FFCP PHASE1:Hg19::chr9:137533615..137533660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=P20908,Q59EE7 | |UniProt=P20908,Q59EE7 | ||
|association_with_transcript=0bp_to_ENST00000371817,NM_000093,uc004cfe.2_5end | |association_with_transcript=0bp_to_ENST00000371817,NM_000093,uc004cfe.2_5end | ||
|cluster_id=chr9:137533615..137533660,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_1_at_COL5A1_5end | |description=CAGE_peak_1_at_COL5A1_5end | ||
|id=chr9:137533615..137533660,+ | |id=chr9:137533615..137533660,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.56e-35!180;CL:0000057!1.82e-20!75;CL:0000183!1.18e-13!59;CL:0000222!1.23e-13!119;CL:0000680!4.71e-13!57;CL:0000056!4.71e-13!57;CL:0000355!4.71e-13!57;CL:0000187!1.28e-12!54;CL:0000393!5.96e-11!60;CL:0000211!5.96e-11!60;CL:0000192!2.43e-10!42;CL:0000514!2.43e-10!42;CL:0000359!8.81e-08!32;CL:0000220!1.88e-07!246;CL:0002321!2.32e-07!248;CL:0002334!5.35e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.56e-35!180;CL:0000057!1.82e-20!75;CL:0000183!1.18e-13!59;CL:0000222!1.23e-13!119;CL:0000680!4.71e-13!57;CL:0000056!4.71e-13!57;CL:0000355!4.71e-13!57;CL:0000187!1.28e-12!54;CL:0000393!5.96e-11!60;CL:0000211!5.96e-11!60;CL:0000192!2.43e-10!42;CL:0000514!2.43e-10!42;CL:0000359!8.81e-08!32;CL:0000220!1.88e-07!246;CL:0002321!2.32e-07!248;CL:0002334!5.35e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.54e-12;19!CL:0000134;8.58e-10;55!CL:0000723;7.64e-09;61!CL:0000048;1.08e-08;58!CL:0000057;1.65e-08;73!CL:0000192;6.71e-08;43!CL:0000187;1.06e-07;55!CL:0002320;1.16e-07;188!CL:0000359;1.91e-07;32!CL:0002334;3.91e-07;12!CL:0000034;5.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-21,76;CL:0000222,3.65e-14,121;CL:0000680,1.27e-13,58;CL:0000056,1.27e-13,58;CL:0000355,1.27e-13,58;CL:0000187,3.54e-13,55;CL:0000349,9.45e-12,19;CL:0000393,1.86e-11,61;CL:0000211,1.86e-11,61;CL:0000192,7.72e-11,43;CL:0000514,7.72e-11,43;CL:0000359,6.18e-08,32;CL:0002321,1.64e-07,250;CL:0002334,3.92e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;6.71e-08;43!CL:0000355;9.39e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.18e-14!84;UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0001134!1.96e-13!61;UBERON:0002036!1.96e-13!61;UBERON:0003082!1.96e-13!61;UBERON:0002385!2.31e-13!63;UBERON:0001015!2.31e-13!63;UBERON:0000383!2.31e-13!63;UBERON:0004290!6.90e-13!70;UBERON:0002049!3.64e-12!79;UBERON:0007798!3.64e-12!79;UBERON:0005256!6.00e-11!143;UBERON:0000486!1.05e-10!82;UBERON:0000468!4.01e-10!659;UBERON:0003914!8.95e-10!118;UBERON:0000490!1.51e-09!138;UBERON:0001981!1.64e-09!60;UBERON:0007500!1.64e-09!60;UBERON:0004537!1.64e-09!60;UBERON:0006965!1.64e-09!60;UBERON:0000475!3.63e-09!365;UBERON:0004535!6.58e-09!110;UBERON:0000478!7.72e-09!24;UBERON:0001637!8.43e-09!42;UBERON:0003509!8.43e-09!42;UBERON:0004572!8.43e-09!42;UBERON:0001009!8.85e-09!113;UBERON:0000055!1.11e-08!69;UBERON:0005631!1.94e-08!14;UBERON:0000158!1.94e-08!14;UBERON:0002100!7.05e-08!216;UBERON:0000481!3.36e-07!347;UBERON:0004573!6.30e-07!33;UBERON:0004571!6.30e-07!33;UBERON:0004923!8.15e-07!57 | |ontology_enrichment_uberon=UBERON:0004872!1.18e-14!84;UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0001134!1.96e-13!61;UBERON:0002036!1.96e-13!61;UBERON:0003082!1.96e-13!61;UBERON:0002385!2.31e-13!63;UBERON:0001015!2.31e-13!63;UBERON:0000383!2.31e-13!63;UBERON:0004290!6.90e-13!70;UBERON:0002049!3.64e-12!79;UBERON:0007798!3.64e-12!79;UBERON:0005256!6.00e-11!143;UBERON:0000486!1.05e-10!82;UBERON:0000468!4.01e-10!659;UBERON:0003914!8.95e-10!118;UBERON:0000490!1.51e-09!138;UBERON:0001981!1.64e-09!60;UBERON:0007500!1.64e-09!60;UBERON:0004537!1.64e-09!60;UBERON:0006965!1.64e-09!60;UBERON:0000475!3.63e-09!365;UBERON:0004535!6.58e-09!110;UBERON:0000478!7.72e-09!24;UBERON:0001637!8.43e-09!42;UBERON:0003509!8.43e-09!42;UBERON:0004572!8.43e-09!42;UBERON:0001009!8.85e-09!113;UBERON:0000055!1.11e-08!69;UBERON:0005631!1.94e-08!14;UBERON:0000158!1.94e-08!14;UBERON:0002100!7.05e-08!216;UBERON:0000481!3.36e-07!347;UBERON:0004573!6.30e-07!33;UBERON:0004571!6.30e-07!33;UBERON:0004923!8.15e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.96e-09;24!UBERON:0002384;2.70e-08;198!UBERON:0005631;9.26e-07;10!UBERON:0000158;9.26e-07;10!UBERON:0001637;9.65e-07;42!UBERON:0003509;9.65e-07;42!UBERON:0004572;9.65e-07;42 | |||
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|phase1_expression=237.816998465159,184.768752117918,310.522552223424,104.076230287256,130.959600667195,135.212471235557,255.832876949994,42.9569513930245,44.1403711657727,35.3856868562173,13.9560233594486,333.341533870643,494.299317200122,40.5953637708953,34.7967244514312,36.9778830548476,48.2155622419181,46.0095356944045,50.2570782754222,68.8246714649244,133.416452073741,165.50409294043,24.0438229190088,17.9305496845478,68.1696532999779,0,0,0,0,0,15.7912445782398,0,0,1.47901604066715,0,0,3.22960483268332,1.66198622559563,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3187890579341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,3.95076127162616,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0.589211814949674,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,0,0.144824403882799,251.121072303381,78.4720005853254,260.711763598958,97.5885711438329,149.900035280131,254.92987337105,147.923186151504,967.916757031943,34.788812716377,67.8491956235446,111.55017783027,21.3495893061272,0,0,0,0,0.132957960518865,0,0,0,17.0935670335366,30.1082108287144,49.641091729886,46.9205591796928,98.5823675093279,44.2940047523509,26.1243708171013,4.65150166504792,1.06729878806013,11.7152214467635,2.41697590265488,0,16.8402819708237,10.6622293300302,148.255976462362,11.9661635900667,16.6151735743366,10.6980906459156,27.596994743859,23.7316414892032,39.0219714571767,0,3.87780264148325,0,493.493148033451,197.163706661751,179.414440001911,525.197852591078,147.187378612318,163.717859241554,154.786043808072,518.49518677287,132.8871121157,76.3809510635131,48.0577995153569,280.162598570768,368.752591667199,34.6795719114019,3.74592092196385,8.55707732316674,9.71416423586707,4.22764195117554,4.85618833104395,5.47758146138769,43.6889926485472,21.1275025776241,72.9480015100904,159.192382875795,138.964014254549,91.0161361938027,255.828058486581,25.0820809791559,30.5289188487593,26.0440268555132,120.71884574223,117.078337995226,147.533773846278,109.34862456626,307.294445935021,272.499228132492,221.256904810583,335.501845422362,90.3770681421109,285.465718370557,198.028335136812,643.037825839224,170.125011011453,265.560330504808,237.948987990344,213.53444105765,564.1102425089,88.4603422438682,96.8190982092884,0.386521706326594,4.90943017063502,0,4.26907971453584,4.90360142789496,17.6614793161668,13.6832592620289,9.58819233327388,3.6497735907583,61.0153176086282,131.221151391349,73.2115083168147,48.2942645153258,49.8096842352014,36.6751080123516,36.2457083667919,29.1623346159013,44.22788306569,33.1176755020457,33.6924279137757,29.528056487076,22.7616899545401,20.0068521612123,20.6683527294901,258.04486379834,302.506898328579,715.932424447589,1.26755034821831,0,8.27105869353966,0,1.35287282397425,57.132080829409,4.49976170175365,0,0.603173834469785,0.740707561268237,49.5228624071694,37.4376522700648,46.1860294480874,14.7231614318348,467.051785670099,6.0633908059651,6.01881166349594,7.80042024161853,8.69224837755203,9.4433477830436,0,0,0,1.87467667973554,46.0271031264875,1.41775097242386,3.76145795351963,1.16253575405585,2.68367875415648,0,0.088048434013226,9.95174954595706,8.79131715843465,5.6809095041871,2.28592419451809,0,0,49.6110093465845,7.71206195274926,0,0,43.506860726,103.322536313487,48.0365772127223,419.357445918231,375.539268144477,106.508146822056,120.735904929531,84.2460238982065,38.066691390797,34.0437916855868,29.572861870787,415.922983551551,1864.447836125,299.6594825882,87.9487697593084,439.619840594529,178.189171410022,57.8763603954405,66.2365428536224,82.2777717428329,0,0,0,170.852521965498,168.847045676147,55.6283929658802,74.2728103204681,35.9583564463171,57.6576301632464,0,0.394061520403854,0.431255149719035,0.128343036279748,6.35236560556159,3.90419561572865,3.09315525111078,6.03058555203656,4.46557126157214,0,0,0,100.729714701414,57.0194394008032,15.7333713745847,315.907738665296,274.423784770035,281.814215665641,307.144790110894,206.449024413215,106.881526906313,130.376069828556,218.530221918159,274.341322790054,68.0298701285089,206.961823438117,216.866643848461,0.206768026122887,0,0,159.748230152179,401.109409220298,854.252578656347,380.845485001822,979.394313524415,464.211796192304,442.464482379935,201.612656132281,585.990834726162,209.269473687437,84.1984928162499,276.996291488478,79.6633413333949,71.6571112273397,76.6988497835731,2.53804844142407,10.0253235151642,1.10497186723076,144.321761342911,60.2721766102233,85.8864917984228,3.60959690325929,5.08301224889137,12.5495963068297,16.0753147118587,18.2604317984675,11.3733384070897,5.10281115829547,35.4102102407509,92.5363516141736,56.8987518842091,79.7686740429217,0,1.66215201785745,5.82074362277664,0,0,0.512900250232778,21.9769812618803,9.11059505060049,17.7230540034082,141.566392609159,113.450562390808,29.861807975801,9.1008434445113,199.248073006758,53.1688950606671,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| ||
|short_description=p1@COL5A1 | |short_description=p1@COL5A1 | ||
}} | }} |
Latest revision as of 08:57, 16 September 2015
Short description: | p1@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 0bp_to_ENST00000371817, NM_000093, uc004cfe.2_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | P20908Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-21 | 76 |
mesodermal cell | 3.65e-14 | 121 |
muscle precursor cell | 1.27e-13 | 58 |
myoblast | 1.27e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.27e-13 | 58 |
muscle cell | 3.54e-13 | 55 |
extraembryonic cell | 9.45e-12 | 19 |
electrically responsive cell | 1.86e-11 | 61 |
electrically active cell | 1.86e-11 | 61 |
smooth muscle cell | 7.72e-11 | 43 |
smooth muscle myoblast | 7.72e-11 | 43 |
vascular associated smooth muscle cell | 6.18e-08 | 32 |
embryonic cell | 1.64e-07 | 250 |
preadipocyte | 3.92e-07 | 12 |