FFCP PHASE1:Hg19::chr4:74904398..74904413,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2921 | |EntrezGene=2921 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4604 | |HGNC=4604 | ||
|TSSclassifier=strong | |||
|UniProt=P19876 | |UniProt=P19876 | ||
|association_with_transcript=0bp_to_ENST00000296026,ENST00000502974_5end | |association_with_transcript=0bp_to_ENST00000296026,ENST00000502974_5end | ||
|cluster_id=chr4:74904398..74904413,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_CXCL3_5end | |description=CAGE_peak_1_at_CXCL3_5end | ||
|id=chr4:74904398..74904413,- | |id=chr4:74904398..74904413,- | ||
|ontology_enrichment_celltype=CL:0000680!5.17e-15!57;CL:0000056!5.17e-15!57;CL:0000355!5.17e-15!57;CL:0002371!6.53e-15!591;CL:0000359!3.07e-14!32;CL:0002057!4.09e-14!42;CL:0000860!7.29e-14!45;CL:0000187!1.25e-13!54;CL:0000183!4.31e-13!59;CL:0000393!5.29e-13!60;CL:0000211!5.29e-13!60;CL:0002194!1.06e-12!63;CL:0000576!1.06e-12!63;CL:0000040!1.06e-12!63;CL:0000559!1.06e-12!63;CL:0002009!1.09e-12!65;CL:0000766!1.33e-12!76;CL:0000839!2.80e-12!70;CL:0000557!4.66e-12!71;CL:0000723!8.00e-12!436;CL:0000048!1.31e-11!430;CL:0000034!1.48e-11!444;CL:0000192!1.59e-11!42;CL:0000514!1.59e-11!42;CL:0000144!2.33e-11!625;CL:0000012!2.79e-11!682;CL:0000548!1.72e-10!679;CL:0000004!1.72e-10!679;CL:0000255!1.72e-10!679;CL:0000220!4.04e-09!246;CL:0002321!1.01e-08!248;CL:0000222!1.37e-08!119 | |ontology_enrichment_celltype=CL:0000680!5.17e-15!57;CL:0000056!5.17e-15!57;CL:0000355!5.17e-15!57;CL:0002371!6.53e-15!591;CL:0000359!3.07e-14!32;CL:0002057!4.09e-14!42;CL:0000860!7.29e-14!45;CL:0000187!1.25e-13!54;CL:0000183!4.31e-13!59;CL:0000393!5.29e-13!60;CL:0000211!5.29e-13!60;CL:0002194!1.06e-12!63;CL:0000576!1.06e-12!63;CL:0000040!1.06e-12!63;CL:0000559!1.06e-12!63;CL:0002009!1.09e-12!65;CL:0000766!1.33e-12!76;CL:0000839!2.80e-12!70;CL:0000557!4.66e-12!71;CL:0000723!8.00e-12!436;CL:0000048!1.31e-11!430;CL:0000034!1.48e-11!444;CL:0000192!1.59e-11!42;CL:0000514!1.59e-11!42;CL:0000144!2.33e-11!625;CL:0000012!2.79e-11!682;CL:0000548!1.72e-10!679;CL:0000004!1.72e-10!679;CL:0000255!1.72e-10!679;CL:0000220!4.04e-09!246;CL:0002321!1.01e-08!248;CL:0000222!1.37e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.70e-14;32!CL:0000860;8.36e-14;33!CL:0002057;8.36e-14;33!CL:0000473;1.33e-13;39!CL:0000234;1.33e-13;39!CL:0000192;5.22e-09;43!CL:0000576;6.65e-08;48!CL:0000187;7.73e-08;55!CL:0000766;6.41e-07;69!CL:0002539;6.76e-07;10!CL:0000393;8.33e-07;61!CL:0000211;8.33e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.70e-16,48;CL:0000234,1.70e-16,48;CL:0000680,1.50e-15,58;CL:0000056,1.50e-15,58;CL:0000355,1.50e-15,58;CL:0000359,3.48e-15,32;CL:0000187,4.43e-14,55;CL:0000860,6.38e-14,42;CL:0002057,6.38e-14,42;CL:0000723,1.07e-13,433;CL:0000048,1.98e-13,427;CL:0000393,2.29e-13,61;CL:0000211,2.29e-13,61;CL:0000034,2.74e-13,441;CL:0002194,8.02e-13,59;CL:0000576,8.02e-13,59;CL:0000040,8.02e-13,59;CL:0000559,8.02e-13,59;CL:0000766,1.01e-12,72;CL:0002009,1.55e-12,61;CL:0000839,1.71e-12,66;CL:0000557,3.93e-12,67;CL:0000192,8.47e-12,43;CL:0000514,8.47e-12,43;CL:0002321,4.63e-09,250;CL:0000222,1.45e-08,121;CL:0002539,6.65e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-10;42!CL:0000514;5.22e-09;43!CL:0000355;1.32e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;8.01e-11;33!UBERON:0004571;8.01e-11;33!UBERON:0001637;4.10e-10;42!UBERON:0003509;4.10e-10;42!UBERON:0004572;4.10e-10;42!UBERON:0004237;6.76e-07;10!UBERON:0004695;6.76e-07;10!UBERON:0002111;6.76e-07;10!UBERON:0004178;6.76e-07;10 | |||
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| ||
|short_description=p1@CXCL3 | |short_description=p1@CXCL3 | ||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p1@CXCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCL3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000296026, ENST00000502974_5end |
EntrezGene: | CXCL3 |
HGNC: | 4604 |
UniProt: | P19876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.70e-16 | 48 |
phagocyte | 1.70e-16 | 48 |
muscle precursor cell | 1.50e-15 | 58 |
myoblast | 1.50e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.50e-15 | 58 |
vascular associated smooth muscle cell | 3.48e-15 | 32 |
muscle cell | 4.43e-14 | 55 |
classical monocyte | 6.38e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.38e-14 | 42 |
somatic stem cell | 1.07e-13 | 433 |
multi fate stem cell | 1.98e-13 | 427 |
electrically responsive cell | 2.29e-13 | 61 |
electrically active cell | 2.29e-13 | 61 |
stem cell | 2.74e-13 | 441 |
monopoietic cell | 8.02e-13 | 59 |
monocyte | 8.02e-13 | 59 |
monoblast | 8.02e-13 | 59 |
promonocyte | 8.02e-13 | 59 |
myeloid leukocyte | 1.01e-12 | 72 |
macrophage dendritic cell progenitor | 1.55e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.71e-12 | 66 |
granulocyte monocyte progenitor cell | 3.93e-12 | 67 |
smooth muscle cell | 8.47e-12 | 43 |
smooth muscle myoblast | 8.47e-12 | 43 |
embryonic cell | 4.63e-09 | 250 |
mesodermal cell | 1.45e-08 | 121 |
aortic smooth muscle cell | 6.65e-07 | 10 |