FFCP PHASE1:Hg19::chr5:27217822..27217828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:27217822..27217828,+ | |||
|description=CAGE_peak_at_chr5:27217822..27217828,+ | |description=CAGE_peak_at_chr5:27217822..27217828,+ | ||
|id=chr5:27217822..27217828,+ | |id=chr5:27217822..27217828,+ | ||
|ontology_enrichment_celltype=CL:0002149!2.04e-16!6;CL:0002255!2.04e-16!6;CL:0000159!5.11e-09!2;CL:0000223!3.09e-08!59 | |ontology_enrichment_celltype=CL:0002149!2.04e-16!6;CL:0002255!2.04e-16!6;CL:0000159!5.11e-09!2;CL:0000223!3.09e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002149;4.34e-22;6!CL:0002255;4.34e-22;6!CL:0000319;6.31e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,4.22e-22,6;CL:0002255,4.22e-22,6;CL:0000319,6.31e-10,1;CL:0000223,5.21e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.81e-08;10 | |||
|ontology_enrichment_disease=DOID:14566!6.64e-26!239;DOID:162!8.29e-24!235;DOID:0050687!7.88e-20!143;DOID:305!4.52e-18!106;DOID:3001!2.04e-16!6;DOID:1036!6.80e-13!8;DOID:0050686!1.08e-12!137;DOID:299!5.16e-11!25;DOID:1749!2.90e-09!14;DOID:4074!1.03e-08!2;DOID:4905!1.03e-08!2;DOID:3498!1.03e-08!2;DOID:7!4.02e-08!39;DOID:120!6.51e-08!27;DOID:193!2.80e-07!29;DOID:2531!3.07e-07!51;DOID:0060083!3.07e-07!51 | |ontology_enrichment_disease=DOID:14566!6.64e-26!239;DOID:162!8.29e-24!235;DOID:0050687!7.88e-20!143;DOID:305!4.52e-18!106;DOID:3001!2.04e-16!6;DOID:1036!6.80e-13!8;DOID:0050686!1.08e-12!137;DOID:299!5.16e-11!25;DOID:1749!2.90e-09!14;DOID:4074!1.03e-08!2;DOID:4905!1.03e-08!2;DOID:3498!1.03e-08!2;DOID:7!4.02e-08!39;DOID:120!6.51e-08!27;DOID:193!2.80e-07!29;DOID:2531!3.07e-07!51;DOID:0060083!3.07e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.11e-26;8!DOID:3001;4.34e-22;6!DOID:0060085;4.09e-10;1!DOID:3165;4.09e-10;1!DOID:0060121;4.09e-10;1!DOID:2438;4.09e-10;1!DOID:4418;4.09e-10;1!DOID:3030;6.31e-10;1!DOID:8692;1.07e-09;31!DOID:5662;1.76e-09;1!DOID:2355;1.76e-09;1!DOID:1240;1.43e-08;39!DOID:2531;2.62e-08;51!DOID:0060083;2.62e-08;51!DOID:299;4.37e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.95e-26,8;DOID:3001,4.22e-22,6;DOID:162,7.59e-17,235;DOID:14566,2.01e-16,239;DOID:2531,4.58e-12,51;DOID:0060083,4.58e-12,51;DOID:0050686,5.94e-11,137;DOID:0060085,4.09e-10,1;DOID:3165,4.09e-10,1;DOID:0060121,4.09e-10,1;DOID:2438,4.09e-10,1;DOID:4418,4.09e-10,1;DOID:3030,6.31e-10,1;DOID:1240,7.54e-10,39;DOID:5662,1.62e-09,1;DOID:2355,1.91e-09,1;DOID:8692,2.25e-09,31;DOID:305,4.02e-09,106;DOID:0050687,7.20e-09,143;DOID:299,4.31e-08,25;DOID:7,3.21e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;7.50e-10;1!UBERON:0009842;7.50e-10;1!UBERON:0003704;7.50e-10;1!UBERON:0001171;7.50e-10;1!UBERON:0001172;7.50e-10;1!UBERON:0000995;6.26e-08;17!UBERON:0003975;1.70e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.50e-10,1;UBERON:0009842,7.50e-10,1;UBERON:0003704,7.50e-10,1;UBERON:0001171,7.50e-10,1;UBERON:0001172,7.50e-10,1 | |||
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| ||
|short_description=p@chr5:27217822..27217828,+ | |short_description=p@chr5:27217822..27217828,+ | ||
}} | }} |
Latest revision as of 14:14, 30 July 2015
Short description: | p@chr5:27217822..27217828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:27217822..27217828, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 4.22e-22 | 6 |
stromal cell of endometrium | 4.22e-22 | 6 |
mucus secreting cell | 6.31e-10 | 1 |
endodermal cell | 5.21e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.50e-10 | 1 |
acinus | 7.50e-10 | 1 |
intrahepatic bile duct | 7.50e-10 | 1 |
portal lobule | 7.50e-10 | 1 |
hepatic acinus | 7.50e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.95e-26 | 8 |
female reproductive endometrioid cancer | 4.22e-22 | 6 |
cancer | 7.59e-17 | 235 |
disease of cellular proliferation | 2.01e-16 | 239 |
hematologic cancer | 4.58e-12 | 51 |
immune system cancer | 4.58e-12 | 51 |
organ system cancer | 5.94e-11 | 137 |
organ system benign neoplasm | 4.09e-10 | 1 |
skin benign neoplasm | 4.09e-10 | 1 |
integumentary system benign neoplasm | 4.09e-10 | 1 |
dermis tumor | 4.09e-10 | 1 |
cutaneous fibrous histiocytoma | 4.09e-10 | 1 |
mucinous adenocarcinoma | 6.31e-10 | 1 |
leukemia | 7.54e-10 | 39 |
pleomorphic carcinoma | 1.62e-09 | 1 |
anemia | 1.91e-09 | 1 |
myeloid leukemia | 2.25e-09 | 31 |
carcinoma | 4.02e-09 | 106 |
cell type cancer | 7.20e-09 | 143 |
adenocarcinoma | 4.31e-08 | 25 |
disease of anatomical entity | 3.21e-07 | 39 |