FFCP PHASE1:Hg19::chr7:128410539..128410574,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:128410539..128410574,+ | |||
|coexpression_cluster_id=C2057 | |||
|description=CAGE_peak_at_chr7:128410539..128410574,+ | |description=CAGE_peak_at_chr7:128410539..128410574,+ | ||
|id=chr7:128410539..128410574,+ | |id=chr7:128410539..128410574,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.74e-22!180;CL:0000057!1.98e-17!75;CL:0002620!7.15e-09!23;CL:0002334!9.95e-08!12;CL:0000548!4.04e-07!679;CL:0000004!4.04e-07!679;CL:0000255!4.04e-07!679;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57 | |ontology_enrichment_celltype=CL:0000055!5.74e-22!180;CL:0000057!1.98e-17!75;CL:0002620!7.15e-09!23;CL:0002334!9.95e-08!12;CL:0000548!4.04e-07!679;CL:0000004!4.04e-07!679;CL:0000255!4.04e-07!679;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000134;7.12e-12;55!CL:0002334;1.85e-11;12!CL:0000048;3.79e-11;58!CL:0000723;1.32e-09;61!CL:0002620;3.67e-09;23!CL:0000034;1.30e-08;69!CL:0000057;1.69e-08;73!CL:0002320;3.98e-08;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.32e-23,76;CL:0000048,1.13e-16,427;CL:0000723,2.58e-16,433;CL:0000034,1.14e-15,441;CL:0002334,6.89e-12,12;CL:0002620,2.54e-09,23;CL:0000680,6.05e-09,58;CL:0000056,6.05e-09,58;CL:0000355,6.05e-09,58;CL:0000134,9.89e-09,354;CL:0000187,2.49e-08,55;CL:0002320,2.51e-08,361;CL:0000219,1.95e-07,386;CL:0000393,2.09e-07,61;CL:0000211,2.09e-07,61;CL:0000192,4.09e-07,43;CL:0000514,4.09e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.86e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.39e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.62e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.22e-08!95;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0000914!3.07e-07!83;UBERON:0002329!3.07e-07!83;UBERON:0003077!3.07e-07!83;UBERON:0003059!3.07e-07!83;UBERON:0007282!3.07e-07!83;UBERON:0009618!3.07e-07!83;UBERON:0007285!3.07e-07!83;UBERON:0002097!3.42e-07!40;UBERON:0004872!7.63e-07!84 | |ontology_enrichment_uberon=UBERON:0003102!7.22e-08!95;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0000914!3.07e-07!83;UBERON:0002329!3.07e-07!83;UBERON:0003077!3.07e-07!83;UBERON:0003059!3.07e-07!83;UBERON:0007282!3.07e-07!83;UBERON:0009618!3.07e-07!83;UBERON:0007285!3.07e-07!83;UBERON:0002097!3.42e-07!40;UBERON:0004872!7.63e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.19e-08;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.38e-08,371;UBERON:0001134,2.17e-08,62;UBERON:0002036,2.17e-08,62;UBERON:0003082,2.17e-08,62;UBERON:0002199,3.13e-08,46;UBERON:0002416,3.13e-08,46;UBERON:0002385,7.52e-08,64;UBERON:0001015,7.52e-08,64;UBERON:0000383,7.52e-08,64;UBERON:0007524,7.63e-08,73;UBERON:0002329,1.41e-07,71;UBERON:0003059,1.41e-07,71;UBERON:0007282,1.41e-07,71;UBERON:0004290,1.41e-07,71;UBERON:0009618,1.41e-07,71;UBERON:0002097,1.59e-07,41;UBERON:0003077,2.39e-07,72;UBERON:0007285,2.39e-07,72;UBERON:0000486,4.49e-07,83 | |||
|phase1_expression=5.63202975738726,6.63711624062048,6.20199378022273,5.00366491765652,0.893922188854576,8.72338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0.662794751455832,7.39557661096953,5.42425075221579,2.19093027116212,1.95173119516203,0.123121058076788,0.204000691244253,0,0,1.36874425072884,0.376627918784408,0,0.0821005894499457,0.157421562627358,0,0,0,0.919421224478927,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.637812899895131,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,2.01210257911091,1.40648818027883,10.1202962667679,0,5.06962816362883,0,2.43317435151318,0.567208902984407,1.99556457716308,0.527008714158756,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0.198762407366705,0,1.04142150482278,0,0.838998872419812,0.550236083880135,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.488124115096339,1.47065232138347,0.81014194788176,0.357198913136319,0,0,0,0,0,1.31780417436063,0,0,7.9515512271251,2.15271869829786,2.25095607382472,9.46560848471085,5.67469411517371,1.12135520028461,1.06748995729705,1.2333377420858,0.933633106199299,0.269421344139376,1.63461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,2.09228152772521,0.704606991862589,0.971237666208789,0.98315564691574,1.22492502752936,1.71968044236475,1.13658359293342,1.18800285728205,4.69807165629258,0,0,1.17835279767846,0.750711119231785,0.277064115484183,1.31693286264251,2.45190236639216,0.901428353439581,0.567160915800105,8.79009214875424,3.84403299873421,5.29829752898905,9.00273288253207,1.54578793857658,4.89517026086695,3.16398655763703,6.41350062516812,1.94874010322397,8.07788077581166,1.28869858099219,1.45481451136931,12.7803453305981,2.31729825923573,3.73033303083073,0.57978255948989,1.63647672354501,0,0.121973706129595,0.265059536642971,0.116193942869518,1.0366105501537,0.504641701751257,1.09493207722749,0,3.85944562915731,0,2.3218396401599,1.44375896333917,0.473227200159376,0.842923450390509,0.482022059766964,0.882351781859152,0.871517776369625,0.71181185733329,0.943819157121151,0.588664395376038,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,1.20725313949488,0,0.603173834469785,0,0,0,1.44331342025273,0.811512834825538,0.117408694235822,0.433099343283221,0,1.52203321787679,0,0,0.246217006087397,0,0,0,0.335964256397719,0.425325291727159,0.895585227028483,0.581267877027924,0,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,1.23392991243988,1.20137223137567,0.857479297891735,0.336393253036082,0.43596006883328,0.7333828582095,3.87815147273333,0,0.845302752556,4.5209479819428,2.08014873822732,0.771622122786426,0,0,2.7165818795048,2.17048642156577,0,0,0.355391948742546,2.37585561880029,1.20575750823834,0.871533458600294,1.79951384127703,1.2162378064119,0,0,2.63587341040741,1.14861935834114,0,1.44781306667579,2.26023954805422,0.895304816199478,0.224170287987055,0,0,0.128343036279748,1.77866236955724,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,4.78332981520856,6.24501460790066,3.6271555457805,2.10854546986884,0,0,2.0694614258501,2.65690239414175,0.368738337083406,1.21637060255316,0.195801157462741,0,0,0,0,0,1.66435439510497,1.5119514666484,3.96972492510043,4.29693525206575,9.82310330515758,4.61300937320523,3.58195074346692,4.66476371316462,1.48418066444991,3.23840356985577,1.42049380250502,1.88892458831761,2.59627214591811,2.67283870457906,0.966875596732978,2.40607764363942,0.736647911487171,0.918515585316854,4.55227920016793,3.40923478894503,0.902399225814824,0.616122696835318,0,0,0.527758144464379,0,0.510281115829547,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.976135183992909,0.206082023295445,0.732555718546747,1.07262349896764,0,0,1.6068392984416,1.25671933779759,0.770243085573222,1.07452572308291,1.65403886981437,0.751941714077915,1.88521702088497,0.767039646744908,1.06838442776085,0.991709492165869,0.576570202095319,0.255225424989168,0.2023155617111,1.85938219718914,17.6294914225158,0.6970372701606,0.616067160352178,0,0,1.48259375283136,1.28812398067792,0,2.84741482246853,0.762520775695299,0,1.28381696410176,0,0,1.43897966066652,2.19629623788844,1.17812402345686,0.202182481573316,0,0.842516912477962,0,3.89941583410055,1.05650146756755,2.72999822815972,4.10075752665767,4.52032466480971,0.551365343546124,3.3171948762061,3.06915619677634,0,0,0.405820753925408,0.92947049429925,1.12678241012897,1.29070216983646,1.3754865741837,0.35667105148125,1.77380532035299,5.6999061530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|phase1_expression=5.63202975738726,6.63711624062048,6.20199378022273,5.00366491765652,0.893922188854576,8.72338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0.662794751455832,7.39557661096953,5.42425075221579,2.19093027116212,1.95173119516203,0.123121058076788,0.204000691244253,0,0,1.36874425072884,0.376627918784408,0,0.0821005894499457,0.157421562627358,0,0,0,0.919421224478927,0,0.369754010166788,0.232401601740905,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.637812899895131,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,2.01210257911091,1.40648818027883,10.1202962667679,0,5.06962816362883,0,2.43317435151318,0.567208902984407,1.99556457716308,0.527008714158756,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0.198762407366705,0,1.04142150482278,0,0.838998872419812,0.550236083880135,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.488124115096339,1.47065232138347,0.81014194788176,0.357198913136319,0,0,0,0,0,1.31780417436063,0,0,7.9515512271251,2.15271869829786,2.25095607382472,9.46560848471085,5.67469411517371,1.12135520028461,1.06748995729705,1.2333377420858,0.933633106199299,0.269421344139376,1.63461903113459,0.605429710579726,0.576175924479999,0,0.312160076830321,0,2.09228152772521,0.704606991862589,0.971237666208789,0.98315564691574,1.22492502752936,1.71968044236475,1.13658359293342,1.18800285728205,4.69807165629258,0,0,1.17835279767846,0.750711119231785,0.277064115484183,1.31693286264251,2.45190236639216,0.901428353439581,0.567160915800105,8.79009214875424,3.84403299873421,5.29829752898905,9.00273288253207,1.54578793857658,4.89517026086695,3.16398655763703,6.41350062516812,1.94874010322397,8.07788077581166,1.28869858099219,1.45481451136931,12.7803453305981,2.31729825923573,3.73033303083073,0.57978255948989,1.63647672354501,0,0.121973706129595,0.265059536642971,0.116193942869518,1.0366105501537,0.504641701751257,1.09493207722749,0,3.85944562915731,0,2.3218396401599,1.44375896333917,0.473227200159376,0.842923450390509,0.482022059766964,0.882351781859152,0.871517776369625,0.71181185733329,0.943819157121151,0.588664395376038,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,1.20725313949488,0,0.603173834469785,0,0,0,1.44331342025273,0.811512834825538,0.117408694235822,0.433099343283221,0,1.52203321787679,0,0,0.246217006087397,0,0,0,0.335964256397719,0.425325291727159,0.895585227028483,0.581267877027924,0,0,0.088048434013226,0,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,1.23392991243988,1.20137223137567,0.857479297891735,0.336393253036082,0.43596006883328,0.7333828582095,3.87815147273333,0,0.845302752556,4.5209479819428,2.08014873822732,0.771622122786426,0,0,2.7165818795048,2.17048642156577,0,0,0.355391948742546,2.37585561880029,1.20575750823834,0.871533458600294,1.79951384127703,1.2162378064119,0,0,2.63587341040741,1.14861935834114,0,1.44781306667579,2.26023954805422,0.895304816199478,0.224170287987055,0,0,0.128343036279748,1.77866236955724,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,4.78332981520856,6.24501460790066,3.6271555457805,2.10854546986884,0,0,2.0694614258501,2.65690239414175,0.368738337083406,1.21637060255316,0.195801157462741,0,0,0,0,0,1.66435439510497,1.5119514666484,3.96972492510043,4.29693525206575,9.82310330515758,4.61300937320523,3.58195074346692,4.66476371316462,1.48418066444991,3.23840356985577,1.42049380250502,1.88892458831761,2.59627214591811,2.67283870457906,0.966875596732978,2.40607764363942,0.736647911487171,0.918515585316854,4.55227920016793,3.40923478894503,0.902399225814824,0.616122696835318,0,0,0.527758144464379,0,0.510281115829547,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0.976135183992909,0.206082023295445,0.732555718546747,1.07262349896764,0,0,1.6068392984416,1.25671933779759,0.770243085573222,1.07452572308291,1.65403886981437,0.751941714077915,1.88521702088497,0.767039646744908,1.06838442776085,0.991709492165869,0.576570202095319,0.255225424989168,0.2023155617111,1.85938219718914,17.6294914225158,0.6970372701606,0.616067160352178,0,0,1.48259375283136,1.28812398067792,0,2.84741482246853,0.762520775695299,0,1.28381696410176,0,0,1.43897966066652,2.19629623788844,1.17812402345686,0.202182481573316,0,0.842516912477962,0,3.89941583410055,1.05650146756755,2.72999822815972,4.10075752665767,4.52032466480971,0.551365343546124,3.3171948762061,3.06915619677634,0,0,0.405820753925408,0.92947049429925,1.12678241012897,1.29070216983646,1.3754865741837,0.35667105148125,1.77380532035299,5.6999061530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| ||
|short_description=p@chr7:128410539..128410574,+ | |short_description=p@chr7:128410539..128410574,+ | ||
}} | }} |
Latest revision as of 05:48, 31 July 2015
Short description: | p@chr7:128410539..128410574, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128410539..128410574, + |
Coexpression cluster: | C2057_Smooth_Fibroblast_Chondrocyte_Adipocyte_Aortic_Synoviocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.32e-23 | 76 |
multi fate stem cell | 1.13e-16 | 427 |
somatic stem cell | 2.58e-16 | 433 |
stem cell | 1.14e-15 | 441 |
preadipocyte | 6.89e-12 | 12 |
skin fibroblast | 2.54e-09 | 23 |
muscle precursor cell | 6.05e-09 | 58 |
myoblast | 6.05e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.05e-09 | 58 |
mesenchymal cell | 9.89e-09 | 354 |
muscle cell | 2.49e-08 | 55 |
connective tissue cell | 2.51e-08 | 361 |
motile cell | 1.95e-07 | 386 |
electrically responsive cell | 2.09e-07 | 61 |
electrically active cell | 2.09e-07 | 61 |
smooth muscle cell | 4.09e-07 | 43 |
smooth muscle myoblast | 4.09e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.38e-08 | 371 |
skeletal muscle tissue | 2.17e-08 | 62 |
striated muscle tissue | 2.17e-08 | 62 |
myotome | 2.17e-08 | 62 |
integument | 3.13e-08 | 46 |
integumental system | 3.13e-08 | 46 |
muscle tissue | 7.52e-08 | 64 |
musculature | 7.52e-08 | 64 |
musculature of body | 7.52e-08 | 64 |
dense mesenchyme tissue | 7.63e-08 | 73 |
somite | 1.41e-07 | 71 |
presomitic mesoderm | 1.41e-07 | 71 |
presumptive segmental plate | 1.41e-07 | 71 |
dermomyotome | 1.41e-07 | 71 |
trunk paraxial mesoderm | 1.41e-07 | 71 |
skin of body | 1.59e-07 | 41 |
paraxial mesoderm | 2.39e-07 | 72 |
presumptive paraxial mesoderm | 2.39e-07 | 72 |
multilaminar epithelium | 4.49e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.62e-11 | 14 |