FFCP PHASE1:Hg19::chrX:38429941..38429957,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7102 | |EntrezGene=7102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11854 | |HGNC=11854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000488893_5end | |association_with_transcript=5bp_to_ENST00000488893_5end | ||
|cluster_id=chrX:38429941..38429957,+ | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_6_at_TSPAN7_5end | |description=CAGE_peak_6_at_TSPAN7_5end | ||
|id=chrX:38429941..38429957,+ | |id=chrX:38429941..38429957,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.07e-23;1!CL:0000159;1.48e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.07e-23,1;CL:0000159,1.48e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.24e-12;2!UBERON:0001041;3.34e-12;30!UBERON:0009497;1.00e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.07e-23;1!DOID:4556;1.00e-08;3!DOID:1324;6.89e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.07e-23,1;DOID:4556,9.66e-09,3;DOID:305,1.65e-07,106;DOID:1324,6.79e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.76e-21!32;UBERON:0001893!1.16e-19!34;UBERON:0002791!1.49e-17!33;UBERON:0001950!2.32e-17!20;UBERON:0002020!5.72e-17!34;UBERON:0003528!5.72e-17!34;UBERON:0000200!2.24e-16!6;UBERON:0002780!7.49e-16!41;UBERON:0001890!7.49e-16!41;UBERON:0006240!7.49e-16!41;UBERON:0002619!1.11e-15!22;UBERON:0003080!2.07e-15!42;UBERON:0000956!1.20e-13!25;UBERON:0000203!1.20e-13!25;UBERON:0001049!1.28e-10!57;UBERON:0005068!1.28e-10!57;UBERON:0006241!1.28e-10!57;UBERON:0007135!1.28e-10!57;UBERON:0000369!2.00e-10!4;UBERON:0002435!2.00e-10!4;UBERON:0000204!2.00e-10!4;UBERON:0010082!2.00e-10!4;UBERON:0002616!3.65e-10!59;UBERON:0003056!9.72e-10!61;UBERON:0001870!1.60e-09!2;UBERON:0000955!1.66e-09!69;UBERON:0006238!1.66e-09!69;UBERON:0001017!9.77e-09!82;UBERON:0000033!2.68e-08!123;UBERON:0005743!3.50e-08!86;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0007023!3.45e-07!115;UBERON:0000073!4.16e-07!94;UBERON:0001016!4.16e-07!94;UBERON:0005383!8.26e-07!3;UBERON:0005382!8.26e-07!3 | |ontology_enrichment_uberon=UBERON:0001869!4.76e-21!32;UBERON:0001893!1.16e-19!34;UBERON:0002791!1.49e-17!33;UBERON:0001950!2.32e-17!20;UBERON:0002020!5.72e-17!34;UBERON:0003528!5.72e-17!34;UBERON:0000200!2.24e-16!6;UBERON:0002780!7.49e-16!41;UBERON:0001890!7.49e-16!41;UBERON:0006240!7.49e-16!41;UBERON:0002619!1.11e-15!22;UBERON:0003080!2.07e-15!42;UBERON:0000956!1.20e-13!25;UBERON:0000203!1.20e-13!25;UBERON:0001049!1.28e-10!57;UBERON:0005068!1.28e-10!57;UBERON:0006241!1.28e-10!57;UBERON:0007135!1.28e-10!57;UBERON:0000369!2.00e-10!4;UBERON:0002435!2.00e-10!4;UBERON:0000204!2.00e-10!4;UBERON:0010082!2.00e-10!4;UBERON:0002616!3.65e-10!59;UBERON:0003056!9.72e-10!61;UBERON:0001870!1.60e-09!2;UBERON:0000955!1.66e-09!69;UBERON:0006238!1.66e-09!69;UBERON:0001017!9.77e-09!82;UBERON:0000033!2.68e-08!123;UBERON:0005743!3.50e-08!86;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0007023!3.45e-07!115;UBERON:0000073!4.16e-07!94;UBERON:0001016!4.16e-07!94;UBERON:0005383!8.26e-07!3;UBERON:0005382!8.26e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;5.21e-30;3!UBERON:0005382;5.21e-30;3!UBERON:0001874;2.93e-23;1!UBERON:0000369;8.48e-23;4!UBERON:0002435;8.48e-23;4!UBERON:0000204;8.48e-23;4!UBERON:0009663;1.74e-13;7!UBERON:0001873;3.24e-12;2!UBERON:0002420;1.04e-10;9!UBERON:0000125;1.04e-10;9!UBERON:0007245;1.04e-10;9!UBERON:0002308;1.04e-10;9!UBERON:0010009;1.04e-10;9!UBERON:0010011;1.04e-10;9!UBERON:0000454;1.04e-10;9!UBERON:0002394;7.48e-07;4!UBERON:0003928;7.48e-07;4!UBERON:0003343;8.37e-07;4!UBERON:0004785;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.50e-30,3;UBERON:0005382,6.50e-30,3;UBERON:0001874,3.28e-23,1;UBERON:0000369,1.00e-22,4;UBERON:0002435,1.00e-22,4;UBERON:0000204,1.00e-22,4;UBERON:0010082,1.00e-22,4;UBERON:0009663,1.91e-13,7;UBERON:0001873,3.62e-12,2;UBERON:0010122,3.62e-12,2;UBERON:0002420,1.12e-10,9;UBERON:0000125,1.12e-10,9;UBERON:0007245,1.12e-10,9;UBERON:0002308,1.12e-10,9;UBERON:0010009,1.12e-10,9;UBERON:0010011,1.12e-10,9;UBERON:0000454,1.12e-10,9;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,1.08536794762867,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27955725969173,0,0,0,0,0,0,0,0,0.242998226632099,0.670869375198532,0,0,0,3.94432146532259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44825778499256,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,207.678107896893,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0.490738592505128,2.59533391365029,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0.236387681767936,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.71421575442263,0,0,1.46067277649303,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,1.08536794762867,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27955725969173,0,0,0,0,0,0,0,0,0.242998226632099,0.670869375198532,0,0,0,3.94432146532259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44825778499256,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,207.678107896893,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0.490738592505128,2.59533391365029,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0.236387681767936,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.71421575442263,0,0,1.46067277649303,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@TSPAN7 | |short_description=p6@TSPAN7 | ||
}} | }} |
Latest revision as of 00:05, 25 September 2015
Short description: | p6@TSPAN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TSPAN7_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 5bp_to_ENST00000488893_5end |
EntrezGene: | TSPAN7 |
HGNC: | 11854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.07e-23 | 1 |
seromucus secreting cell | 1.48e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 6.50e-30 | 3 |
dorsal striatum | 6.50e-30 | 3 |
putamen | 3.28e-23 | 1 |
corpus striatum | 1.00e-22 | 4 |
striatum | 1.00e-22 | 4 |
ventral part of telencephalon | 1.00e-22 | 4 |
future corpus striatum | 1.00e-22 | 4 |
telencephalic nucleus | 1.91e-13 | 7 |
caudate nucleus | 3.62e-12 | 2 |
future caudate nucleus | 3.62e-12 | 2 |
basal ganglion | 1.12e-10 | 9 |
neural nucleus | 1.12e-10 | 9 |
nuclear complex of neuraxis | 1.12e-10 | 9 |
nucleus of brain | 1.12e-10 | 9 |
aggregate regional part of brain | 1.12e-10 | 9 |
collection of basal ganglia | 1.12e-10 | 9 |
cerebral subcortex | 1.12e-10 | 9 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.07e-23 | 1 |
lung large cell carcinoma | 9.66e-09 | 3 |
carcinoma | 1.65e-07 | 106 |
lung cancer | 6.79e-07 | 15 |