FFCP PHASE1:Hg19::chr6:57086243..57086265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51715 | |EntrezGene=51715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14263 | |HGNC=14263 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC3 | |UniProt=Q9ULC3 | ||
|association_with_transcript=0bp_to_NM_183227,uc003pds.2_5end | |association_with_transcript=0bp_to_NM_183227,uc003pds.2_5end | ||
|cluster_id=chr6:57086243..57086265,- | |||
|description=CAGE_peak_2_at_RAB23_5end | |description=CAGE_peak_2_at_RAB23_5end | ||
|id=chr6:57086243..57086265,- | |id=chr6:57086243..57086265,- | ||
|ontology_enrichment_celltype=CL:0000055!1.04e-24!180;CL:0000057!8.39e-18!75;CL:0000680!1.00e-10!57;CL:0000056!1.00e-10!57;CL:0000355!1.00e-10!57;CL:0000187!2.82e-09!54;CL:0000192!1.83e-08!42;CL:0000514!1.83e-08!42;CL:0002620!7.56e-08!23;CL:0000183!1.71e-07!59;CL:0000393!3.50e-07!60;CL:0000211!3.50e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.04e-24!180;CL:0000057!8.39e-18!75;CL:0000680!1.00e-10!57;CL:0000056!1.00e-10!57;CL:0000355!1.00e-10!57;CL:0000187!2.82e-09!54;CL:0000192!1.83e-08!42;CL:0000514!1.83e-08!42;CL:0002620!7.56e-08!23;CL:0000183!1.71e-07!59;CL:0000393!3.50e-07!60;CL:0000211!3.50e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.13e-11;23!CL:0000057;7.25e-08;73!CL:0002334;9.90e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.03e-20,76;CL:0002620,1.40e-11,23;CL:0000048,2.56e-09,427;CL:0000723,7.27e-09,433;CL:0000034,2.76e-08,441;CL:0002334,7.87e-07,12;CL:0002320,8.68e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.92e-07;5!DOID:450;2.92e-07;5!DOID:66;2.92e-07;5!DOID:423;2.92e-07;5!DOID:0080000;2.92e-07;5!DOID:11722;2.92e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.15e-07,5;DOID:450,2.15e-07,5;DOID:66,2.15e-07,5;DOID:423,2.15e-07,5;DOID:0080000,2.15e-07,5;DOID:11722,2.15e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.00e-13!83;UBERON:0002329!1.00e-13!83;UBERON:0003077!1.00e-13!83;UBERON:0003059!1.00e-13!83;UBERON:0007282!1.00e-13!83;UBERON:0009618!1.00e-13!83;UBERON:0007285!1.00e-13!83;UBERON:0002385!7.20e-10!63;UBERON:0001015!7.20e-10!63;UBERON:0000383!7.20e-10!63;UBERON:0000486!2.35e-09!82;UBERON:0003102!2.78e-09!95;UBERON:0001134!3.85e-09!61;UBERON:0002036!3.85e-09!61;UBERON:0003082!3.85e-09!61;UBERON:0004290!3.89e-09!70;UBERON:0005256!7.99e-09!143;UBERON:0000075!5.99e-07!13;UBERON:0005944!5.99e-07!13;UBERON:0004288!5.99e-07!13;UBERON:0003089!5.99e-07!13 | |ontology_enrichment_uberon=UBERON:0000914!1.00e-13!83;UBERON:0002329!1.00e-13!83;UBERON:0003077!1.00e-13!83;UBERON:0003059!1.00e-13!83;UBERON:0007282!1.00e-13!83;UBERON:0009618!1.00e-13!83;UBERON:0007285!1.00e-13!83;UBERON:0002385!7.20e-10!63;UBERON:0001015!7.20e-10!63;UBERON:0000383!7.20e-10!63;UBERON:0000486!2.35e-09!82;UBERON:0003102!2.78e-09!95;UBERON:0001134!3.85e-09!61;UBERON:0002036!3.85e-09!61;UBERON:0003082!3.85e-09!61;UBERON:0004290!3.89e-09!70;UBERON:0005256!7.99e-09!143;UBERON:0000075!5.99e-07!13;UBERON:0005944!5.99e-07!13;UBERON:0004288!5.99e-07!13;UBERON:0003089!5.99e-07!13 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.28e-08,99;UBERON:0002097,1.78e-07,41;UBERON:0002384,2.23e-07,371 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.69145284915165,0,0.893922188854576,1.74467704820074,0,0,0,0.245733936501509,0,0,0,2.35156070624089,1.65698687863958,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,5.78302643815306,3.00802746381534,4.34539556882471,0,0.973269740605272,0,0.221729397462564,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,1.77883131343355,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,5.96366342034382,0.506522046658319,2.38336525463794,1.14734648299525,0.709336764396714,0,1.06748995729705,2.22000793575444,0.622422070799533,1.34710672069688,0.326923806226917,0,0,0.468642863667593,0,0,0.896692083310806,0.117434498643765,0.161872944368132,0,1.42907919878425,0.122834317311768,1.13658359293342,4.75201142912821,5.68713937340681,0,0,0.673344455816265,0.250237039743928,1.6623846929051,3.95079858792754,3.98434134538726,9.01428353439581,1.81491493056034,1.4351170855109,2.98980344345994,2.96704661623387,1.50045548042201,2.37020817248409,2.06112432036503,3.16398655763703,9.95780360223471,13.9334917380514,1.7670364197088,3.58994604704967,1.45481451136931,2.13005755509969,3.82857973265033,1.69560592310488,0.193260853163297,0.272746120590835,0,0,0,0.348581828608555,0,0,0,1.56449532329816,1.28648187638577,0,0.464367928031979,0.721879481669586,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,1.3725424823882,0.109750285408626,0,0,0,0.977424915930974,0,0,0,1.05667824812239,0.433099343283221,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.0895585227028483,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0.775630294546667,0,0.845302752556,15.1584726453376,4.16029747645464,0,0,0.266422179016099,1.00084595560703,1.62786481617433,0.823240336780769,1.30294473717494,1.06617584622764,0,0.602878754119172,11.3299349618038,0.899756920638513,0,0,0,6.46987109827273,2.29723871668228,0,8.54209709338717,0.821905290201534,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,2.71265023699736,1.03985430765404,1.24900292158013,0.157702415033935,1.17141414992713,2.10662269809403,0,1.03473071292505,3.98535359121262,0.553107505625109,3.30157734978715,0,0,0,0,0,0,1.66435439510497,0,2.48107807818777,1.84154367945675,1.40330047216537,2.94720043288112,3.58195074346692,3.53878626515936,0,0.771048469013278,0.355123450626254,1.56041596426237,2.07701771673448,0.464841513839837,0.241718899183244,0.40101294060657,0.184161977871793,3.21480454860899,3.64182336013434,6.68734516293063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.859361958946189,1.0151168573996,0.255679882248303,0.356128142586949,0.661139661443912,0,0.510450849978337,0.10115778085555,1.85938219718914,0.94443704049192,0.6970372701606,0,0,1.73986598415015,1.11194531462352,0.715624433709956,1.48863347743867,0.949138274156178,0.762520775695299,0.767693373934002,0.855877976067841,0.95460974377781,1.56989728039846,4.31693898199955,5.4907405947211,1.88499843753098,0.808729926293264,0,1.68503382495592,0,1.94970791705028,0,5.86949619054339,5.93902814205594,0,1.65409603063837,0.66343897524122,0,0.578775534266688,0.655894752046633,1.01455188481352,0.30982349809975,0,0.860468113224309,2.16147890228867,1.426684205925,1.41904425628239,4.43326034125095,9.22025700287725,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.996239941255349,0.552567831062295,0,0.102268682502155,0,19.9065336103557,0,0,0,6.90503839458535,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0.278847488557207,1.69290568708354,1.02547850262301,0,0.987334088507493,0,0,0.732780747214898,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0.706765357169704,0,0,1.06149077404007,0,2.6686901581256,0.741383633679017,0.417687798021821,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0.173559738335131,0,0,2.27144668714639,12.8989524353712,0,0,0.0821154570532092,0.484945082442097,0,0,0.685209623233754,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0.209205692624666,0.101998217636322,1.73370353940911,0,0,0,0,0,0.837847203816763,1.14580212005842,0,0.399358000997982,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,7.60199442455198,40.6184100864596,6.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| 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| ||
|short_description=p2@RAB23 | |short_description=p2@RAB23 | ||
}} | }} |
Latest revision as of 10:40, 19 September 2015
Short description: | p2@RAB23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_183227, uc003pds.2_5end |
EntrezGene: | RAB23 |
HGNC: | 14263 |
UniProt: | Q9ULC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.03e-20 | 76 |
skin fibroblast | 1.40e-11 | 23 |
multi fate stem cell | 2.56e-09 | 427 |
somatic stem cell | 7.27e-09 | 433 |
stem cell | 2.76e-08 | 441 |
preadipocyte | 7.87e-07 | 12 |
connective tissue cell | 8.68e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.28e-08 | 99 |
skin of body | 1.78e-07 | 41 |
connective tissue | 2.23e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.15e-07 | 5 |
myotonic disease | 2.15e-07 | 5 |
muscle tissue disease | 2.15e-07 | 5 |
myopathy | 2.15e-07 | 5 |
muscular disease | 2.15e-07 | 5 |
myotonic dystrophy | 2.15e-07 | 5 |