FFCP PHASE1:Hg19::chr9:137533678..137533693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=P20908,Q59EE7 | |UniProt=P20908,Q59EE7 | ||
|association_with_transcript=26bp_to_NM_000093,uc004cfe.2_5end | |association_with_transcript=26bp_to_NM_000093,uc004cfe.2_5end | ||
|cluster_id=chr9:137533678..137533693,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_2_at_COL5A1_5end | |description=CAGE_peak_2_at_COL5A1_5end | ||
|id=chr9:137533678..137533693,+ | |id=chr9:137533678..137533693,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.79e-38!180;CL:0000057!1.53e-21!75;CL:0000183!9.89e-16!59;CL:0000680!2.89e-15!57;CL:0000056!2.89e-15!57;CL:0000355!2.89e-15!57;CL:0000222!5.70e-15!119;CL:0000187!1.17e-14!54;CL:0000192!7.32e-13!42;CL:0000514!7.32e-13!42;CL:0000393!2.41e-12!60;CL:0000211!2.41e-12!60;CL:0000359!3.78e-10!32;CL:0000220!3.47e-08!246;CL:0002321!6.69e-08!248;CL:0000144!2.16e-07!625;CL:0002620!3.47e-07!23;CL:0002494!3.99e-07!16;CL:0002334!4.69e-07!12 | |ontology_enrichment_celltype=CL:0000055!9.79e-38!180;CL:0000057!1.53e-21!75;CL:0000183!9.89e-16!59;CL:0000680!2.89e-15!57;CL:0000056!2.89e-15!57;CL:0000355!2.89e-15!57;CL:0000222!5.70e-15!119;CL:0000187!1.17e-14!54;CL:0000192!7.32e-13!42;CL:0000514!7.32e-13!42;CL:0000393!2.41e-12!60;CL:0000211!2.41e-12!60;CL:0000359!3.78e-10!32;CL:0000220!3.47e-08!246;CL:0002321!6.69e-08!248;CL:0000144!2.16e-07!625;CL:0002620!3.47e-07!23;CL:0002494!3.99e-07!16;CL:0002334!4.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.89e-12;19!CL:0000134;7.31e-12;55!CL:0000048;3.34e-10;58!CL:0000723;4.99e-10;61!CL:0000192;5.15e-10;43!CL:0000359;5.82e-10;32!CL:0000187;6.06e-09;55!CL:0000057;6.64e-09;73!CL:0002320;2.85e-08;188!CL:0000034;1.48e-07;69!CL:0002494;2.01e-07;16!CL:0002334;2.24e-07;12!CL:0000393;3.60e-07;61!CL:0000211;3.60e-07;61!CL:0002620;8.67e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.12e-23,76;CL:0000680,2.09e-16,58;CL:0000056,2.09e-16,58;CL:0000355,2.09e-16,58;CL:0000187,9.14e-16,55;CL:0000222,7.47e-15,121;CL:0000192,7.17e-14,43;CL:0000514,7.17e-14,43;CL:0000393,4.14e-13,61;CL:0000211,4.14e-13,61;CL:0000349,1.92e-12,19;CL:0000359,1.29e-10,32;CL:0000048,4.19e-08,427;CL:0002494,1.98e-07,16;CL:0002334,2.35e-07,12;CL:0000723,2.55e-07,433;CL:0002321,3.47e-07,250;CL:0002620,8.93e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.15e-10;43!CL:0000355;5.86e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.22e-17!84;UBERON:0000914!1.41e-15!83;UBERON:0002329!1.41e-15!83;UBERON:0003077!1.41e-15!83;UBERON:0003059!1.41e-15!83;UBERON:0007282!1.41e-15!83;UBERON:0009618!1.41e-15!83;UBERON:0007285!1.41e-15!83;UBERON:0001134!4.51e-15!61;UBERON:0002036!4.51e-15!61;UBERON:0003082!4.51e-15!61;UBERON:0002385!8.07e-15!63;UBERON:0001015!8.07e-15!63;UBERON:0000383!8.07e-15!63;UBERON:0004290!1.19e-14!70;UBERON:0002049!1.37e-13!79;UBERON:0007798!1.37e-13!79;UBERON:0005256!6.52e-13!143;UBERON:0003914!1.78e-12!118;UBERON:0000486!2.38e-12!82;UBERON:0001981!2.21e-11!60;UBERON:0007500!2.21e-11!60;UBERON:0004537!2.21e-11!60;UBERON:0006965!2.21e-11!60;UBERON:0001637!2.88e-11!42;UBERON:0003509!2.88e-11!42;UBERON:0004572!2.88e-11!42;UBERON:0000490!7.70e-11!138;UBERON:0004535!9.57e-11!110;UBERON:0001009!1.71e-10!113;UBERON:0000055!3.83e-10!69;UBERON:0000468!1.92e-09!659;UBERON:0000478!3.02e-09!24;UBERON:0004573!4.82e-09!33;UBERON:0004571!4.82e-09!33;UBERON:0005631!1.45e-08!14;UBERON:0000158!1.45e-08!14;UBERON:0000475!2.62e-08!365;UBERON:0002100!1.28e-07!216;UBERON:0000948!5.02e-07!24;UBERON:0005498!5.02e-07!24;UBERON:0004140!5.02e-07!24;UBERON:0009881!5.02e-07!24;UBERON:0004141!5.02e-07!24;UBERON:0003084!5.02e-07!24;UBERON:0007005!5.02e-07!24;UBERON:0004139!5.02e-07!24;UBERON:0004291!5.02e-07!24;UBERON:0004923!7.89e-07!57;UBERON:0001013!8.45e-07!14;UBERON:0000481!9.95e-07!347 | |ontology_enrichment_uberon=UBERON:0004872!3.22e-17!84;UBERON:0000914!1.41e-15!83;UBERON:0002329!1.41e-15!83;UBERON:0003077!1.41e-15!83;UBERON:0003059!1.41e-15!83;UBERON:0007282!1.41e-15!83;UBERON:0009618!1.41e-15!83;UBERON:0007285!1.41e-15!83;UBERON:0001134!4.51e-15!61;UBERON:0002036!4.51e-15!61;UBERON:0003082!4.51e-15!61;UBERON:0002385!8.07e-15!63;UBERON:0001015!8.07e-15!63;UBERON:0000383!8.07e-15!63;UBERON:0004290!1.19e-14!70;UBERON:0002049!1.37e-13!79;UBERON:0007798!1.37e-13!79;UBERON:0005256!6.52e-13!143;UBERON:0003914!1.78e-12!118;UBERON:0000486!2.38e-12!82;UBERON:0001981!2.21e-11!60;UBERON:0007500!2.21e-11!60;UBERON:0004537!2.21e-11!60;UBERON:0006965!2.21e-11!60;UBERON:0001637!2.88e-11!42;UBERON:0003509!2.88e-11!42;UBERON:0004572!2.88e-11!42;UBERON:0000490!7.70e-11!138;UBERON:0004535!9.57e-11!110;UBERON:0001009!1.71e-10!113;UBERON:0000055!3.83e-10!69;UBERON:0000468!1.92e-09!659;UBERON:0000478!3.02e-09!24;UBERON:0004573!4.82e-09!33;UBERON:0004571!4.82e-09!33;UBERON:0005631!1.45e-08!14;UBERON:0000158!1.45e-08!14;UBERON:0000475!2.62e-08!365;UBERON:0002100!1.28e-07!216;UBERON:0000948!5.02e-07!24;UBERON:0005498!5.02e-07!24;UBERON:0004140!5.02e-07!24;UBERON:0009881!5.02e-07!24;UBERON:0004141!5.02e-07!24;UBERON:0003084!5.02e-07!24;UBERON:0007005!5.02e-07!24;UBERON:0004139!5.02e-07!24;UBERON:0004291!5.02e-07!24;UBERON:0004923!7.89e-07!57;UBERON:0001013!8.45e-07!14;UBERON:0000481!9.95e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.69e-10;24!UBERON:0002384;8.62e-09;198!UBERON:0004573;1.08e-08;33!UBERON:0004571;1.08e-08;33!UBERON:0001637;1.20e-08;42!UBERON:0003509;1.20e-08;42!UBERON:0004572;1.20e-08;42!UBERON:0005631;3.85e-07;10!UBERON:0000158;3.85e-07;10!UBERON:0001013;4.75e-07;14 | |||
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|phase1_expression=69.4011408813526,73.6505802184982,88.3784113681739,60.0439790118782,76.4303471470662,68.0424048798288,136.781934210888,13.8978372153903,15.4099520637905,7.86348596804828,7.6758128476967,169.292063400884,265.613347076053,6.31208400096238,8.94772914465373,20.842079540005,17.4781413126953,29.9427137058823,16.5897151588772,17.7294323630575,34.8841182027673,43.2567515639761,4.57977579409691,3.96935832711364,20.7145355331425,0,0,0,0,0,6.81190942590734,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.5136479153508,33.5350429851818,79.6583760285194,39.0354284575332,54.645832259312,71.8438734045686,60.4417319758835,348.91720200699,5.19941494402373,14.1906814376041,26.9652792077897,3.47094550068939,0,0,0,0,0,0,0,0,1.78886166630035,12.9035189265919,13.1913390610886,14.1326985481002,28.9454610984835,14.3061381808835,7.31482382878837,0.775250277507987,0,2.34304428935269,1.20848795132744,0,3.1728067481262,5.14728312484216,72.1026333614766,0.714397826272638,1.57170560838319,2.25222960966644,7.66583187329416,4.74632829784064,7.87767498900751,0,0,0,229.601041683237,60.4027540640045,78.651053403052,384.074235182662,67.0323242354895,76.2521536193538,77.9267668826846,220.027453188107,46.0592332391654,38.7966735560702,24.3558235639053,156.806295040149,143.46780519552,8.43557154601668,1.5608003841516,4.56377457235559,1.64393548606981,0.587172493218824,1.13311061057692,0.842704840213491,10.4118627339996,4.54486974053541,18.7019663928135,42.7681028621539,48.2170512093186,36.4064544775211,114.978902690598,2.86171393721913,5.88057043398232,7.20366700258876,52.2383368848197,32.4877063546961,50.0292736158967,28.5849101563253,136.156733487846,79.4433486405071,63.7915022490281,149.745456946117,41.4271167538524,131.654315963316,57.8823423191244,188.523163113494,89.6420447483027,106.527052731016,51.4558933410453,100.382201284482,223.656043285467,44.9354358095276,33.2338760928556,0.193260853163297,3.54569956768085,0,0,0.530119073285941,5.80969714347592,4.66474747569167,2.77552935963191,1.82488679537915,23.4674298494724,45.026865673502,20.7202382028721,12.0735661288315,15.1594691150613,9.93777120334689,12.4752670657795,9.15841913557232,9.70586960045067,11.3297310928051,9.96536600266606,7.9550471814497,7.6526371398885,7.69494313892781,2.21446636387394,98.1692416624121,96.719892662879,226.393415533735,1.26755034821831,0,2.36315962672562,0,0.122988438543114,16.8136454092555,1.53650399572076,0,0,0,16.9420318761369,15.5990217791937,4.3299402607582,2.08674728955138,216.853858253563,0.866198686566443,0.462985512576611,0.951270761172991,2.37061319387782,1.71697232418975,0,0,0,0.93733833986777,21.8376766658517,0.708875486211932,0.53735113621709,0.581267877027924,0,0,0,1.24396869324463,1.29707958075265,0.37872730027914,0.444485260045183,0,0,10.2643467613623,1.85089486865982,0,0,16.483269398768,33.1329652313293,6.38043086642265,129.271715757778,78.6844180874141,43.955743132912,32.9763264565239,27.0419335969552,13.8891982101557,2.83698264046557,12.7882645927728,84.3570162583071,765.639085207326,130.895213548142,22.8015329005615,113.725423597615,55.43663110534,20.4978776400519,33.1182714268112,26.6927886456092,0,0,0,90.3385705203267,56.2823485587158,8.5582143024431,35.4714201335569,15.6162005138291,15.5783038018709,0,0,0,0,1.27047312111232,0,1.54657762555539,1.34013012267479,1.27587750330633,0,0,0,15.5818194483308,9.00306937907419,6.51036056879365,87.7637035660006,84.0400537234632,72.0700036705081,82.9361218148409,64.4024653417319,59.1259510545561,62.083842775503,83.692425415465,91.6314767652265,15.9865850621272,80.4742757171864,100.541023176581,0,0,0,47.2879011456165,204.715590597911,306.018976849636,113.137160365362,293.112368980199,190.84886421449,129.164262449747,65.498527880538,205.0887494581,172.16495707619,22.823034682793,86.4725602274929,19.0535001952037,24.4049581716302,26.1473351534908,0.362578348774867,5.41367469818869,0.0920809889358963,41.7924591319169,22.7613960008396,31.3387351753024,2.70719767744447,0.693138033939733,2.35304930753057,5.84556898613043,2.74434235121477,3.4120015221269,2.04112446331819,13.8186186305369,12.3381802152231,13.5473218771926,16.5557625372102,0.509752546090077,0,1.34324852833307,0,0,0,6.56029291399411,0.976135183992909,2.67906630284078,19.5042960063071,13.5315579869764,6.3169209179579,1.95018073810956,54.6325361470142,7.0569624353249,5.5457502161272,7.82868741103261,5.78913604435028,18.1540213827382,14.6466860853371,6.30677042879147,84.5804338644005,7.27253627588304,8.07198282933446,19.1419068741876,10.7227247706883,23.2422774648643,484.811014119186,18.8200062943362,23.1025185132067,20.7599351823639,20.0084588177267,39.288734450031,20.3237339173628,23.8181356390187,26.575871676373,85.2116966839497,30.7077349573601,45.3615327315956,30.5475118008899,38.4624833697623,23.2035470282476,53.8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| ||
|short_description=p2@COL5A1 | |short_description=p2@COL5A1 | ||
}} | }} |
Latest revision as of 08:58, 16 September 2015
Short description: | p2@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 26bp_to_NM_000093, uc004cfe.2_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | P20908Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.12e-23 | 76 |
muscle precursor cell | 2.09e-16 | 58 |
myoblast | 2.09e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.09e-16 | 58 |
muscle cell | 9.14e-16 | 55 |
mesodermal cell | 7.47e-15 | 121 |
smooth muscle cell | 7.17e-14 | 43 |
smooth muscle myoblast | 7.17e-14 | 43 |
electrically responsive cell | 4.14e-13 | 61 |
electrically active cell | 4.14e-13 | 61 |
extraembryonic cell | 1.92e-12 | 19 |
vascular associated smooth muscle cell | 1.29e-10 | 32 |
multi fate stem cell | 4.19e-08 | 427 |
cardiocyte | 1.98e-07 | 16 |
preadipocyte | 2.35e-07 | 12 |
somatic stem cell | 2.55e-07 | 433 |
embryonic cell | 3.47e-07 | 250 |
skin fibroblast | 8.93e-07 | 23 |