FFCP PHASE1:Hg19::chr5:175815565..175815615,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51491 | |EntrezGene=51491 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26934 | |HGNC=26934 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERV7,D6RC60,D6RG37,D6RIC3 | |UniProt=E7ERV7,D6RC60,D6RG37,D6RIC3 | ||
|association_with_transcript=0bp_to_ENST00000451293,ENST00000502577,ENST00000502663,ENST00000503849,ENST00000504821,ENST00000507413,ENST00000509257,ENST00000510608_5end | |association_with_transcript=0bp_to_ENST00000451293,ENST00000502577,ENST00000502663,ENST00000503849,ENST00000504821,ENST00000507413,ENST00000509257,ENST00000510608_5end | ||
|cluster_id=chr5:175815565..175815615,- | |||
|coexpression_cluster_id=C3300 | |||
|description=CAGE_peak_1_at_NOP16_5end | |description=CAGE_peak_1_at_NOP16_5end | ||
|id=chr5:175815565..175815615,- | |id=chr5:175815565..175815615,- | ||
|ontology_enrichment_celltype=CL:0000548!6.47e-32!679;CL:0000004!6.47e-32!679;CL:0000255!6.47e-32!679;CL:0000012!1.30e-31!682;CL:0000066!1.63e-26!254;CL:0000003!4.53e-20!722;CL:0002321!1.59e-19!248;CL:0000220!4.60e-19!246;CL:0000063!6.87e-17!578;CL:0000144!7.36e-16!625;CL:0000076!2.87e-12!62;CL:0002371!2.31e-10!591;CL:0000222!2.87e-08!119;CL:0000223!8.14e-08!59;CL:0002076!6.87e-07!43;CL:0000055!6.94e-07!180 | |ontology_enrichment_celltype=CL:0000548!6.47e-32!679;CL:0000004!6.47e-32!679;CL:0000255!6.47e-32!679;CL:0000012!1.30e-31!682;CL:0000066!1.63e-26!254;CL:0000003!4.53e-20!722;CL:0002321!1.59e-19!248;CL:0000220!4.60e-19!246;CL:0000063!6.87e-17!578;CL:0000144!7.36e-16!625;CL:0000076!2.87e-12!62;CL:0002371!2.31e-10!591;CL:0000222!2.87e-08!119;CL:0000223!8.14e-08!59;CL:0002076!6.87e-07!43;CL:0000055!6.94e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-26,253;CL:0002321,6.87e-20,250;CL:0000076,3.62e-12,63;CL:0000222,1.53e-08,121;CL:0000223,7.15e-08,58;CL:0002076,5.81e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.02e-33!239;DOID:162!3.60e-32!235;DOID:2531!1.03e-17!51;DOID:0060083!1.03e-17!51;DOID:0050686!2.15e-17!137;DOID:0050687!3.71e-14!143;DOID:1240!5.14e-14!39;DOID:305!1.63e-13!106;DOID:8692!1.58e-12!31 | |ontology_enrichment_disease=DOID:14566!9.02e-33!239;DOID:162!3.60e-32!235;DOID:2531!1.03e-17!51;DOID:0060083!1.03e-17!51;DOID:0050686!2.15e-17!137;DOID:0050687!3.71e-14!143;DOID:1240!5.14e-14!39;DOID:305!1.63e-13!106;DOID:8692!1.58e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.48e-12;31!DOID:1240;2.29e-11;39!DOID:2531;6.31e-11;51!DOID:0060083;6.31e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.02e-33,239;DOID:162,3.60e-32,235;DOID:2531,1.03e-17,51;DOID:0060083,1.03e-17,51;DOID:0050686,2.15e-17,137;DOID:0050687,3.71e-14,143;DOID:1240,5.14e-14,39;DOID:305,1.63e-13,106;DOID:8692,1.58e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.15e-09!238;UBERON:0009142!1.15e-09!238;UBERON:0002100!4.40e-08!216;UBERON:0001737!9.35e-07!9 | |ontology_enrichment_uberon=UBERON:0003104!1.15e-09!238;UBERON:0009142!1.15e-09!238;UBERON:0002100!4.40e-08!216;UBERON:0001737!9.35e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000072;7.47e-08;37!UBERON:0001737;9.42e-07;9!UBERON:0001557;9.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.07e-09,199;UBERON:0000490,3.05e-08,148;UBERON:0001737,9.35e-07,9 | |||
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| ||
|short_description=p1@NOP16 | |short_description=p1@NOP16 | ||
}} | }} |
Latest revision as of 04:09, 17 September 2015
Short description: | p1@NOP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOP16_5end |
Coexpression cluster: | C3300_acute_lymphoma_chronic_giant_Fibroblast_hereditary_diffuse |
Association with transcript: | 0bp_to_ENST00000451293, ENST00000502577, ENST00000502663, ENST00000503849, ENST00000504821, ENST00000507413, ENST00000509257, ENST00000510608_5end |
EntrezGene: | NOP16 |
HGNC: | 26934 |
UniProt: | E7ERV7D6RC60D6RG37D6RIC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-26 | 253 |
embryonic cell | 6.87e-20 | 250 |
squamous epithelial cell | 3.62e-12 | 63 |
mesodermal cell | 1.53e-08 | 121 |
endodermal cell | 7.15e-08 | 58 |
endo-epithelial cell | 5.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.07e-09 | 199 |
unilaminar epithelium | 3.05e-08 | 148 |
larynx | 9.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.02e-33 | 239 |
cancer | 3.60e-32 | 235 |
hematologic cancer | 1.03e-17 | 51 |
immune system cancer | 1.03e-17 | 51 |
organ system cancer | 2.15e-17 | 137 |
cell type cancer | 3.71e-14 | 143 |
leukemia | 5.14e-14 | 39 |
carcinoma | 1.63e-13 | 106 |
myeloid leukemia | 1.58e-12 | 31 |