FFCP PHASE1:Hg19::chr4:146296807..146296819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19212 | |HGNC=19212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000536295_5end | |association_with_transcript=112bp_to_ENST00000536295_5end | ||
|cluster_id=chr4:146296807..146296819,+ | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_2_at_RTN3P1_5end | |description=CAGE_peak_2_at_RTN3P1_5end | ||
|id=chr4:146296807..146296819,+ | |id=chr4:146296807..146296819,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,8.20e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.13e-17!57;UBERON:0005068!9.13e-17!57;UBERON:0006241!9.13e-17!57;UBERON:0007135!9.13e-17!57;UBERON:0001017!3.08e-15!82;UBERON:0002020!2.93e-14!34;UBERON:0003528!2.93e-14!34;UBERON:0005743!6.09e-14!86;UBERON:0001893!6.69e-14!34;UBERON:0002616!8.13e-14!59;UBERON:0003080!1.85e-13!42;UBERON:0002791!2.52e-13!33;UBERON:0001869!2.57e-13!32;UBERON:0002780!3.36e-13!41;UBERON:0001890!3.36e-13!41;UBERON:0006240!3.36e-13!41;UBERON:0000956!6.36e-13!25;UBERON:0000203!6.36e-13!25;UBERON:0002619!2.01e-12!22;UBERON:0000955!2.29e-12!69;UBERON:0006238!2.29e-12!69;UBERON:0000073!3.84e-12!94;UBERON:0001016!3.84e-12!94;UBERON:0001950!2.13e-11!20;UBERON:0007023!2.71e-10!115;UBERON:0002346!9.47e-10!90;UBERON:0003075!2.14e-09!86;UBERON:0007284!2.14e-09!86;UBERON:0003056!3.67e-07!61 | |ontology_enrichment_uberon=UBERON:0001049!9.13e-17!57;UBERON:0005068!9.13e-17!57;UBERON:0006241!9.13e-17!57;UBERON:0007135!9.13e-17!57;UBERON:0001017!3.08e-15!82;UBERON:0002020!2.93e-14!34;UBERON:0003528!2.93e-14!34;UBERON:0005743!6.09e-14!86;UBERON:0001893!6.69e-14!34;UBERON:0002616!8.13e-14!59;UBERON:0003080!1.85e-13!42;UBERON:0002791!2.52e-13!33;UBERON:0001869!2.57e-13!32;UBERON:0002780!3.36e-13!41;UBERON:0001890!3.36e-13!41;UBERON:0006240!3.36e-13!41;UBERON:0000956!6.36e-13!25;UBERON:0000203!6.36e-13!25;UBERON:0002619!2.01e-12!22;UBERON:0000955!2.29e-12!69;UBERON:0006238!2.29e-12!69;UBERON:0000073!3.84e-12!94;UBERON:0001016!3.84e-12!94;UBERON:0001950!2.13e-11!20;UBERON:0007023!2.71e-10!115;UBERON:0002346!9.47e-10!90;UBERON:0003075!2.14e-09!86;UBERON:0007284!2.14e-09!86;UBERON:0003056!3.67e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.52e-26;22!UBERON:0001950;1.71e-23;20!UBERON:0003528;7.13e-23;34!UBERON:0002020;7.13e-23;34!UBERON:0001869;2.34e-22;32!UBERON:0000956;2.45e-22;25!UBERON:0000203;2.45e-22;25!UBERON:0002791;2.77e-22;32!UBERON:0001893;1.06e-20;34!UBERON:0002780;8.38e-17;41!UBERON:0001890;8.38e-17;41!UBERON:0000073;7.33e-16;53!UBERON:0002616;7.33e-16;53!UBERON:0000955;2.38e-11;68!UBERON:0001017;5.88e-11;75!UBERON:0001016;3.12e-09;83!UBERON:0001871;3.89e-09;6!UBERON:0001872;1.48e-08;5!UBERON:0000349;1.48e-08;5!UBERON:0004732;1.97e-07;13!UBERON:0000200;2.00e-07;6!UBERON:0002298;2.68e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.34e-30,56;UBERON:0005068,1.34e-30,56;UBERON:0006241,1.34e-30,56;UBERON:0007135,1.34e-30,56;UBERON:0000073,1.47e-28,53;UBERON:0002616,1.47e-28,53;UBERON:0001017,6.68e-28,81;UBERON:0003528,1.17e-27,34;UBERON:0002020,1.17e-27,34;UBERON:0002619,6.86e-27,22;UBERON:0001016,1.96e-25,89;UBERON:0001893,2.25e-25,34;UBERON:0001869,2.83e-25,32;UBERON:0002791,6.38e-25,32;UBERON:0000955,2.67e-24,68;UBERON:0006238,2.67e-24,68;UBERON:0001950,3.29e-24,20;UBERON:0002780,1.34e-23,41;UBERON:0001890,1.34e-23,41;UBERON:0003080,1.34e-23,41;UBERON:0006240,1.34e-23,41;UBERON:0000956,4.76e-23,25;UBERON:0000203,4.76e-23,25;UBERON:0003075,2.50e-21,82;UBERON:0007284,2.50e-21,82;UBERON:0002346,3.35e-21,86;UBERON:0007023,1.26e-16,114;UBERON:0003056,5.98e-16,61;UBERON:0010371,1.43e-15,104;UBERON:0010314,6.23e-15,132;UBERON:0004121,3.01e-12,171;UBERON:0000924,3.01e-12,171;UBERON:0006601,3.01e-12,171;UBERON:0011216,5.30e-10,223;UBERON:0001871,2.69e-09,6;UBERON:0001872,4.51e-09,5;UBERON:0000349,1.47e-08,5;UBERON:0000200,3.63e-08,6;UBERON:0003076,3.82e-08,15;UBERON:0003057,3.82e-08,15;UBERON:0004732,1.34e-07,13;UBERON:0002298,2.40e-07,6 | |||
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| ||
|short_description=p2@RTN3P1 | |short_description=p2@RTN3P1 | ||
}} | }} |
Latest revision as of 23:02, 15 September 2015
Short description: | p2@RTN3P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTN3P1_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 112bp_to_ENST00000536295_5end |
EntrezGene: | NA |
HGNC: | 19212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 8.20e-07 | 3 |