FFCP PHASE1:Hg19::chr7:33944177..33944198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168667 | |EntrezGene=168667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |HGNC=24154 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N8U9,G5E9K4 | |UniProt=Q8N8U9,G5E9K4 | ||
|association_with_transcript=-324bp_to_ENST00000297161,ENST00000448280,NM_133468_5end | |association_with_transcript=-324bp_to_ENST00000297161,ENST00000448280,NM_133468_5end | ||
|cluster_id=chr7:33944177..33944198,+ | |||
|description=CAGE_peak_11_at_BMPER_5end | |description=CAGE_peak_11_at_BMPER_5end | ||
|id=chr7:33944177..33944198,+ | |id=chr7:33944177..33944198,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.93e-25!180;CL:0000057!2.96e-20!75;CL:0002620!2.47e-19!23;CL:0000359!3.33e-18!32;CL:0000192!7.61e-17!42;CL:0000514!7.61e-17!42;CL:0000680!9.59e-16!57;CL:0000056!9.59e-16!57;CL:0000355!9.59e-16!57;CL:0000187!7.23e-15!54;CL:0000183!1.07e-14!59;CL:0000393!2.40e-12!60;CL:0000211!2.40e-12!60;CL:0002539!4.39e-10!10;CL:0000222!9.04e-08!119;CL:0000048!6.81e-07!430 | |ontology_enrichment_celltype=CL:0000055!3.93e-25!180;CL:0000057!2.96e-20!75;CL:0002620!2.47e-19!23;CL:0000359!3.33e-18!32;CL:0000192!7.61e-17!42;CL:0000514!7.61e-17!42;CL:0000680!9.59e-16!57;CL:0000056!9.59e-16!57;CL:0000355!9.59e-16!57;CL:0000187!7.23e-15!54;CL:0000183!1.07e-14!59;CL:0000393!2.40e-12!60;CL:0000211!2.40e-12!60;CL:0002539!4.39e-10!10;CL:0000222!9.04e-08!119;CL:0000048!6.81e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.64e-24;32!CL:0002595;3.12e-17;5!CL:0000192;1.00e-15;43!CL:1000306;5.28e-13;4!CL:0002547;5.28e-13;4!CL:0002620;1.83e-10;23!CL:0002539;1.02e-08;10!CL:0002592;2.85e-08;3!CL:0000135;6.69e-08;3!CL:0000388;6.69e-08;3!CL:0002591;4.32e-07;1!CL:0000187;5.63e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.38e-26,32;CL:0000192,1.82e-18,43;CL:0000514,1.82e-18,43;CL:0002595,1.53e-17,5;CL:0000187,7.57e-14,55;CL:0000680,5.42e-13,58;CL:0000056,5.42e-13,58;CL:0000355,5.42e-13,58;CL:1000306,7.79e-13,4;CL:0002547,7.79e-13,4;CL:0000393,3.20e-12,61;CL:0000211,3.20e-12,61;CL:0000057,1.18e-10,76;CL:0002620,1.93e-10,23;CL:0002539,8.77e-09,10;CL:0000048,1.49e-08,427;CL:0000723,2.45e-08,433;CL:0002592,3.19e-08,3;CL:0000135,4.40e-08,3;CL:0000388,4.40e-08,3;CL:0000034,4.64e-08,441;CL:0002591,4.33e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-15;43 | |||
|ontology_enrichment_disease=DOID:17!4.65e-07!5;DOID:450!4.65e-07!5;DOID:66!4.65e-07!5;DOID:423!4.65e-07!5;DOID:0080000!4.65e-07!5;DOID:11722!4.65e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.69e-08;3!DOID:127;6.69e-08;3!DOID:2513;6.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.28e-08,3;DOID:127,8.28e-08,3;DOID:2513,6.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004290!8.23e-17!70;UBERON:0000486!2.32e-16!82;UBERON:0004573!4.78e-15!33;UBERON:0004571!4.78e-15!33;UBERON:0001637!5.10e-15!42;UBERON:0003509!5.10e-15!42;UBERON:0004572!5.10e-15!42;UBERON:0002385!5.15e-14!63;UBERON:0001015!5.15e-14!63;UBERON:0000383!5.15e-14!63;UBERON:0001134!5.55e-14!61;UBERON:0002036!5.55e-14!61;UBERON:0003082!5.55e-14!61;UBERON:0000914!1.09e-13!83;UBERON:0002329!1.09e-13!83;UBERON:0003077!1.09e-13!83;UBERON:0003059!1.09e-13!83;UBERON:0007282!1.09e-13!83;UBERON:0009618!1.09e-13!83;UBERON:0007285!1.09e-13!83;UBERON:0002097!9.67e-12!40;UBERON:0002199!1.09e-11!45;UBERON:0002416!1.09e-11!45;UBERON:0004872!6.33e-11!84;UBERON:0001981!1.33e-10!60;UBERON:0007500!1.33e-10!60;UBERON:0004537!1.33e-10!60;UBERON:0006965!1.33e-10!60;UBERON:0004237!4.39e-10!10;UBERON:0004695!4.39e-10!10;UBERON:0002111!4.39e-10!10;UBERON:0004178!4.39e-10!10;UBERON:0001135!7.17e-10!15;UBERON:0000055!7.01e-09!69;UBERON:0000475!2.19e-08!365;UBERON:0005256!2.49e-08!143;UBERON:0000947!2.69e-08!21;UBERON:0010191!2.69e-08!21;UBERON:0003914!1.39e-07!118;UBERON:0002100!2.55e-07!216;UBERON:0002049!2.62e-07!79;UBERON:0007798!2.62e-07!79 | |ontology_enrichment_uberon=UBERON:0004290!8.23e-17!70;UBERON:0000486!2.32e-16!82;UBERON:0004573!4.78e-15!33;UBERON:0004571!4.78e-15!33;UBERON:0001637!5.10e-15!42;UBERON:0003509!5.10e-15!42;UBERON:0004572!5.10e-15!42;UBERON:0002385!5.15e-14!63;UBERON:0001015!5.15e-14!63;UBERON:0000383!5.15e-14!63;UBERON:0001134!5.55e-14!61;UBERON:0002036!5.55e-14!61;UBERON:0003082!5.55e-14!61;UBERON:0000914!1.09e-13!83;UBERON:0002329!1.09e-13!83;UBERON:0003077!1.09e-13!83;UBERON:0003059!1.09e-13!83;UBERON:0007282!1.09e-13!83;UBERON:0009618!1.09e-13!83;UBERON:0007285!1.09e-13!83;UBERON:0002097!9.67e-12!40;UBERON:0002199!1.09e-11!45;UBERON:0002416!1.09e-11!45;UBERON:0004872!6.33e-11!84;UBERON:0001981!1.33e-10!60;UBERON:0007500!1.33e-10!60;UBERON:0004537!1.33e-10!60;UBERON:0006965!1.33e-10!60;UBERON:0004237!4.39e-10!10;UBERON:0004695!4.39e-10!10;UBERON:0002111!4.39e-10!10;UBERON:0004178!4.39e-10!10;UBERON:0001135!7.17e-10!15;UBERON:0000055!7.01e-09!69;UBERON:0000475!2.19e-08!365;UBERON:0005256!2.49e-08!143;UBERON:0000947!2.69e-08!21;UBERON:0010191!2.69e-08!21;UBERON:0003914!1.39e-07!118;UBERON:0002100!2.55e-07!216;UBERON:0002049!2.62e-07!79;UBERON:0007798!2.62e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.56e-29;33!UBERON:0004571;6.56e-29;33!UBERON:0001637;4.99e-23;42!UBERON:0003509;4.99e-23;42!UBERON:0004572;4.99e-23;42!UBERON:0003834;3.12e-17;5!UBERON:0001533;3.12e-17;5!UBERON:0004797;5.28e-13;4!UBERON:0000415;5.28e-13;4!UBERON:0007240;5.28e-13;4!UBERON:0005742;5.28e-13;4!UBERON:0005734;5.28e-13;4!UBERON:0004664;5.28e-13;4!UBERON:0004663;5.28e-13;4!UBERON:0003513;2.36e-12;7!UBERON:0000947;9.81e-12;21!UBERON:0010191;9.81e-12;21!UBERON:0007500;1.31e-09;56!UBERON:0001981;1.31e-09;56!UBERON:0004537;1.31e-09;56!UBERON:0004237;1.02e-08;10!UBERON:0004695;1.02e-08;10!UBERON:0002111;1.02e-08;10!UBERON:0004178;1.02e-08;10!UBERON:0003498;2.85e-08;3!UBERON:0005985;2.85e-08;3!UBERON:0001621;2.85e-08;3!UBERON:0000055;3.08e-08;65!UBERON:0007846;6.69e-08;3!UBERON:0000043;6.69e-08;3!UBERON:0007845;6.69e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.30e-33,33;UBERON:0004571,2.30e-33,33;UBERON:0001637,2.41e-29,42;UBERON:0003509,2.41e-29,42;UBERON:0004572,2.41e-29,42;UBERON:0007500,7.16e-20,59;UBERON:0001981,7.16e-20,59;UBERON:0004537,7.16e-20,59;UBERON:0006965,7.16e-20,59;UBERON:0003834,1.53e-17,5;UBERON:0001533,1.53e-17,5;UBERON:0000055,8.91e-17,68;UBERON:0002049,3.53e-14,78;UBERON:0007798,3.53e-14,78;UBERON:0004872,4.07e-13,83;UBERON:0000415,7.79e-13,4;UBERON:0007240,7.79e-13,4;UBERON:0005742,7.79e-13,4;UBERON:0005734,7.79e-13,4;UBERON:0004664,7.79e-13,4;UBERON:0004663,7.79e-13,4;UBERON:0003513,1.43e-12,7;UBERON:0001134,5.56e-12,62;UBERON:0002036,5.56e-12,62;UBERON:0003082,5.56e-12,62;UBERON:0000947,1.02e-11,21;UBERON:0010191,1.02e-11,21;UBERON:0002385,1.59e-11,64;UBERON:0001015,1.59e-11,64;UBERON:0000383,1.59e-11,64;UBERON:0003498,1.43e-10,5;UBERON:0005985,1.43e-10,5;UBERON:0002329,3.97e-10,71;UBERON:0003059,3.97e-10,71;UBERON:0007282,3.97e-10,71;UBERON:0004290,3.97e-10,71;UBERON:0009618,3.97e-10,71;UBERON:0003077,5.97e-10,72;UBERON:0007285,5.97e-10,72;UBERON:0007524,8.88e-10,73;UBERON:0000486,1.09e-09,83;UBERON:0003914,1.57e-09,117;UBERON:0004535,3.55e-09,109;UBERON:0007503,5.52e-09,78;UBERON:0001009,7.67e-09,112;UBERON:0004237,8.77e-09,10;UBERON:0004695,8.77e-09,10;UBERON:0002111,8.77e-09,10;UBERON:0004178,8.77e-09,10;UBERON:0001621,3.19e-08,3;UBERON:0007846,4.40e-08,3;UBERON:0000043,4.40e-08,3;UBERON:0007845,4.40e-08,3;UBERON:0002199,8.10e-08,46;UBERON:0002416,8.10e-08,46;UBERON:0004797,1.59e-07,7;UBERON:0002097,3.90e-07,41 | |||
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| ||
|short_description=p11@BMPER | |short_description=p11@BMPER | ||
}} | }} |
Latest revision as of 08:31, 18 September 2015
Short description: | p11@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_BMPER_5end |
Coexpression cluster: | NA |
Association with transcript: | -324bp_to_ENST00000297161, ENST00000448280, NM_133468_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | Q8N8U9G5E9K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.38e-26 | 32 |
smooth muscle cell | 1.82e-18 | 43 |
smooth muscle myoblast | 1.82e-18 | 43 |
smooth muscle cell of the subclavian artery | 1.53e-17 | 5 |
muscle cell | 7.57e-14 | 55 |
muscle precursor cell | 5.42e-13 | 58 |
myoblast | 5.42e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.42e-13 | 58 |
fibroblast of tunica adventitia of artery | 7.79e-13 | 4 |
fibroblast of the aortic adventitia | 7.79e-13 | 4 |
electrically responsive cell | 3.20e-12 | 61 |
electrically active cell | 3.20e-12 | 61 |
fibroblast | 1.18e-10 | 76 |
skin fibroblast | 1.93e-10 | 23 |
aortic smooth muscle cell | 8.77e-09 | 10 |
multi fate stem cell | 1.49e-08 | 427 |
somatic stem cell | 2.45e-08 | 433 |
smooth muscle cell of the coronary artery | 3.19e-08 | 3 |
fibrocyte | 4.40e-08 | 3 |
tendon cell | 4.40e-08 | 3 |
stem cell | 4.64e-08 | 441 |
smooth muscle cell of the pulmonary artery | 4.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.28e-08 | 3 |
leiomyoma | 8.28e-08 | 3 |
basal cell carcinoma | 6.08e-07 | 1 |