FFCP PHASE1:Hg19::chr3:94657049..94657061,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000462219_5end | |association_with_transcript=33bp_to_ENST00000462219_5end | ||
|cluster_id=chr3:94657049..94657061,+ | |||
|coexpression_cluster_id=C2760 | |||
|description=CAGE_peak_1_at_ENST00000462219_5end | |description=CAGE_peak_1_at_ENST00000462219_5end | ||
|id=chr3:94657049..94657061,+ | |id=chr3:94657049..94657061,+ | ||
|ontology_enrichment_celltype=CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2 | |ontology_enrichment_celltype=CL:0000054!1.82e-11!2;CL:0000137!1.82e-11!2;CL:0000092!1.82e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;5.48e-18;2!CL:0000137;5.48e-18;2!CL:0000092;5.48e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.48e-18,2;CL:0000137,5.48e-18,2;CL:0000092,5.48e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.73e-08;5 | |||
|ontology_enrichment_disease=DOID:1036!6.43e-23!8;DOID:0060085!1.53e-21!1;DOID:3165!1.53e-21!1;DOID:0060121!1.53e-21!1;DOID:2438!1.53e-21!1;DOID:4418!1.53e-21!1;DOID:200!1.82e-11!2;DOID:4305!1.82e-11!2 | |ontology_enrichment_disease=DOID:1036!6.43e-23!8;DOID:0060085!1.53e-21!1;DOID:3165!1.53e-21!1;DOID:0060121!1.53e-21!1;DOID:2438!1.53e-21!1;DOID:4418!1.53e-21!1;DOID:200!1.82e-11!2;DOID:4305!1.82e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.84e-34;1!DOID:3165;1.84e-34;1!DOID:0060121;1.84e-34;1!DOID:2438;1.84e-34;1!DOID:4418;1.84e-34;1!DOID:200;5.48e-18;2!DOID:4305;5.48e-18;2!DOID:1036;2.19e-17;8!DOID:0060072;1.12e-09;4!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.84e-34,1;DOID:3165,1.84e-34,1;DOID:0060121,1.84e-34,1;DOID:2438,1.84e-34,1;DOID:4418,1.84e-34,1;DOID:200,5.48e-18,2;DOID:4305,5.48e-18,2;DOID:1036,2.19e-17,8;DOID:0060072,1.12e-09,4;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.45e-21!1;UBERON:0009842!3.45e-21!1;UBERON:0003704!3.45e-21!1;UBERON:0001171!3.45e-21!1;UBERON:0001172!3.45e-21!1;UBERON:0000473!8.90e-11!8;UBERON:0003135!4.34e-08!11 | |ontology_enrichment_uberon=UBERON:0001282!3.45e-21!1;UBERON:0009842!3.45e-21!1;UBERON:0003704!3.45e-21!1;UBERON:0001171!3.45e-21!1;UBERON:0001172!3.45e-21!1;UBERON:0000473!8.90e-11!8;UBERON:0003135!4.34e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;7.06e-34;1!UBERON:0009842;7.06e-34;1!UBERON:0003704;7.06e-34;1!UBERON:0001171;7.06e-34;1!UBERON:0001172;7.06e-34;1!UBERON:0001280;2.89e-12;3!UBERON:0004647;2.89e-12;3!UBERON:0000014;1.12e-09;4!UBERON:0002394;1.57e-09;4!UBERON:0003928;1.57e-09;4!UBERON:0002046;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.06e-34,1;UBERON:0009842,7.06e-34,1;UBERON:0003704,7.06e-34,1;UBERON:0001171,7.06e-34,1;UBERON:0001172,7.06e-34,1;UBERON:0001280,2.89e-12,3;UBERON:0004647,2.89e-12,3;UBERON:0005171,2.89e-12,3;UBERON:0000014,1.12e-09,4;UBERON:0002046,5.73e-08,5;UBERON:0004117,5.73e-08,5;UBERON:0007689,5.73e-08,5;UBERON:0007123,5.73e-08,5;UBERON:0003091,5.73e-08,5;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0.902382642468723,1.76456280885966,1.00692952185506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55115524471361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,3.81248332774086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0.902382642468723,1.76456280885966,1.00692952185506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55115524471361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,3.81248332774086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000462219 | |short_description=p1@ENST00000462219 | ||
}} | }} |
Latest revision as of 23:55, 29 July 2015
Short description: | p1@ENST00000462219 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000462219_5end |
Coexpression cluster: | C2760_fibrous_testis_thyroid_acantholytic_cholangiocellular_chronic_acute |
Association with transcript: | 33bp_to_ENST00000462219_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.48e-18 | 2 |
osteocyte | 5.48e-18 | 2 |
osteoclast | 5.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.06e-34 | 1 |
acinus | 7.06e-34 | 1 |
intrahepatic bile duct | 7.06e-34 | 1 |
portal lobule | 7.06e-34 | 1 |
hepatic acinus | 7.06e-34 | 1 |
liver parenchyma | 2.89e-12 | 3 |
liver lobule | 2.89e-12 | 3 |
hepatic duct | 2.89e-12 | 3 |
zone of skin | 1.12e-09 | 4 |
thyroid gland | 5.73e-08 | 5 |
pharyngeal pouch | 5.73e-08 | 5 |
thyroid diverticulum | 5.73e-08 | 5 |
pharyngeal pouch 2 | 5.73e-08 | 5 |
thyroid primordium | 5.73e-08 | 5 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.84e-34 | 1 |
skin benign neoplasm | 1.84e-34 | 1 |
integumentary system benign neoplasm | 1.84e-34 | 1 |
dermis tumor | 1.84e-34 | 1 |
cutaneous fibrous histiocytoma | 1.84e-34 | 1 |
giant cell tumor | 5.48e-18 | 2 |
bone giant cell tumor | 5.48e-18 | 2 |
chronic leukemia | 2.19e-17 | 8 |
benign neoplasm | 1.12e-09 | 4 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |