FFCP PHASE1:Hg19::chr7:150721603..150721614,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285973 | |EntrezGene=285973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=21899 | |HGNC=21899 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZS8,F5GWM9,Q674R7 | |UniProt=F5GZS8,F5GWM9,Q674R7 | ||
|association_with_transcript=-17bp_to_ENST00000377974,ENST00000444312,ENST00000473409,ENST00000494791,NM_173681,uc011kvc.1_5end | |association_with_transcript=-17bp_to_ENST00000377974,ENST00000444312,ENST00000473409,ENST00000494791,NM_173681,uc011kvc.1_5end | ||
|cluster_id=chr7:150721603..150721614,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_3_at_ATG9B_5end | |description=CAGE_peak_3_at_ATG9B_5end | ||
|id=chr7:150721603..150721614,- | |id=chr7:150721603..150721614,- | ||
|ontology_enrichment_celltype=CL:0000039!1.15e-17!7;CL:0000586!1.15e-17!7;CL:0002541!1.25e-07!3;CL:0002322!6.11e-07!5 | |ontology_enrichment_celltype=CL:0000039!1.15e-17!7;CL:0000586!1.15e-17!7;CL:0002541!1.25e-07!3;CL:0002322!6.11e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.14e-40;7!CL:0000586;1.14e-40;7!CL:0000167;8.18e-07;1!CL:0000164;8.18e-07;1!CL:0000502;8.18e-07;1!CL:0000172;8.18e-07;1!CL:0000173;8.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.15e-40,7;CL:0000586,1.15e-40,7;CL:0000167,7.73e-07,1;CL:0000164,7.73e-07,1;CL:0000502,7.73e-07,1;CL:0000172,7.73e-07,1;CL:0000173,7.73e-07,1;CL:0002351,7.73e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.21e-14;10!UBERON:0005564;1.21e-14;10!UBERON:0003124;1.64e-07;1!UBERON:0009143;4.30e-07;1!CL:0002351;8.18e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.82e-15!106;DOID:0050687!2.03e-13!143;DOID:299!2.98e-08!25;DOID:162!4.20e-07!235;DOID:14566!9.42e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.66e-16;22!DOID:2994;6.66e-16;22!DOID:1799;1.86e-07;1!DOID:10165;1.86e-07;1!DOID:1798;1.86e-07;1!DOID:0050619;4.30e-07;1!DOID:1357;4.30e-07;1!DOID:3119;7.93e-07;14!DOID:3111;8.18e-07;1!DOID:3603;8.18e-07;1!DOID:4430;8.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.53e-16,22;DOID:2994,6.53e-16,22;DOID:1799,1.86e-07,1;DOID:10165,1.86e-07,1;DOID:1798,1.86e-07,1;DOID:0050619,4.57e-07,1;DOID:1357,4.57e-07,1;DOID:3119,7.23e-07,14;DOID:4430,7.73e-07,1;DOID:3111,9.73e-07,1;DOID:3603,9.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.10e-09!14;UBERON:0000158!1.10e-09!14;UBERON:0003133!2.30e-08!48;UBERON:0003124!2.52e-08!7;UBERON:0005795!3.18e-08!22;UBERON:0002294!8.91e-08!7;UBERON:0001173!8.91e-08!7;UBERON:0004912!8.91e-08!7;UBERON:0000476!1.25e-07!3;UBERON:0000920!1.25e-07!3;UBERON:0005156!4.77e-07!59;UBERON:0000990!4.77e-07!59;UBERON:0000995!5.57e-07!21;UBERON:0004175!7.15e-07!25 | |ontology_enrichment_uberon=UBERON:0005631!1.10e-09!14;UBERON:0000158!1.10e-09!14;UBERON:0003133!2.30e-08!48;UBERON:0003124!2.52e-08!7;UBERON:0005795!3.18e-08!22;UBERON:0002294!8.91e-08!7;UBERON:0001173!8.91e-08!7;UBERON:0004912!8.91e-08!7;UBERON:0000476!1.25e-07!3;UBERON:0000920!1.25e-07!3;UBERON:0005156!4.77e-07!59;UBERON:0000990!4.77e-07!59;UBERON:0000995!5.57e-07!21;UBERON:0004175!7.15e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.90e-12;8!UBERON:0000007;3.05e-12;2!UBERON:0003135;6.10e-09;11!UBERON:0005383;8.41e-09;3!UBERON:0005382;8.41e-09;3!UBERON:0004913;2.10e-07;1!UBERON:0003703;2.10e-07;1!UBERON:0001174;2.10e-07;1!UBERON:0004914;2.10e-07;1!UBERON:0001874;4.30e-07;1!UBERON:0001764;4.30e-07;1!UBERON:0001825;4.30e-07;1!UBERON:0000991;7.77e-07;21!UBERON:0000369;8.45e-07;4!UBERON:0002435;8.45e-07;4!UBERON:0000204;8.45e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.05e-12,2;UBERON:0000473,3.40e-12,8;UBERON:0003135,6.83e-09,11;UBERON:0005383,6.92e-09,3;UBERON:0005382,6.92e-09,3;UBERON:0004913,2.10e-07,1;UBERON:0003703,2.10e-07,1;UBERON:0001174,2.10e-07,1;UBERON:0004914,2.10e-07,1;UBERON:0001874,3.20e-07,1;UBERON:0001764,4.57e-07,1;UBERON:0001825,4.57e-07,1;UBERON:0005631,6.79e-07,14;UBERON:0000158,6.79e-07,14;UBERON:0000369,7.31e-07,4;UBERON:0002435,7.31e-07,4;UBERON:0000204,7.31e-07,4;UBERON:0010082,7.31e-07,4;UBERON:0000991,8.66e-07,21;UBERON:0009196,8.66e-07,21;UBERON:0009117,8.66e-07,21;UBERON:0005564,8.66e-07,21 | |||
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| ||
|short_description=p3@ATG9B | |short_description=p3@ATG9B | ||
}} | }} |
Latest revision as of 04:59, 17 September 2015
Short description: | p3@ATG9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ATG9B_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -17bp_to_ENST00000377974, ENST00000444312, ENST00000473409, ENST00000494791, NM_173681, uc011kvc.1_5end |
EntrezGene: | ATG9B |
HGNC: | 21899 |
UniProt: | F5GZS8F5GWM9Q674R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.15e-40 | 7 |
germ cell | 1.15e-40 | 7 |
peptide hormone secreting cell | 7.73e-07 | 1 |
enteroendocrine cell | 7.73e-07 | 1 |
type D enteroendocrine cell | 7.73e-07 | 1 |
somatostatin secreting cell | 7.73e-07 | 1 |
pancreatic D cell | 7.73e-07 | 1 |
progenitor cell of endocrine pancreas | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.05e-12 | 2 |
testis | 3.40e-12 | 8 |
male reproductive organ | 6.83e-09 | 11 |
caudate-putamen | 6.92e-09 | 3 |
dorsal striatum | 6.92e-09 | 3 |
hepatopancreatic ampulla | 2.10e-07 | 1 |
extrahepatic bile duct | 2.10e-07 | 1 |
common bile duct | 2.10e-07 | 1 |
duodenal papilla | 2.10e-07 | 1 |
putamen | 3.20e-07 | 1 |
maxillary sinus | 4.57e-07 | 1 |
paranasal sinus | 4.57e-07 | 1 |
extraembryonic membrane | 6.79e-07 | 14 |
membranous layer | 6.79e-07 | 14 |
corpus striatum | 7.31e-07 | 4 |
striatum | 7.31e-07 | 4 |
ventral part of telencephalon | 7.31e-07 | 4 |
future corpus striatum | 7.31e-07 | 4 |
gonad | 8.66e-07 | 21 |
indifferent external genitalia | 8.66e-07 | 21 |
indifferent gonad | 8.66e-07 | 21 |
gonad primordium | 8.66e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.53e-16 | 22 |
germ cell cancer | 6.53e-16 | 22 |
islet cell tumor | 1.86e-07 | 1 |
endocrine pancreas cancer | 1.86e-07 | 1 |
pancreatic endocrine carcinoma | 1.86e-07 | 1 |
paranasal sinus cancer | 4.57e-07 | 1 |
maxillary sinus cancer | 4.57e-07 | 1 |
gastrointestinal system cancer | 7.23e-07 | 14 |
somatostatinoma | 7.73e-07 | 1 |
cystadenocarcinoma | 9.73e-07 | 1 |
mucinous cystadenocarcinoma | 9.73e-07 | 1 |