26e-08,25;UBERON:0002107,9.68e-08,19;UBERON:0006925,9.68e-08,19;UBERON:0008836,9.68e-08,19;UBERON:0005172,2.15e-07,54;UBERON:0005173,2.15e-07,54 | |||
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|short_description=p1@UGT3A1 | |short_description=p1@UGT3A1 | ||
}} | }} |
Latest revision as of 18:51, 17 September 2015
Short description: | p1@UGT3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UGT3A1_5end |
Coexpression cluster: | C1009_kidney_liver_renal_Hepatocyte_small_temporal_pineal |
Association with transcript: | 20bp_to_ENST00000503189, uc003jjv.1, uc011coq.1, uc011cor.1_5end |
EntrezGene: | UGT3A1 |
HGNC: | 26625 |
UniProt: | B7Z8Q8A8K444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.03e-16 | 4 |
intestine | 9.24e-12 | 17 |
chest muscle | 9.82e-10 | 1 |
respiratory system muscle | 9.82e-10 | 1 |
skeletal muscle of trunk | 9.82e-10 | 1 |
respiratory system skeletal muscle | 9.82e-10 | 1 |
thoracic segment muscle | 9.82e-10 | 1 |
chest organ | 9.82e-10 | 1 |
muscle of trunk | 9.82e-10 | 1 |
diaphragm | 9.82e-10 | 1 |
future diaphragm | 9.82e-10 | 1 |
gastrointestinal system | 4.26e-08 | 25 |
liver | 9.68e-08 | 19 |
digestive gland | 9.68e-08 | 19 |
liver bud | 9.68e-08 | 19 |
abdomen element | 2.15e-07 | 54 |
abdominal segment element | 2.15e-07 | 54 |