FFCP PHASE1:Hg19::chr16:30709864..30709965,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:30709864..30709965,+
|short_description=p2@SRCAP
|description=CAGE_peak_2_at_SRCAP_5end
|association_with_transcript=-496bp_to_ENST00000262518,ENST0000034...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10847 | |EntrezGene=10847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16974 | |HGNC=16974 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZRS2 | |UniProt=Q6ZRS2 | ||
|association_with_transcript=-496bp_to_ENST00000262518,ENST00000344771,ENST00000395059,NM_006662,uc002dze.1_5end | |||
|cluster_id=chr16:30709864..30709965,+ | |||
|description=CAGE_peak_2_at_SRCAP_5end | |||
|id=chr16:30709864..30709965,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.57e-10!172;CL:0000566!1.57e-10!172;CL:0000988!2.14e-10!182;CL:0002032!7.64e-10!165;CL:0000837!7.64e-10!165;CL:0000738!1.05e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.42e-10,168;CL:0000988,5.66e-10,177;CL:0002032,2.11e-09,161;CL:0000837,2.11e-09,161;CL:0000738,2.70e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.62e-07!235;DOID:2531!5.37e-07!51;DOID:0060083!5.37e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.61e-07,235;DOID:2531,5.31e-07,51;DOID:0060083,5.31e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SRCAP | |||
}} | }} |
Latest revision as of 09:08, 16 September 2015
Short description: | p2@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRCAP_5end |
Coexpression cluster: | NA |
Association with transcript: | -496bp_to_ENST00000262518, ENST00000344771, ENST00000395059, NM_006662, uc002dze.1_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | Q6ZRS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.42e-10 | 168 |
hematopoietic cell | 5.66e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-09 | 161 |
leukocyte | 2.70e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.61e-07 | 235 |
hematologic cancer | 5.31e-07 | 51 |
immune system cancer | 5.31e-07 | 51 |