FFCP PHASE1:Hg19::chr5:118728649..118728666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |EntrezGene=25816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17260 | |HGNC=17260 | ||
|TSSclassifier=strong | |||
|UniProt=O95379 | |UniProt=O95379 | ||
|association_with_transcript=-106bp_to_AF098933_5end | |association_with_transcript=-106bp_to_AF098933_5end | ||
|cluster_id=chr5:118728649..118728666,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_TNFAIP8_5end | |description=CAGE_peak_17_at_TNFAIP8_5end | ||
|id=chr5:118728649..118728666,+ | |id=chr5:118728649..118728666,+ | ||
|ontology_enrichment_celltype=CL:0002087!2.65e-37!119;CL:0000738!9.39e-34!140;CL:0002031!2.23e-32!124;CL:0000037!8.66e-30!172;CL:0000566!8.66e-30!172;CL:0000988!2.54e-29!182;CL:0002032!4.40e-29!165;CL:0000837!4.40e-29!165;CL:0000860!5.51e-28!45;CL:0002057!1.99e-27!42;CL:0002009!1.63e-22!65;CL:0002194!3.52e-22!63;CL:0000576!3.52e-22!63;CL:0000040!3.52e-22!63;CL:0000559!3.52e-22!63;CL:0000557!2.14e-19!71;CL:0000839!1.46e-18!70;CL:0000766!3.46e-17!76;CL:0000763!4.73e-16!112;CL:0000049!4.73e-16!112;CL:0000838!4.15e-13!52;CL:0000542!1.12e-12!53;CL:0000051!1.12e-12!53;CL:0000134!7.27e-11!358;CL:0002320!1.71e-10!365;CL:0000084!1.63e-08!25;CL:0000827!1.63e-08!25;CL:0000219!2.74e-08!390;CL:0000791!9.62e-08!18;CL:0000789!9.62e-08!18;CL:0002420!9.62e-08!18;CL:0002419!9.62e-08!18;CL:0000790!9.62e-08!18 | |ontology_enrichment_celltype=CL:0002087!2.65e-37!119;CL:0000738!9.39e-34!140;CL:0002031!2.23e-32!124;CL:0000037!8.66e-30!172;CL:0000566!8.66e-30!172;CL:0000988!2.54e-29!182;CL:0002032!4.40e-29!165;CL:0000837!4.40e-29!165;CL:0000860!5.51e-28!45;CL:0002057!1.99e-27!42;CL:0002009!1.63e-22!65;CL:0002194!3.52e-22!63;CL:0000576!3.52e-22!63;CL:0000040!3.52e-22!63;CL:0000559!3.52e-22!63;CL:0000557!2.14e-19!71;CL:0000839!1.46e-18!70;CL:0000766!3.46e-17!76;CL:0000763!4.73e-16!112;CL:0000049!4.73e-16!112;CL:0000838!4.15e-13!52;CL:0000542!1.12e-12!53;CL:0000051!1.12e-12!53;CL:0000134!7.27e-11!358;CL:0002320!1.71e-10!365;CL:0000084!1.63e-08!25;CL:0000827!1.63e-08!25;CL:0000219!2.74e-08!390;CL:0000791!9.62e-08!18;CL:0000789!9.62e-08!18;CL:0002420!9.62e-08!18;CL:0002419!9.62e-08!18;CL:0000790!9.62e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-85;33!CL:0002057;2.69e-85;33!CL:0000473;6.49e-65;39!CL:0000234;6.49e-65;39!CL:0000576;2.49e-36;48!CL:0000766;1.69e-22;69!CL:0002087;1.73e-12;104!CL:0000763;2.19e-11;100!CL:0000738;1.51e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.05e-70,42;CL:0002057,2.05e-70,42;CL:0000473,1.72e-67,48;CL:0000234,1.72e-67,48;CL:0002194,2.68e-53,59;CL:0000576,2.68e-53,59;CL:0000040,2.68e-53,59;CL:0000559,2.68e-53,59;CL:0002009,1.82e-51,61;CL:0000839,2.31e-47,66;CL:0000557,1.29e-46,67;CL:0000766,3.52e-43,72;CL:0002087,1.85e-31,115;CL:0002031,5.29e-30,120;CL:0000763,9.84e-28,108;CL:0000049,9.84e-28,108;CL:0000738,4.69e-26,136;CL:0002032,1.93e-21,161;CL:0000837,1.93e-21,161;CL:0000037,2.16e-20,168;CL:0000988,3.64e-19,177;CL:0000134,1.33e-07,354;CL:0002320,2.25e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-53;42!CL:0000049;3.91e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.13e-18!102;UBERON:0003061!1.13e-18!102;UBERON:0002371!1.26e-16!80;UBERON:0002193!1.97e-16!112;UBERON:0001474!1.85e-15!86;UBERON:0004765!5.38e-14!101;UBERON:0001434!5.38e-14!101;UBERON:0002405!3.70e-12!115;UBERON:0002384!5.66e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!1.13e-18!102;UBERON:0003061!1.13e-18!102;UBERON:0002371!1.26e-16!80;UBERON:0002193!1.97e-16!112;UBERON:0001474!1.85e-15!86;UBERON:0004765!5.38e-14!101;UBERON:0001434!5.38e-14!101;UBERON:0002405!3.70e-12!115;UBERON:0002384!5.66e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.41e-41,76;UBERON:0001474,1.50e-37,82;UBERON:0004765,6.20e-34,90;UBERON:0002405,9.78e-33,93;UBERON:0002390,6.70e-31,98;UBERON:0003061,6.70e-31,98;UBERON:0001434,3.23e-30,100;UBERON:0002193,9.84e-28,108;UBERON:0002204,1.47e-18,167;UBERON:0003081,3.16e-16,203;UBERON:0000926,4.74e-09,315;UBERON:0004120,4.74e-09,315;UBERON:0006603,4.74e-09,315;UBERON:0002384,4.60e-07,371 | |||
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| ||
|short_description=p17@TNFAIP8 | |short_description=p17@TNFAIP8 | ||
}} | }} |
Latest revision as of 21:55, 19 September 2015
Short description: | p17@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -106bp_to_AF098933_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.05e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.05e-70 | 42 |
defensive cell | 1.72e-67 | 48 |
phagocyte | 1.72e-67 | 48 |
monopoietic cell | 2.68e-53 | 59 |
monocyte | 2.68e-53 | 59 |
monoblast | 2.68e-53 | 59 |
promonocyte | 2.68e-53 | 59 |
macrophage dendritic cell progenitor | 1.82e-51 | 61 |
myeloid lineage restricted progenitor cell | 2.31e-47 | 66 |
granulocyte monocyte progenitor cell | 1.29e-46 | 67 |
myeloid leukocyte | 3.52e-43 | 72 |
nongranular leukocyte | 1.85e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 5.29e-30 | 120 |
myeloid cell | 9.84e-28 | 108 |
common myeloid progenitor | 9.84e-28 | 108 |
leukocyte | 4.69e-26 | 136 |
hematopoietic oligopotent progenitor cell | 1.93e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-21 | 161 |
hematopoietic stem cell | 2.16e-20 | 168 |
hematopoietic cell | 3.64e-19 | 177 |
mesenchymal cell | 1.33e-07 | 354 |
connective tissue cell | 2.25e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.41e-41 | 76 |
bone element | 1.50e-37 | 82 |
skeletal element | 6.20e-34 | 90 |
immune system | 9.78e-33 | 93 |
hematopoietic system | 6.70e-31 | 98 |
blood island | 6.70e-31 | 98 |
skeletal system | 3.23e-30 | 100 |
hemolymphoid system | 9.84e-28 | 108 |
musculoskeletal system | 1.47e-18 | 167 |
lateral plate mesoderm | 3.16e-16 | 203 |
mesoderm | 4.74e-09 | 315 |
mesoderm-derived structure | 4.74e-09 | 315 |
presumptive mesoderm | 4.74e-09 | 315 |
connective tissue | 4.60e-07 | 371 |