FFCP PHASE1:Hg19::chr7:93551356..93551375,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |EntrezGene=2791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |HGNC=4403 | ||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |UniProt=P61952,Q53Y01 | ||
|association_with_transcript=340bp_to_NM_004126,uc003und.2_5end | |association_with_transcript=340bp_to_NM_004126,uc003und.2_5end | ||
|cluster_id=chr7:93551356..93551375,+ | |||
|coexpression_cluster_id=C2004 | |||
|description=CAGE_peak_1_at_GNG11_5end | |description=CAGE_peak_1_at_GNG11_5end | ||
|id=chr7:93551356..93551375,+ | |id=chr7:93551356..93551375,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.30e-26!180;CL:0000222!3.42e-21!119;CL:0000680!1.11e-17!57;CL:0000056!1.11e-17!57;CL:0000355!1.11e-17!57;CL:0000183!2.53e-17!59;CL:0000187!9.31e-17!54;CL:0002139!5.79e-15!24;CL:0000192!7.22e-15!42;CL:0000514!7.22e-15!42;CL:0000393!8.20e-14!60;CL:0000211!8.20e-14!60;CL:0000057!1.75e-13!75;CL:0000115!2.22e-13!35;CL:0000359!4.20e-13!32;CL:0000071!2.42e-11!18;CL:0002546!2.42e-11!18;CL:0002078!2.37e-10!44 | |ontology_enrichment_celltype=CL:0000055!6.30e-26!180;CL:0000222!3.42e-21!119;CL:0000680!1.11e-17!57;CL:0000056!1.11e-17!57;CL:0000355!1.11e-17!57;CL:0000183!2.53e-17!59;CL:0000187!9.31e-17!54;CL:0002139!5.79e-15!24;CL:0000192!7.22e-15!42;CL:0000514!7.22e-15!42;CL:0000393!8.20e-14!60;CL:0000211!8.20e-14!60;CL:0000057!1.75e-13!75;CL:0000115!2.22e-13!35;CL:0000359!4.20e-13!32;CL:0000071!2.42e-11!18;CL:0002546!2.42e-11!18;CL:0002078!2.37e-10!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.72e-15;24!CL:0000359;1.05e-12;32!CL:0000115;7.15e-12;36!CL:0000071;1.76e-11;18!CL:0000192;1.64e-10;43!CL:0000187;1.35e-09;55!CL:0002078;3.50e-07;45!CL:0000393;3.90e-07;61!CL:0000211;3.90e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.76e-21,121;CL:0000680,1.79e-17,58;CL:0000056,1.79e-17,58;CL:0000355,1.79e-17,58;CL:0000187,1.55e-16,55;CL:0002139,3.73e-15,24;CL:0000192,1.42e-14,43;CL:0000514,1.42e-14,43;CL:0000115,5.53e-14,36;CL:0000057,7.06e-14,76;CL:0000393,1.81e-13,61;CL:0000211,1.81e-13,61;CL:0000359,2.88e-13,32;CL:0000071,1.76e-11,18;CL:0002546,1.76e-11,18;CL:0002078,9.09e-11,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.76e-11;18!CL:0000514;1.64e-10;43!CL:0000355;2.35e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.28e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.11e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!3.10e-35!110;UBERON:0001009!6.94e-35!113;UBERON:0002049!2.09e-28!79;UBERON:0007798!2.09e-28!79;UBERON:0000055!2.96e-27!69;UBERON:0004872!3.30e-26!84;UBERON:0001981!3.98e-24!60;UBERON:0007500!3.98e-24!60;UBERON:0004537!3.98e-24!60;UBERON:0006965!3.98e-24!60;UBERON:0000914!2.08e-21!83;UBERON:0002329!2.08e-21!83;UBERON:0003077!2.08e-21!83;UBERON:0003059!2.08e-21!83;UBERON:0007282!2.08e-21!83;UBERON:0009618!2.08e-21!83;UBERON:0007285!2.08e-21!83;UBERON:0003914!3.09e-21!118;UBERON:0004290!4.89e-21!70;UBERON:0000477!1.52e-18!286;UBERON:0001134!7.31e-18!61;UBERON:0002036!7.31e-18!61;UBERON:0003082!7.31e-18!61;UBERON:0000490!7.94e-18!138;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0001637!1.58e-17!42;UBERON:0003509!1.58e-17!42;UBERON:0004572!1.58e-17!42;UBERON:0005256!2.16e-16!143;UBERON:0000486!2.09e-15!82;UBERON:0004573!1.08e-13!33;UBERON:0004571!1.08e-13!33;UBERON:0000119!2.62e-13!312;UBERON:0002100!4.86e-13!216;UBERON:0004111!5.80e-13!241;UBERON:0000483!8.75e-13!309;UBERON:0000481!1.00e-12!347;UBERON:0000468!2.29e-12!659;UBERON:0000475!5.09e-12!365;UBERON:0003104!1.20e-11!238;UBERON:0009142!1.20e-11!238;UBERON:0001986!2.42e-11!18;UBERON:0004638!2.42e-11!18;UBERON:0004852!2.42e-11!18;UBERON:0000467!7.08e-11!625;UBERON:0000025!7.25e-11!194;UBERON:0000480!1.36e-10!626;UBERON:0000487!1.62e-10!22;UBERON:0006914!3.09e-09!25;UBERON:0000926!6.58e-09!448;UBERON:0004120!6.58e-09!448;UBERON:0006603!6.58e-09!448;UBERON:0000947!2.30e-08!21;UBERON:0010191!2.30e-08!21;UBERON:0000948!3.76e-08!24;UBERON:0005498!3.76e-08!24;UBERON:0004140!3.76e-08!24;UBERON:0009881!3.76e-08!24;UBERON:0004141!3.76e-08!24;UBERON:0003084!3.76e-08!24;UBERON:0007005!3.76e-08!24;UBERON:0004139!3.76e-08!24;UBERON:0004291!3.76e-08!24;UBERON:0007100!8.59e-08!27;UBERON:0002050!6.20e-07!605;UBERON:0005423!6.20e-07!605;UBERON:0000923!8.45e-07!604;UBERON:0005291!8.45e-07!604;UBERON:0006598!8.45e-07!604;UBERON:0002532!8.45e-07!604 | |ontology_enrichment_uberon=UBERON:0004535!3.10e-35!110;UBERON:0001009!6.94e-35!113;UBERON:0002049!2.09e-28!79;UBERON:0007798!2.09e-28!79;UBERON:0000055!2.96e-27!69;UBERON:0004872!3.30e-26!84;UBERON:0001981!3.98e-24!60;UBERON:0007500!3.98e-24!60;UBERON:0004537!3.98e-24!60;UBERON:0006965!3.98e-24!60;UBERON:0000914!2.08e-21!83;UBERON:0002329!2.08e-21!83;UBERON:0003077!2.08e-21!83;UBERON:0003059!2.08e-21!83;UBERON:0007282!2.08e-21!83;UBERON:0009618!2.08e-21!83;UBERON:0007285!2.08e-21!83;UBERON:0003914!3.09e-21!118;UBERON:0004290!4.89e-21!70;UBERON:0000477!1.52e-18!286;UBERON:0001134!7.31e-18!61;UBERON:0002036!7.31e-18!61;UBERON:0003082!7.31e-18!61;UBERON:0000490!7.94e-18!138;UBERON:0002385!1.56e-17!63;UBERON:0001015!1.56e-17!63;UBERON:0000383!1.56e-17!63;UBERON:0001637!1.58e-17!42;UBERON:0003509!1.58e-17!42;UBERON:0004572!1.58e-17!42;UBERON:0005256!2.16e-16!143;UBERON:0000486!2.09e-15!82;UBERON:0004573!1.08e-13!33;UBERON:0004571!1.08e-13!33;UBERON:0000119!2.62e-13!312;UBERON:0002100!4.86e-13!216;UBERON:0004111!5.80e-13!241;UBERON:0000483!8.75e-13!309;UBERON:0000481!1.00e-12!347;UBERON:0000468!2.29e-12!659;UBERON:0000475!5.09e-12!365;UBERON:0003104!1.20e-11!238;UBERON:0009142!1.20e-11!238;UBERON:0001986!2.42e-11!18;UBERON:0004638!2.42e-11!18;UBERON:0004852!2.42e-11!18;UBERON:0000467!7.08e-11!625;UBERON:0000025!7.25e-11!194;UBERON:0000480!1.36e-10!626;UBERON:0000487!1.62e-10!22;UBERON:0006914!3.09e-09!25;UBERON:0000926!6.58e-09!448;UBERON:0004120!6.58e-09!448;UBERON:0006603!6.58e-09!448;UBERON:0000947!2.30e-08!21;UBERON:0010191!2.30e-08!21;UBERON:0000948!3.76e-08!24;UBERON:0005498!3.76e-08!24;UBERON:0004140!3.76e-08!24;UBERON:0009881!3.76e-08!24;UBERON:0004141!3.76e-08!24;UBERON:0003084!3.76e-08!24;UBERON:0007005!3.76e-08!24;UBERON:0004139!3.76e-08!24;UBERON:0004291!3.76e-08!24;UBERON:0007100!8.59e-08!27;UBERON:0002050!6.20e-07!605;UBERON:0005423!6.20e-07!605;UBERON:0000923!8.45e-07!604;UBERON:0005291!8.45e-07!604;UBERON:0006598!8.45e-07!604;UBERON:0002532!8.45e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0000055;5.57e-13;65!UBERON:0001637;6.13e-13;42!UBERON:0003509;6.13e-13;42!UBERON:0004572;6.13e-13;42!UBERON:0007500;7.14e-13;56!UBERON:0001981;7.14e-13;56!UBERON:0004537;7.14e-13;56!UBERON:0004573;8.17e-13;33!UBERON:0004571;8.17e-13;33!UBERON:0002049;1.43e-11;75!UBERON:0007798;1.43e-11;75!UBERON:0004638;1.76e-11;18!UBERON:0001986;1.76e-11;18!UBERON:0004852;1.76e-11;18!UBERON:0000487;9.49e-11;22!UBERON:0004535;4.59e-10;109!UBERON:0003914;4.83e-10;74!UBERON:0001009;1.04e-09;112!UBERON:0006914;2.35e-09;25!UBERON:0000947;1.79e-08;21!UBERON:0010191;1.79e-08;21!UBERON:0002385;1.07e-07;31!UBERON:0001015;1.07e-07;31!UBERON:0000383;1.07e-07;31!UBERON:0000948;1.53e-07;22!UBERON:0007100;3.44e-07;25 | |||
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| ||
|short_description=p1@GNG11 | |short_description=p1@GNG11 | ||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p1@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG11_5end |
Coexpression cluster: | C2004_Endothelial_mesenchymal_Renal_Smooth_Hepatic_leiomyoma_Preadipocyte |
Association with transcript: | 340bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.76e-21 | 121 |
muscle precursor cell | 1.79e-17 | 58 |
myoblast | 1.79e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.79e-17 | 58 |
muscle cell | 1.55e-16 | 55 |
endothelial cell of vascular tree | 3.73e-15 | 24 |
smooth muscle cell | 1.42e-14 | 43 |
smooth muscle myoblast | 1.42e-14 | 43 |
endothelial cell | 5.53e-14 | 36 |
fibroblast | 7.06e-14 | 76 |
electrically responsive cell | 1.81e-13 | 61 |
electrically active cell | 1.81e-13 | 61 |
vascular associated smooth muscle cell | 2.88e-13 | 32 |
blood vessel endothelial cell | 1.76e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.76e-11 | 18 |
meso-epithelial cell | 9.09e-11 | 45 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.11e-07 | 14 |