FFCP PHASE1:Hg19::chr6:50786414..50786426,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt=Q92481 | |UniProt=Q92481 | ||
|association_with_transcript=-9bp_to_ENST00000344788,ENST00000393655_5end | |association_with_transcript=-9bp_to_ENST00000344788,ENST00000393655_5end | ||
|cluster_id=chr6:50786414..50786426,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_7_at_TFAP2B_5end | |description=CAGE_peak_7_at_TFAP2B_5end | ||
|id=chr6:50786414..50786426,+ | |id=chr6:50786414..50786426,+ | ||
|ontology_enrichment_celltype=CL:0002367!1.66e-10!2;CL:0000239!4.01e-07!3;CL:1000615!4.01e-07!3;CL:0002306!4.01e-07!3 | |ontology_enrichment_celltype=CL:0002367!1.66e-10!2;CL:0000239!4.01e-07!3;CL:1000615!4.01e-07!3;CL:0002306!4.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002363;5.69e-21;2!CL:0002327;2.53e-11;4!CL:0000333;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.96e-21,2;CL:0000008,6.96e-21,2;CL:0002327,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1!CL:0000008;5.69e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;3.81e-21;2!DOID:962;3.81e-21;2!DOID:171;7.51e-17;10!DOID:1192;1.40e-14;3!DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4!DOID:3095;3.15e-08;22!DOID:2994;3.15e-08;22!DOID:169;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.81e-21,2;DOID:962,3.81e-21,2;DOID:171,7.51e-17,10;DOID:1192,1.40e-14,3;DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4;DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22;DOID:169,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003076!5.12e-18!15;UBERON:0003057!5.12e-18!15;UBERON:0004733!1.54e-17!12;UBERON:0002028!1.54e-17!12;UBERON:0007277!1.54e-17!12;UBERON:0004732!4.04e-16!13;UBERON:0001896!2.32e-14!3;UBERON:0005290!2.32e-14!3;UBERON:0010096!2.32e-14!3;UBERON:0002298!6.32e-14!8;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0005969!1.66e-10!2;UBERON:0003956!1.66e-10!2;UBERON:0004121!6.79e-10!169;UBERON:0002148!8.80e-10!2;UBERON:0009662!8.80e-10!2;UBERON:0001444!1.69e-09!48;UBERON:0002680!4.12e-08!9;UBERON:0001895!4.12e-08!9;UBERON:0010092!4.12e-08!9;UBERON:0000970!4.42e-08!20;UBERON:0000033!9.08e-08!123;UBERON:0002203!9.65e-08!6;UBERON:0001768!9.65e-08!6;UBERON:0002104!1.15e-07!21;UBERON:0000153!3.07e-07!129;UBERON:0007811!3.07e-07!129;UBERON:0006853!4.01e-07!3;UBERON:0007685!4.01e-07!3;UBERON:0004134!4.01e-07!3;UBERON:0002346!5.95e-07!90;UBERON:0000020!6.10e-07!23;UBERON:0000988!8.54e-07!3;UBERON:0006331!8.54e-07!3 | |ontology_enrichment_uberon=UBERON:0003076!5.12e-18!15;UBERON:0003057!5.12e-18!15;UBERON:0004733!1.54e-17!12;UBERON:0002028!1.54e-17!12;UBERON:0007277!1.54e-17!12;UBERON:0004732!4.04e-16!13;UBERON:0001896!2.32e-14!3;UBERON:0005290!2.32e-14!3;UBERON:0010096!2.32e-14!3;UBERON:0002298!6.32e-14!8;UBERON:0000924!1.19e-10!173;UBERON:0006601!1.19e-10!173;UBERON:0005969!1.66e-10!2;UBERON:0003956!1.66e-10!2;UBERON:0004121!6.79e-10!169;UBERON:0002148!8.80e-10!2;UBERON:0009662!8.80e-10!2;UBERON:0001444!1.69e-09!48;UBERON:0002680!4.12e-08!9;UBERON:0001895!4.12e-08!9;UBERON:0010092!4.12e-08!9;UBERON:0000970!4.42e-08!20;UBERON:0000033!9.08e-08!123;UBERON:0002203!9.65e-08!6;UBERON:0001768!9.65e-08!6;UBERON:0002104!1.15e-07!21;UBERON:0000153!3.07e-07!129;UBERON:0007811!3.07e-07!129;UBERON:0006853!4.01e-07!3;UBERON:0007685!4.01e-07!3;UBERON:0004134!4.01e-07!3;UBERON:0002346!5.95e-07!90;UBERON:0000020!6.10e-07!23;UBERON:0000988!8.54e-07!3;UBERON:0006331!8.54e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.21e-40;1!UBERON:0003714;3.81e-21;2!UBERON:0003566;5.69e-21;2!UBERON:0001777;5.69e-21;2!UBERON:0001911;2.53e-11;4!UBERON:0000014;3.42e-11;4!UBERON:0002346;3.42e-11;4!UBERON:0000923;3.42e-11;4!UBERON:0010316;3.42e-11;4!UBERON:0003891;3.42e-11;4!UBERON:0005291;3.42e-11;4!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0000013;2.74e-09;5!UBERON:0002410;2.74e-09;5!UBERON:0002050;3.22e-09;5!UBERON:0005423;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.48e-40,1;UBERON:0003714,3.81e-21,2;UBERON:0003566,6.96e-21,2;UBERON:0001777,6.96e-21,2;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0000014,3.10e-11,4;UBERON:0003891,3.79e-11,4;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5 | |||
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|short_description=p7@TFAP2B | |short_description=p7@TFAP2B | ||
}} | }} |
Latest revision as of 05:18, 19 September 2015
Short description: | p7@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TFAP2B_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -9bp_to_ENST00000344788, ENST00000393655_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | Q92481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.96e-21 | 2 |
migratory cranial neural crest cell | 6.96e-21 | 2 |
mammary gland epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
surface | 1.48e-40 | 1 |
neural tissue | 3.81e-21 | 2 |
head connective tissue | 6.96e-21 | 2 |
substantia propria of cornea | 6.96e-21 | 2 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
zone of skin | 3.10e-11 | 4 |
stroma | 3.79e-11 | 4 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
sympathetic nervous system | 2.74e-09 | 5 |
autonomic nervous system | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.81e-21 | 2 |
neurofibroma | 3.81e-21 | 2 |
neuroectodermal tumor | 7.51e-17 | 10 |
peripheral nervous system neoplasm | 1.40e-14 | 3 |
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |
neuroendocrine tumor | 5.92e-08 | 6 |