FFCP PHASE1:Hg19::chr9:129986916..129986937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84253 | |EntrezGene=84253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |HGNC=25425 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2Q8 | |UniProt=F2Z2Q8 | ||
|association_with_transcript=11bp_to_ENST00000453030_5end | |association_with_transcript=11bp_to_ENST00000453030_5end | ||
|cluster_id=chr9:129986916..129986937,+ | |||
|description=CAGE_peak_6_at_GARNL3_5end | |description=CAGE_peak_6_at_GARNL3_5end | ||
|id=chr9:129986916..129986937,+ | |id=chr9:129986916..129986937,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.99e-10;82!UBERON:0002532;5.14e-07;206!UBERON:0010316;5.14e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.81e-37!115;UBERON:0001017!8.40e-27!82;UBERON:0005743!1.79e-25!86;UBERON:0000073!6.18e-25!94;UBERON:0001016!6.18e-25!94;UBERON:0001049!1.36e-22!57;UBERON:0005068!1.36e-22!57;UBERON:0006241!1.36e-22!57;UBERON:0007135!1.36e-22!57;UBERON:0002616!6.46e-21!59;UBERON:0000955!1.01e-20!69;UBERON:0006238!1.01e-20!69;UBERON:0003080!7.09e-17!42;UBERON:0002780!1.98e-16!41;UBERON:0001890!1.98e-16!41;UBERON:0006240!1.98e-16!41;UBERON:0001893!1.36e-14!34;UBERON:0002020!2.36e-14!34;UBERON:0003528!2.36e-14!34;UBERON:0003075!6.24e-14!86;UBERON:0007284!6.24e-14!86;UBERON:0002791!6.30e-14!33;UBERON:0002346!6.55e-14!90;UBERON:0001869!3.53e-13!32;UBERON:0000924!1.05e-11!173;UBERON:0006601!1.05e-11!173;UBERON:0000153!1.08e-11!129;UBERON:0007811!1.08e-11!129;UBERON:0004121!1.46e-11!169;UBERON:0002619!3.73e-11!22;UBERON:0000033!1.05e-10!123;UBERON:0001950!6.12e-10!20;UBERON:0000956!1.71e-09!25;UBERON:0000203!1.71e-09!25;UBERON:0003056!3.89e-09!61;UBERON:0003076!6.06e-07!15;UBERON:0003057!6.06e-07!15;UBERON:0002420!9.42e-07!9;UBERON:0007245!9.42e-07!9;UBERON:0010009!9.42e-07!9;UBERON:0010011!9.42e-07!9;UBERON:0000454!9.42e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!9.81e-37!115;UBERON:0001017!8.40e-27!82;UBERON:0005743!1.79e-25!86;UBERON:0000073!6.18e-25!94;UBERON:0001016!6.18e-25!94;UBERON:0001049!1.36e-22!57;UBERON:0005068!1.36e-22!57;UBERON:0006241!1.36e-22!57;UBERON:0007135!1.36e-22!57;UBERON:0002616!6.46e-21!59;UBERON:0000955!1.01e-20!69;UBERON:0006238!1.01e-20!69;UBERON:0003080!7.09e-17!42;UBERON:0002780!1.98e-16!41;UBERON:0001890!1.98e-16!41;UBERON:0006240!1.98e-16!41;UBERON:0001893!1.36e-14!34;UBERON:0002020!2.36e-14!34;UBERON:0003528!2.36e-14!34;UBERON:0003075!6.24e-14!86;UBERON:0007284!6.24e-14!86;UBERON:0002791!6.30e-14!33;UBERON:0002346!6.55e-14!90;UBERON:0001869!3.53e-13!32;UBERON:0000924!1.05e-11!173;UBERON:0006601!1.05e-11!173;UBERON:0000153!1.08e-11!129;UBERON:0007811!1.08e-11!129;UBERON:0004121!1.46e-11!169;UBERON:0002619!3.73e-11!22;UBERON:0000033!1.05e-10!123;UBERON:0001950!6.12e-10!20;UBERON:0000956!1.71e-09!25;UBERON:0000203!1.71e-09!25;UBERON:0003056!3.89e-09!61;UBERON:0003076!6.06e-07!15;UBERON:0003057!6.06e-07!15;UBERON:0002420!9.42e-07!9;UBERON:0007245!9.42e-07!9;UBERON:0010009!9.42e-07!9;UBERON:0010011!9.42e-07!9;UBERON:0000454!9.42e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.25e-20;22!UBERON:0001893;3.18e-19;34!UBERON:0000073;1.02e-18;53!UBERON:0002616;1.02e-18;53!UBERON:0003528;1.27e-18;34!UBERON:0002020;1.27e-18;34!UBERON:0002791;5.01e-18;32!UBERON:0001869;7.62e-18;32!UBERON:0002780;2.99e-17;41!UBERON:0001890;2.99e-17;41!UBERON:0000956;3.39e-17;25!UBERON:0000203;3.39e-17;25!UBERON:0001950;6.80e-17;20!UBERON:0001016;7.04e-11;83!UBERON:0001017;3.85e-10;75!UBERON:0007023;2.52e-09;114!UBERON:0002298;6.73e-09;6!UBERON:0000955;7.22e-09;68!UBERON:0000200;1.45e-08;6!UBERON:0004733;2.14e-08;12!UBERON:0002028;2.14e-08;12!UBERON:0004732;1.17e-07;13!UBERON:0006947;2.15e-07;3!UBERON:0004054;2.15e-07;3!UBERON:0001896;2.77e-07;3!UBERON:0005290;2.77e-07;3!UBERON:0000349;3.30e-07;5!UBERON:0001872;6.94e-07;5!UBERON:0001870;7.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.28e-37,114;UBERON:0001049,1.08e-32,56;UBERON:0005068,1.08e-32,56;UBERON:0006241,1.08e-32,56;UBERON:0007135,1.08e-32,56;UBERON:0000073,5.04e-30,53;UBERON:0002616,5.04e-30,53;UBERON:0001017,3.12e-27,81;UBERON:0001016,4.32e-25,89;UBERON:0000955,2.05e-24,68;UBERON:0006238,2.05e-24,68;UBERON:0003075,3.46e-24,82;UBERON:0007284,3.46e-24,82;UBERON:0002346,4.83e-24,86;UBERON:0001893,1.19e-23,34;UBERON:0002780,4.93e-23,41;UBERON:0001890,4.93e-23,41;UBERON:0003080,4.93e-23,41;UBERON:0006240,4.93e-23,41;UBERON:0003528,4.20e-21,34;UBERON:0002020,4.20e-21,34;UBERON:0002791,1.98e-20,32;UBERON:0001869,2.60e-20,32;UBERON:0011216,9.71e-20,223;UBERON:0002619,1.31e-19,22;UBERON:0010371,1.44e-19,104;UBERON:0000956,7.46e-17,25;UBERON:0000203,7.46e-17,25;UBERON:0001950,1.41e-16,20;UBERON:0003056,2.49e-16,61;UBERON:0010314,1.99e-15,132;UBERON:0004121,5.06e-15,171;UBERON:0000924,5.06e-15,171;UBERON:0006601,5.06e-15,171;UBERON:0004111,1.30e-11,240;UBERON:0000025,1.42e-11,192;UBERON:0003076,9.38e-11,15;UBERON:0003057,9.38e-11,15;UBERON:0000200,1.20e-08,6;UBERON:0002298,1.31e-08,6;UBERON:0002050,1.36e-08,564;UBERON:0000923,3.40e-08,560;UBERON:0010316,3.40e-08,560;UBERON:0005291,3.40e-08,560;UBERON:0006598,3.40e-08,560;UBERON:0010317,3.40e-08,560;UBERON:0002532,3.40e-08,560;UBERON:0004733,3.44e-08,12;UBERON:0002028,3.44e-08,12;UBERON:0007277,3.44e-08,12;UBERON:0005423,9.34e-08,581;UBERON:0000922,1.01e-07,592;UBERON:0006947,1.57e-07,3;UBERON:0004054,1.57e-07,3;UBERON:0004732,1.80e-07,13;UBERON:0001896,5.63e-07,3;UBERON:0005290,5.63e-07,3;UBERON:0010096,5.63e-07,3;UBERON:0000349,5.93e-07,5;UBERON:0001870,6.80e-07,3;UBERON:0000483,7.83e-07,306 | |||
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| ||
|short_description=p6@GARNL3 | |short_description=p6@GARNL3 | ||
}} | }} |
Latest revision as of 03:50, 25 September 2015
Short description: | p6@GARNL3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GARNL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000453030_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | F2Z2Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data