FFCP PHASE1:Hg19::chr5:14308266..14308289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:14308266..14308289,+ | |||
|coexpression_cluster_id=C2808 | |||
|description=CAGE_peak_at_chr5:14308266..14308289,+ | |description=CAGE_peak_at_chr5:14308266..14308289,+ | ||
|id=chr5:14308266..14308289,+ | |id=chr5:14308266..14308289,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.54e-09!42;CL:0000860!7.19e-09!45 | |ontology_enrichment_celltype=CL:0002057!1.54e-09!42;CL:0000860!7.19e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-13;33!CL:0002057;1.51e-13;33!CL:0000473;2.73e-10;39!CL:0000234;2.73e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-08,42;CL:0002057,1.94e-08,42;CL:0000473,3.30e-08,48;CL:0000234,3.30e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;8.58e-07;42 | |||
|ontology_enrichment_disease=DOID:162!4.66e-16!235;DOID:14566!1.22e-15!239;DOID:0050687!9.51e-12!143;DOID:305!2.46e-08!106 | |ontology_enrichment_disease=DOID:162!4.66e-16!235;DOID:14566!1.22e-15!239;DOID:0050687!9.51e-12!143;DOID:305!2.46e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.02e-11,235;DOID:14566,1.63e-10,239;DOID:0050687,8.87e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.61e-11!57;UBERON:0005068!1.61e-11!57;UBERON:0006241!1.61e-11!57;UBERON:0007135!1.61e-11!57;UBERON:0002780!7.11e-11!41;UBERON:0001890!7.11e-11!41;UBERON:0006240!7.11e-11!41;UBERON:0003080!4.22e-10!42;UBERON:0002020!9.22e-10!34;UBERON:0003528!9.22e-10!34;UBERON:0001893!1.45e-09!34;UBERON:0000955!1.48e-09!69;UBERON:0006238!1.48e-09!69;UBERON:0001869!1.53e-09!32;UBERON:0002791!2.38e-09!33;UBERON:0000062!5.96e-09!511;UBERON:0001017!1.19e-08!82;UBERON:0002616!1.48e-08!59;UBERON:0000956!2.18e-08!25;UBERON:0000203!2.18e-08!25;UBERON:0005743!8.13e-08!86;UBERON:0002619!1.01e-07!22;UBERON:0000073!2.00e-07!94;UBERON:0001016!2.00e-07!94;UBERON:0001950!4.46e-07!20;UBERON:0002346!5.82e-07!90 | |ontology_enrichment_uberon=UBERON:0001049!1.61e-11!57;UBERON:0005068!1.61e-11!57;UBERON:0006241!1.61e-11!57;UBERON:0007135!1.61e-11!57;UBERON:0002780!7.11e-11!41;UBERON:0001890!7.11e-11!41;UBERON:0006240!7.11e-11!41;UBERON:0003080!4.22e-10!42;UBERON:0002020!9.22e-10!34;UBERON:0003528!9.22e-10!34;UBERON:0001893!1.45e-09!34;UBERON:0000955!1.48e-09!69;UBERON:0006238!1.48e-09!69;UBERON:0001869!1.53e-09!32;UBERON:0002791!2.38e-09!33;UBERON:0000062!5.96e-09!511;UBERON:0001017!1.19e-08!82;UBERON:0002616!1.48e-08!59;UBERON:0000956!2.18e-08!25;UBERON:0000203!2.18e-08!25;UBERON:0005743!8.13e-08!86;UBERON:0002619!1.01e-07!22;UBERON:0000073!2.00e-07!94;UBERON:0001016!2.00e-07!94;UBERON:0001950!4.46e-07!20;UBERON:0002346!5.82e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.07e-09;34!UBERON:0002020;2.07e-09;34!UBERON:0001869;3.58e-09;32!UBERON:0002791;5.94e-09;32!UBERON:0001893;8.06e-09;34!UBERON:0000956;1.98e-08;25!UBERON:0000203;1.98e-08;25!UBERON:0002780;5.50e-08;41!UBERON:0001890;5.50e-08;41!UBERON:0002619;1.37e-07;22!UBERON:0000073;2.27e-07;53!UBERON:0002616;2.27e-07;53!UBERON:0001950;9.44e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.13e-13,56;UBERON:0005068,7.13e-13,56;UBERON:0006241,7.13e-13,56;UBERON:0007135,7.13e-13,56;UBERON:0000073,7.08e-12,53;UBERON:0002616,7.08e-12,53;UBERON:0000955,1.84e-11,68;UBERON:0006238,1.84e-11,68;UBERON:0002780,6.87e-11,41;UBERON:0001890,6.87e-11,41;UBERON:0003080,6.87e-11,41;UBERON:0006240,6.87e-11,41;UBERON:0003528,4.37e-10,34;UBERON:0002020,4.37e-10,34;UBERON:0001893,7.22e-10,34;UBERON:0001869,8.26e-10,32;UBERON:0001017,1.22e-09,81;UBERON:0002791,1.55e-09,32;UBERON:0001016,2.00e-08,89;UBERON:0000956,2.09e-08,25;UBERON:0000203,2.09e-08,25;UBERON:0003075,7.79e-08,82;UBERON:0007284,7.79e-08,82;UBERON:0002346,1.07e-07,86;UBERON:0002619,1.31e-07,22;UBERON:0001950,7.27e-07,20 | |||
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| ||
|short_description=p@chr5:14308266..14308289,+ | |short_description=p@chr5:14308266..14308289,+ | ||
}} | }} |
Latest revision as of 10:59, 30 July 2015
Short description: | p@chr5:14308266..14308289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:14308266..14308289, + |
Coexpression cluster: | C2808_liposarcoma_CD14_mesenchymal_Fibroblast_parietal_giant_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.94e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.94e-08 | 42 |
defensive cell | 3.30e-08 | 48 |
phagocyte | 3.30e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.13e-13 | 56 |
neural rod | 7.13e-13 | 56 |
future spinal cord | 7.13e-13 | 56 |
neural keel | 7.13e-13 | 56 |
regional part of nervous system | 7.08e-12 | 53 |
regional part of brain | 7.08e-12 | 53 |
brain | 1.84e-11 | 68 |
future brain | 1.84e-11 | 68 |
regional part of forebrain | 6.87e-11 | 41 |
forebrain | 6.87e-11 | 41 |
anterior neural tube | 6.87e-11 | 41 |
future forebrain | 6.87e-11 | 41 |
brain grey matter | 4.37e-10 | 34 |
gray matter | 4.37e-10 | 34 |
telencephalon | 7.22e-10 | 34 |
cerebral hemisphere | 8.26e-10 | 32 |
central nervous system | 1.22e-09 | 81 |
regional part of telencephalon | 1.55e-09 | 32 |
nervous system | 2.00e-08 | 89 |
cerebral cortex | 2.09e-08 | 25 |
pallium | 2.09e-08 | 25 |
neural plate | 7.79e-08 | 82 |
presumptive neural plate | 7.79e-08 | 82 |
neurectoderm | 1.07e-07 | 86 |
regional part of cerebral cortex | 1.31e-07 | 22 |
neocortex | 7.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.02e-11 | 235 |
disease of cellular proliferation | 1.63e-10 | 239 |
cell type cancer | 8.87e-08 | 143 |