FFCP PHASE1:Hg19::chr8:59572237..59572296,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522645_5end | |association_with_transcript=0bp_to_ENST00000522645_5end | ||
|cluster_id=chr8:59572237..59572296,- | |||
|description=CAGE_peak_2_at_NSMAF_5end | |description=CAGE_peak_2_at_NSMAF_5end | ||
|id=chr8:59572237..59572296,- | |id=chr8:59572237..59572296,- | ||
|ontology_enrichment_celltype=CL:0000037!6.00e-16!172;CL:0000566!6.00e-16!172;CL:0002032!1.09e-14!165;CL:0000837!1.09e-14!165;CL:0000988!3.24e-13!182;CL:0000738!6.90e-11!140;CL:0000763!7.26e-11!112;CL:0000049!7.26e-11!112;CL:0002087!2.62e-10!119;CL:0002031!1.82e-09!124;CL:0000557!2.98e-07!71;CL:0000134!5.14e-07!358;CL:0000219!5.61e-07!390;CL:0002009!9.11e-07!65 | |ontology_enrichment_celltype=CL:0000037!6.00e-16!172;CL:0000566!6.00e-16!172;CL:0002032!1.09e-14!165;CL:0000837!1.09e-14!165;CL:0000988!3.24e-13!182;CL:0000738!6.90e-11!140;CL:0000763!7.26e-11!112;CL:0000049!7.26e-11!112;CL:0002087!2.62e-10!119;CL:0002031!1.82e-09!124;CL:0000557!2.98e-07!71;CL:0000134!5.14e-07!358;CL:0000219!5.61e-07!390;CL:0002009!9.11e-07!65 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.24e-16,168;CL:0002032,9.59e-15,161;CL:0000837,9.59e-15,161;CL:0000988,1.82e-13,177;CL:0000763,5.57e-11,108;CL:0000049,5.57e-11,108;CL:0000738,6.38e-11,136;CL:0002087,2.29e-10,115;CL:0002031,1.68e-09,120;CL:0000557,2.26e-07,67;CL:0000134,4.16e-07,354;CL:0000219,4.64e-07,386;CL:0002009,6.85e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.45e-10!235;DOID:14566!5.40e-10!239;DOID:2531!2.19e-09!51;DOID:0060083!2.19e-09!51;DOID:1240!1.43e-08!39;DOID:8692!3.52e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.47e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.38e-10,235;DOID:14566,5.15e-10,239;DOID:2531,2.11e-09,51;DOID:0060083,2.11e-09,51;DOID:1240,1.38e-08,39;DOID:8692,3.37e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.60e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!1.60e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.29e-07,371 | |||
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| ||
|short_description=p2@NSMAF | |short_description=p2@NSMAF | ||
}} | }} |
Latest revision as of 15:47, 18 September 2015
Short description: | p2@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000522645_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.24e-16 | 168 |
hematopoietic oligopotent progenitor cell | 9.59e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.59e-15 | 161 |
hematopoietic cell | 1.82e-13 | 177 |
myeloid cell | 5.57e-11 | 108 |
common myeloid progenitor | 5.57e-11 | 108 |
leukocyte | 6.38e-11 | 136 |
nongranular leukocyte | 2.29e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.68e-09 | 120 |
granulocyte monocyte progenitor cell | 2.26e-07 | 67 |
mesenchymal cell | 4.16e-07 | 354 |
motile cell | 4.64e-07 | 386 |
macrophage dendritic cell progenitor | 6.85e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.29e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.38e-10 | 235 |
disease of cellular proliferation | 5.15e-10 | 239 |
hematologic cancer | 2.11e-09 | 51 |
immune system cancer | 2.11e-09 | 51 |
leukemia | 1.38e-08 | 39 |
myeloid leukemia | 3.37e-08 | 31 |