FFCP PHASE1:Hg19::chr5:180018695..180018706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QR1 | |UniProt=Q96QR1 | ||
|association_with_transcript=-155bp_to_ENST00000292641_5end | |association_with_transcript=-155bp_to_ENST00000292641_5end | ||
|cluster_id=chr5:180018695..180018706,- | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_9_at_SCGB3A1_5end | |description=CAGE_peak_9_at_SCGB3A1_5end | ||
|id=chr5:180018695..180018706,- | |id=chr5:180018695..180018706,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.64e-26;1!UBERON:0006965;1.29e-13;2!UBERON:0008947;1.88e-08;29!UBERON:0006595;6.68e-07;86 | |||
|ontology_enrichment_disease=DOID:178!1.25e-09!1;DOID:326!1.25e-09!1;DOID:3978!1.25e-09!1;DOID:3394!1.25e-09!1;DOID:5844!1.25e-09!1 | |ontology_enrichment_disease=DOID:178!1.25e-09!1;DOID:326!1.25e-09!1;DOID:3978!1.25e-09!1;DOID:3394!1.25e-09!1;DOID:5844!1.25e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.59e-18!2;UBERON:0000341!3.16e-18!2;UBERON:0007023!7.82e-16!115;UBERON:0002171!4.87e-10!1;UBERON:0006518!4.87e-10!1;UBERON:0008949!4.87e-10!1;UBERON:0000101!4.87e-10!1;UBERON:0002167!4.87e-10!1;UBERON:0001736!8.17e-10!1;UBERON:0006298!8.17e-10!1;UBERON:0002372!1.06e-09!1;UBERON:0001961!1.06e-09!1;UBERON:0001744!1.06e-09!1;UBERON:0001735!1.06e-09!1;UBERON:0001882!1.91e-09!1;UBERON:0005403!1.91e-09!1;UBERON:0002581!2.46e-09!1 | |ontology_enrichment_uberon=UBERON:0003127!1.59e-18!2;UBERON:0000341!3.16e-18!2;UBERON:0007023!7.82e-16!115;UBERON:0002171!4.87e-10!1;UBERON:0006518!4.87e-10!1;UBERON:0008949!4.87e-10!1;UBERON:0000101!4.87e-10!1;UBERON:0002167!4.87e-10!1;UBERON:0001736!8.17e-10!1;UBERON:0006298!8.17e-10!1;UBERON:0002372!1.06e-09!1;UBERON:0001961!1.06e-09!1;UBERON:0001744!1.06e-09!1;UBERON:0001735!1.06e-09!1;UBERON:0001882!1.91e-09!1;UBERON:0005403!1.91e-09!1;UBERON:0002581!2.46e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;8.82e-51;2!UBERON:0000341;5.15e-50;2!UBERON:0002171;4.06e-26;1!UBERON:0006518;4.06e-26;1!UBERON:0008949;4.06e-26;1!UBERON:0000101;4.06e-26;1!UBERON:0002167;4.06e-26;1!UBERON:0000974;1.85e-17;6!UBERON:0003126;2.47e-15;7!UBERON:0001005;2.47e-15;7!UBERON:0002110;1.60e-09;3!UBERON:0007196;1.15e-07;15!UBERON:0001558;1.15e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,8.82e-51,2;UBERON:0000341,6.61e-50,2;UBERON:0002171,4.61e-26,1;UBERON:0006518,4.61e-26,1;UBERON:0008949,4.61e-26,1;UBERON:0000101,4.61e-26,1;UBERON:0002167,4.61e-26,1;UBERON:0003126,2.47e-15,7;UBERON:0001005,2.47e-15,7;UBERON:0000974,7.30e-11,10;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0007023,6.48e-08,114;UBERON:0007196,1.15e-07,15;UBERON:0001558,1.15e-07,15;UBERON:0005178,2.71e-07,34;UBERON:0002224,2.71e-07,34;UBERON:0005181,4.21e-07,35 | |||
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|short_description=p9@SCGB3A1 | |short_description=p9@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:45, 17 September 2015
Short description: | p9@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | -155bp_to_ENST00000292641_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | Q96QR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 8.82e-51 | 2 |
throat | 6.61e-50 | 2 |
lower lobe of right lung | 4.61e-26 | 1 |
right lung lobe | 4.61e-26 | 1 |
lower lobe of lung | 4.61e-26 | 1 |
lobe of lung | 4.61e-26 | 1 |
right lung | 4.61e-26 | 1 |
trachea | 2.47e-15 | 7 |
respiratory airway | 2.47e-15 | 7 |
neck | 7.30e-11 | 10 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
adult organism | 6.48e-08 | 114 |
tracheobronchial tree | 1.15e-07 | 15 |
lower respiratory tract | 1.15e-07 | 15 |
thoracic cavity element | 2.71e-07 | 34 |
thoracic cavity | 2.71e-07 | 34 |
thoracic segment organ | 4.21e-07 | 35 |