FFCP PHASE1:Hg19::chr16:25160253..25160271,-: Difference between revisions
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|id=chr16:25160253..25160271,-
|short_description=p1@LOC100506655
|description=CAGE_peak_1_at_LOC100506655_5end
|association_with_transcript=81bp_to_NR_039998,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506655 | |EntrezGene=100506655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_NR_039998,uc002dob.1_5end | |||
|cluster_id=chr16:25160253..25160271,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_LOC100506655_5end | |||
|id=chr16:25160253..25160271,- | |||
|ontology_enrichment_celltype=CL:0000039!4.99e-28!7;CL:0000586!4.99e-28!7;CL:0000064!2.93e-11!3;CL:0005012!2.93e-11!3;CL:0000067!2.93e-11!3;CL:0002304!2.93e-11!3;CL:0000075!9.94e-10!27;CL:0002322!5.64e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.36e-24;7!CL:0000586;8.36e-24;7!CL:0000064;3.16e-07;3!CL:0000067;3.16e-07;3!CL:0005012;3.16e-07;3!CL:0002304;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.36e-24,7;CL:0000586,8.36e-24,7;CL:0000064,2.97e-07,3;CL:0000067,2.97e-07,3;CL:0005012,2.97e-07,3;CL:0002304,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.95e-20;1!UBERON:0003918;3.76e-08;10!UBERON:0007687;3.76e-08;10 | |||
|ontology_enrichment_disease=DOID:1799!2.82e-09!1;DOID:10165!2.82e-09!1;DOID:1798!2.82e-09!1;DOID:3095!8.16e-09!22;DOID:2994!8.16e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.25e-19;1!DOID:10165;3.25e-19;1!DOID:1798;3.25e-19;1!DOID:3095;5.14e-08;22!DOID:2994;5.14e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.25e-19,1;DOID:10165,3.25e-19,1;DOID:1798,3.25e-19,1;DOID:3095,5.14e-08,22;DOID:2994,5.14e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001778!2.93e-11!3;UBERON:0001775!2.93e-11!3;UBERON:0002363!7.27e-09!1;UBERON:0007647!7.27e-09!1;UBERON:0010115!7.27e-09!1;UBERON:0006834!7.85e-09!1;UBERON:0007190!1.16e-08!1;UBERON:0000488!1.16e-08!4;UBERON:0007625!7.98e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.46e-07;24!UBERON:0011143;2.46e-07;24!UBERON:0001778;3.16e-07;3!UBERON:0001775;3.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.97e-07,3;UBERON:0001775,2.97e-07,3;UBERON:0002113,8.37e-07,26;UBERON:0003918,8.37e-07,26;UBERON:0011143,8.37e-07,26;UBERON:0005095,8.37e-07,26;UBERON:0007687,8.37e-07,26 | |||
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|short_description=p1@LOC100506655 | |||
}} | }} |
Latest revision as of 19:39, 15 September 2015
Short description: | p1@LOC100506655 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100506655_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 81bp_to_NR_039998, uc002dob.1_5end |
EntrezGene: | LOC100506655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.36e-24 | 7 |
germ cell | 8.36e-24 | 7 |
ciliated cell | 2.97e-07 | 3 |
ciliated epithelial cell | 2.97e-07 | 3 |
multi-ciliated epithelial cell | 2.97e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.97e-07 | 3 |
ciliary body | 2.97e-07 | 3 |
kidney | 8.37e-07 | 26 |
kidney mesenchyme | 8.37e-07 | 26 |
upper urinary tract | 8.37e-07 | 26 |
kidney rudiment | 8.37e-07 | 26 |
kidney field | 8.37e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.25e-19 | 1 |
endocrine pancreas cancer | 3.25e-19 | 1 |
pancreatic endocrine carcinoma | 3.25e-19 | 1 |
germ cell and embryonal cancer | 5.14e-08 | 22 |
germ cell cancer | 5.14e-08 | 22 |