FFCP PHASE1:Hg19::chr9:139922631..139922658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZC7 | |UniProt=Q9BZC7 | ||
|association_with_transcript=0bp_to_ENST00000341511,ENST00000494046_5end | |association_with_transcript=0bp_to_ENST00000341511,ENST00000494046_5end | ||
|cluster_id=chr9:139922631..139922658,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_ABCA2_5end | |description=CAGE_peak_2_at_ABCA2_5end | ||
|id=chr9:139922631..139922658,- | |id=chr9:139922631..139922658,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.53e-28!94;UBERON:0001016!6.53e-28!94;UBERON:0005743!7.26e-27!86;UBERON:0001049!1.66e-25!57;UBERON:0005068!1.66e-25!57;UBERON:0006241!1.66e-25!57;UBERON:0007135!1.66e-25!57;UBERON:0001017!9.22e-25!82;UBERON:0000955!3.44e-24!69;UBERON:0006238!3.44e-24!69;UBERON:0002616!1.66e-21!59;UBERON:0007023!8.29e-21!115;UBERON:0002780!1.33e-20!41;UBERON:0001890!1.33e-20!41;UBERON:0006240!1.33e-20!41;UBERON:0002346!3.06e-20!90;UBERON:0003075!6.14e-20!86;UBERON:0007284!6.14e-20!86;UBERON:0003080!1.90e-19!42;UBERON:0002020!8.58e-18!34;UBERON:0003528!8.58e-18!34;UBERON:0001893!8.94e-18!34;UBERON:0002791!3.69e-17!33;UBERON:0001869!2.17e-16!32;UBERON:0003056!1.03e-15!61;UBERON:0002619!9.60e-15!22;UBERON:0000924!2.02e-14!173;UBERON:0006601!2.02e-14!173;UBERON:0004121!5.42e-14!169;UBERON:0000033!1.41e-13!123;UBERON:0001950!1.65e-13!20;UBERON:0000153!1.86e-13!129;UBERON:0007811!1.86e-13!129;UBERON:0000956!4.46e-12!25;UBERON:0000203!4.46e-12!25;UBERON:0002308!2.20e-07!9;UBERON:0000125!2.20e-07!9;UBERON:0002420!2.93e-07!9;UBERON:0007245!2.93e-07!9;UBERON:0010009!2.93e-07!9;UBERON:0010011!2.93e-07!9;UBERON:0000454!2.93e-07!9;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15 | |ontology_enrichment_uberon=UBERON:0000073!6.53e-28!94;UBERON:0001016!6.53e-28!94;UBERON:0005743!7.26e-27!86;UBERON:0001049!1.66e-25!57;UBERON:0005068!1.66e-25!57;UBERON:0006241!1.66e-25!57;UBERON:0007135!1.66e-25!57;UBERON:0001017!9.22e-25!82;UBERON:0000955!3.44e-24!69;UBERON:0006238!3.44e-24!69;UBERON:0002616!1.66e-21!59;UBERON:0007023!8.29e-21!115;UBERON:0002780!1.33e-20!41;UBERON:0001890!1.33e-20!41;UBERON:0006240!1.33e-20!41;UBERON:0002346!3.06e-20!90;UBERON:0003075!6.14e-20!86;UBERON:0007284!6.14e-20!86;UBERON:0003080!1.90e-19!42;UBERON:0002020!8.58e-18!34;UBERON:0003528!8.58e-18!34;UBERON:0001893!8.94e-18!34;UBERON:0002791!3.69e-17!33;UBERON:0001869!2.17e-16!32;UBERON:0003056!1.03e-15!61;UBERON:0002619!9.60e-15!22;UBERON:0000924!2.02e-14!173;UBERON:0006601!2.02e-14!173;UBERON:0004121!5.42e-14!169;UBERON:0000033!1.41e-13!123;UBERON:0001950!1.65e-13!20;UBERON:0000153!1.86e-13!129;UBERON:0007811!1.86e-13!129;UBERON:0000956!4.46e-12!25;UBERON:0000203!4.46e-12!25;UBERON:0002308!2.20e-07!9;UBERON:0000125!2.20e-07!9;UBERON:0002420!2.93e-07!9;UBERON:0007245!2.93e-07!9;UBERON:0010009!2.93e-07!9;UBERON:0010011!2.93e-07!9;UBERON:0000454!2.93e-07!9;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.70e-25;34!UBERON:0003528;5.38e-25;34!UBERON:0002020;5.38e-25;34!UBERON:0002791;1.56e-24;32!UBERON:0001869;2.00e-24;32!UBERON:0002619;8.03e-24;22!UBERON:0002780;9.86e-24;41!UBERON:0001890;9.86e-24;41!UBERON:0000073;1.31e-22;53!UBERON:0002616;1.31e-22;53!UBERON:0001950;9.91e-22;20!UBERON:0000956;5.40e-20;25!UBERON:0000203;5.40e-20;25!UBERON:0001017;7.79e-16;75!UBERON:0001016;8.74e-16;83!UBERON:0000955;4.14e-15;68!UBERON:0000125;2.22e-11;9!UBERON:0002308;2.22e-11;9!UBERON:0002420;3.57e-11;9!UBERON:0007245;3.57e-11;9!UBERON:0010009;3.57e-11;9!UBERON:0010011;3.57e-11;9!UBERON:0000454;3.57e-11;9!UBERON:0009663;3.91e-09;7!UBERON:0004732;8.17e-09;13!UBERON:0002298;2.27e-08;6!UBERON:0000200;8.92e-08;6!UBERON:0004733;9.58e-08;12!UBERON:0002028;9.58e-08;12!UBERON:0001871;1.13e-07;6!UBERON:0007023;3.15e-07;114!UBERON:0000349;9.15e-07;5 | |||
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| ||
|short_description=p2@ABCA2 | |short_description=p2@ABCA2 | ||
}} | }} |
Latest revision as of 15:15, 16 September 2015
Short description: | p2@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000341511, ENST00000494046_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data