FFCP PHASE1:Hg19::chr7:23510430..23510452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10643 | |EntrezGene=10643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28868 | |HGNC=28868 | ||
|TSSclassifier=strong | |||
|UniProt=O00425 | |UniProt=O00425 | ||
|association_with_transcript=-344bp_to_ENST00000258729_5end | |association_with_transcript=-344bp_to_ENST00000258729_5end | ||
|cluster_id=chr7:23510430..23510452,- | |||
|description=CAGE_peak_7_at_IGF2BP3_5end | |description=CAGE_peak_7_at_IGF2BP3_5end | ||
|id=chr7:23510430..23510452,- | |id=chr7:23510430..23510452,- | ||
|ontology_enrichment_celltype=CL:0000066!4.71e-20!254;CL:0000548!8.35e-07!679;CL:0000004!8.35e-07!679;CL:0000255!8.35e-07!679 | |ontology_enrichment_celltype=CL:0000066!4.71e-20!254;CL:0000548!8.35e-07!679;CL:0000004!8.35e-07!679;CL:0000255!8.35e-07!679 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.88e-14,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.24e-09;13!UBERON:0001041;3.35e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!6.09e-34!143;DOID:305!1.51e-32!106;DOID:162!3.08e-31!235;DOID:14566!5.44e-31!239;DOID:0050686!1.46e-08!137;DOID:299!2.57e-07!25;DOID:3119!7.31e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;6.78e-11;25!DOID:305;3.30e-09;106!DOID:3119;5.24e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.74e-30,106;DOID:0050687,2.97e-25,143;DOID:14566,3.49e-17,239;DOID:162,7.77e-17,235;DOID:299,4.90e-11,25;DOID:3119,3.93e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.44e-08!155;UBERON:0001555!2.44e-08!155;UBERON:0007026!2.44e-08!155;UBERON:0004119!5.55e-08!169;UBERON:0000925!5.55e-08!169;UBERON:0006595!5.55e-08!169;UBERON:0000077!2.29e-07!130;UBERON:0003104!4.11e-07!238;UBERON:0009142!4.11e-07!238 | |ontology_enrichment_uberon=UBERON:0001007!2.44e-08!155;UBERON:0001555!2.44e-08!155;UBERON:0007026!2.44e-08!155;UBERON:0004119!5.55e-08!169;UBERON:0000925!5.55e-08!169;UBERON:0006595!5.55e-08!169;UBERON:0000077!2.29e-07!130;UBERON:0003104!4.11e-07!238;UBERON:0009142!4.11e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;3.71e-09;25!UBERON:0000344;7.48e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.21e-09,25;UBERON:0000015,2.21e-09,25;UBERON:0002423,2.21e-09,25;UBERON:0006235,2.21e-09,25;UBERON:0004161,2.21e-09,25;UBERON:0008835,7.20e-09,22;UBERON:0003894,7.20e-09,22;UBERON:0009854,2.10e-08,23;UBERON:0002394,1.29e-07,6;UBERON:0003928,1.29e-07,6;UBERON:0007499,1.38e-07,25;UBERON:0002294,1.64e-07,9;UBERON:0001173,1.64e-07,9;UBERON:0004912,1.64e-07,9;UBERON:0009856,3.18e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0.527533956456907,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0.273748850145768,0,0.534893840235659,0.328402357799783,0.629686250509434,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.567208902984407,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0.258416759169329,1.42306505074684,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0.67355336034844,0.326923806226917,0.605429710579726,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,1.02077085627447,0.368502951935304,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.505008341862199,0.750711119231785,0.554128230968366,0,0,0.150238058906597,0.567160915800105,0.179389635688862,0,0.211931901159562,0.300091096084402,0.515262646192195,0,0,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0,0.545492241181669,0.573609190778008,2.43947412259191,1.85541675650079,1.85910308591229,0.621966330092223,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.964044119533928,0.55146986366197,0.653638332277218,0.474541238222193,0.539325232640658,0.784885860501384,0.769494313892781,2.21446636387394,0,0,0,0,0,0,0,1.35287282397425,0.343135620597051,0.329250856225877,0,0,0.277765335475589,0.325808305310325,0,0,0.579652024875384,0.352226082707465,0.288732895522148,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.600686115687835,0,0.560655421726804,0.43596006883328,0.80672114403045,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0.61642896765115,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,1.20859449591622,0,0.184161977871793,0.114814448164607,0,0,0.902399225814824,0.693138033939733,0,1.46139224653261,1.05551628892876,0,0.340187410553031,0.863663664408557,1.54227252690289,0,0,0,0,0.223874754722178,0,0,1.02580050046556,0.984043937099117,0.325378394664303,1.03041011647722,0,0.082509499920588,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0.178064071293475,0.330569830721956,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0.869932992075073,0.74129687641568,0,0.372158369359667,0.949138274156178,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0.430234056612155,0.0982490410131212,0.7133421029625,0,0,0,0,0.699869440489966,0,0,0,1.12972560932135,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,2.45040215981032,0.743212700502875,0,0.213425530045242,0.318852545457645,0,0,0,0.324621940274555,0,0.456469358066384,0.47003968731907,0,0.169291777801603,0.802940375518498,0.201799707191048,0,0,0,0,0,0.390776190804081,0.278406173895242,1.23087398947712,0.270455678475983,0,0,1.68426486367398,0.146508179271894,1.45632626099416,0,0.284136146806413,0,0,0.614321404198464,0,0,0,0,0,0,0,2.77126022639704,0.20453736500431,0.123084805461069,0,1.52776196950456,1.61119057208048,0,0,0,0,0,0,0,0,0,0,1.82069517256799,0,0.945550727071745,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0.653630781113941,1.11538995422883,0,0.341826167541004,0.922255617552241,0.718061155278177,0.760531603454056,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0.498635045700469,0.225595660617181,1.17637520590644,1.51039428278258,2.84630599086278,0,0.843992258112108,2.44849212238722,1.41353071433941,0.432777279484182,0,0,0,0,0.247127877893006,0.417687798021821,0,0,0,0.364909578431332,1.36965233252463,0.971121518136371,0,0,0,0,0.60129367765797,1.24425829676697,0.664653872707185,0.330991955875499,1.56966459203613,1.19472429772959,0.569219092059585,0,1.21491816834592,0.293977192243133,0,0,0.171986032471617,1.9351266257817,1.5348756588099,2.13500188338344,0,0,0,0.685209623233754,0.794858446811959,0,0.977756913674015,1.76349404553374,0,0.39961921916426,1.72908500584927,0.80175617316141,16.4731197947486,2.16082196982225,0.248505071130865,0.235694034616795,0.271808412147228,0.523014231561666,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0.1996790004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| ||
|short_description=p7@IGF2BP3 | |short_description=p7@IGF2BP3 | ||
}} | }} |
Latest revision as of 20:51, 17 September 2015
Short description: | p7@IGF2BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IGF2BP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -344bp_to_ENST00000258729_5end |
EntrezGene: | IGF2BP3 |
HGNC: | 28868 |
UniProt: | O00425 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.88e-14 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 2.21e-09 | 25 |
anatomical boundary | 2.21e-09 | 25 |
hepatobiliary system | 2.21e-09 | 25 |
foregut-midgut junction | 2.21e-09 | 25 |
septum transversum | 2.21e-09 | 25 |
hepatic diverticulum | 7.20e-09 | 22 |
liver primordium | 7.20e-09 | 22 |
digestive tract diverticulum | 2.10e-08 | 23 |
bile duct | 1.29e-07 | 6 |
digestive system duct | 1.29e-07 | 6 |
epithelial sac | 1.38e-07 | 25 |
biliary system | 1.64e-07 | 9 |
biliary tree | 1.64e-07 | 9 |
biliary bud | 1.64e-07 | 9 |
sac | 3.18e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.74e-30 | 106 |
cell type cancer | 2.97e-25 | 143 |
disease of cellular proliferation | 3.49e-17 | 239 |
cancer | 7.77e-17 | 235 |
adenocarcinoma | 4.90e-11 | 25 |
gastrointestinal system cancer | 3.93e-09 | 14 |