FFCP PHASE1:Hg19::chr8:13134147..13134181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10395 | |EntrezGene=10395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |HGNC=2897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-90bp_to_uc003wwl.1_5end | |association_with_transcript=-90bp_to_uc003wwl.1_5end | ||
|cluster_id=chr8:13134147..13134181,- | |||
|description=CAGE_peak_6_at_DLC1_5end | |description=CAGE_peak_6_at_DLC1_5end | ||
|id=chr8:13134147..13134181,- | |id=chr8:13134147..13134181,- | ||
|ontology_enrichment_celltype=CL:0000222!1.36e-15!119;CL:0000220!4.73e-10!246;CL:0002321!1.37e-09!248;CL:0000055!3.96e-08!180;CL:0000213!9.75e-08!57;CL:0000215!9.75e-08!57;CL:1000507!1.02e-07!12;CL:1000494!1.02e-07!12;CL:1000449!1.13e-07!16;CL:1000497!1.24e-07!18;CL:0002518!1.24e-07!18;CL:0000680!3.12e-07!57;CL:0000056!3.12e-07!57;CL:0000355!3.12e-07!57;CL:0000183!5.42e-07!59;CL:0000192!9.62e-07!42;CL:0000514!9.62e-07!42 | |ontology_enrichment_celltype=CL:0000222!1.36e-15!119;CL:0000220!4.73e-10!246;CL:0002321!1.37e-09!248;CL:0000055!3.96e-08!180;CL:0000213!9.75e-08!57;CL:0000215!9.75e-08!57;CL:1000507!1.02e-07!12;CL:1000494!1.02e-07!12;CL:1000449!1.13e-07!16;CL:1000497!1.24e-07!18;CL:0002518!1.24e-07!18;CL:0000680!3.12e-07!57;CL:0000056!3.12e-07!57;CL:0000355!3.12e-07!57;CL:0000183!5.42e-07!59;CL:0000192!9.62e-07!42;CL:0000514!9.62e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.03e-10;15!CL:1000507;2.31e-09;10!CL:1000494;2.31e-09;10!CL:0002681;2.19e-08;12!CL:0002584;2.19e-08;12!CL:1000497;3.01e-08;17!CL:0002518;3.01e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.13e-14,121;CL:1000449,9.38e-10,15;CL:1000507,2.56e-09,10;CL:1000494,2.56e-09,10;CL:0002681,4.01e-08,12;CL:0002584,4.01e-08,12;CL:0000213,4.99e-08,58;CL:0000215,4.99e-08,58;CL:1000497,5.06e-08,17;CL:0002518,5.06e-08,17;CL:0000192,8.17e-07,43;CL:0000514,8.17e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;5.03e-10;15!UBERON:0004819;5.03e-10;15!UBERON:0001285;5.03e-10;15!UBERON:0007684;5.03e-10;15!UBERON:0004211;2.31e-09;10!UBERON:0009773;2.31e-09;10!UBERON:0001231;2.31e-09;10!UBERON:0004810;2.31e-09;10!UBERON:0001225;2.19e-08;12!UBERON:0008987;2.19e-08;12!UBERON:0003914;6.34e-08;74!UBERON:0000353;1.74e-07;15 | |||
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| ||
|short_description=p6@DLC1 | |short_description=p6@DLC1 | ||
}} | }} |
Latest revision as of 09:54, 16 September 2015
Short description: | p6@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_uc003wwl.1_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.13e-14 | 121 |
epithelial cell of nephron | 9.38e-10 | 15 |
kidney tubule cell | 2.56e-09 | 10 |
nephron tubule epithelial cell | 2.56e-09 | 10 |
kidney cortical cell | 4.01e-08 | 12 |
renal cortical epithelial cell | 4.01e-08 | 12 |
lining cell | 4.99e-08 | 58 |
barrier cell | 4.99e-08 | 58 |
kidney cell | 5.06e-08 | 17 |
kidney epithelial cell | 5.06e-08 | 17 |
smooth muscle cell | 8.17e-07 | 43 |
smooth muscle myoblast | 8.17e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.52e-18 | 309 |
epithelium | 1.09e-17 | 306 |
tube | 1.71e-17 | 192 |
epithelial tube | 8.06e-17 | 117 |
anatomical conduit | 7.39e-15 | 240 |
unilaminar epithelium | 7.94e-14 | 148 |
trunk | 9.35e-10 | 199 |
nephron epithelium | 9.38e-10 | 15 |
renal tubule | 9.38e-10 | 15 |
nephron tubule | 9.38e-10 | 15 |
nephron | 9.38e-10 | 15 |
uriniferous tubule | 9.38e-10 | 15 |
nephrogenic mesenchyme | 9.38e-10 | 15 |
mesenchyme | 2.18e-09 | 160 |
entire embryonic mesenchyme | 2.18e-09 | 160 |
nephron tubule epithelium | 2.56e-09 | 10 |
trunk mesenchyme | 6.40e-09 | 122 |
vasculature | 6.68e-09 | 78 |
vascular system | 6.68e-09 | 78 |
excretory tube | 7.88e-09 | 16 |
kidney epithelium | 7.88e-09 | 16 |
abdominal segment of trunk | 3.42e-08 | 60 |
abdomen | 3.42e-08 | 60 |
cortex of kidney | 4.01e-08 | 12 |
renal parenchyma | 4.01e-08 | 12 |
abdomen element | 7.81e-08 | 54 |
abdominal segment element | 7.81e-08 | 54 |
artery | 1.89e-07 | 42 |
arterial blood vessel | 1.89e-07 | 42 |
arterial system | 1.89e-07 | 42 |
parenchyma | 2.93e-07 | 15 |
vessel | 6.13e-07 | 68 |