FFCP PHASE1:Hg19::chr15:67430381..67430396,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:67430381..67430396,+
|short_description=p21@SMAD3
|description=CAGE_peak_21_at_SMAD3_5end
|association_with_transcript=-176bp_to_ENST00000558739_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4088 | |EntrezGene=4088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6769 | |HGNC=6769 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-176bp_to_ENST00000558739_5end | |||
|cluster_id=chr15:67430381..67430396,+ | |||
|description=CAGE_peak_21_at_SMAD3_5end | |||
|id=chr15:67430381..67430396,+ | |||
|ontology_enrichment_celltype=CL:0000183!1.18e-18!59;CL:0000187!1.40e-16!54;CL:0000680!3.24e-16!57;CL:0000056!3.24e-16!57;CL:0000355!3.24e-16!57;CL:0000192!1.36e-15!42;CL:0000514!1.36e-15!42;CL:0000393!7.29e-14!60;CL:0000211!7.29e-14!60;CL:0000359!7.65e-13!32;CL:0000222!5.02e-12!119;CL:0000055!1.75e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002622;1.42e-13;3!CL:1000306;4.55e-10;4!CL:0002547;4.55e-10;4!CL:1000487;5.30e-10;2!CL:0002596;1.59e-09;2!CL:0002583;2.27e-09;2!CL:0002554;6.53e-09;2!CL:0000192;6.60e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.46e-13,3;CL:1000306,3.79e-10,4;CL:0002547,3.79e-10,4;CL:0000187,4.36e-10,55;CL:1000487,6.19e-10,2;CL:0000192,1.17e-09,43;CL:0000514,1.17e-09,43;CL:0002596,1.34e-09,2;CL:0002583,1.73e-09,2;CL:0000680,2.01e-09,58;CL:0000056,2.01e-09,58;CL:0000355,2.01e-09,58;CL:0002554,4.00e-09,2;CL:0000222,5.73e-09,121;CL:0000393,7.98e-09,61;CL:0000211,7.98e-09,61;CL:0000359,3.53e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.60e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.11e-19!84;UBERON:0002385!1.27e-15!63;UBERON:0001015!1.27e-15!63;UBERON:0000383!1.27e-15!63;UBERON:0001134!1.90e-15!61;UBERON:0002036!1.90e-15!61;UBERON:0003082!1.90e-15!61;UBERON:0001009!1.47e-14!113;UBERON:0004535!1.21e-13!110;UBERON:0000486!3.68e-13!82;UBERON:0001981!3.84e-13!60;UBERON:0007500!3.84e-13!60;UBERON:0004537!3.84e-13!60;UBERON:0006965!3.84e-13!60;UBERON:0003914!4.60e-13!118;UBERON:0004290!5.13e-13!70;UBERON:0007100!6.15e-13!27;UBERON:0000490!7.00e-13!138;UBERON:0002049!1.47e-12!79;UBERON:0007798!1.47e-12!79;UBERON:0000914!1.48e-12!83;UBERON:0002329!1.48e-12!83;UBERON:0003077!1.48e-12!83;UBERON:0003059!1.48e-12!83;UBERON:0007282!1.48e-12!83;UBERON:0009618!1.48e-12!83;UBERON:0007285!1.48e-12!83;UBERON:0000055!3.44e-12!69;UBERON:0001637!4.49e-12!42;UBERON:0003509!4.49e-12!42;UBERON:0004572!4.49e-12!42;UBERON:0000948!6.13e-12!24;UBERON:0005498!6.13e-12!24;UBERON:0004140!6.13e-12!24;UBERON:0009881!6.13e-12!24;UBERON:0004141!6.13e-12!24;UBERON:0003084!6.13e-12!24;UBERON:0007005!6.13e-12!24;UBERON:0004139!6.13e-12!24;UBERON:0004291!6.13e-12!24;UBERON:0005256!5.53e-11!143;UBERON:0004573!7.71e-09!33;UBERON:0004571!7.71e-09!33;UBERON:0000119!1.31e-07!312;UBERON:0004122!3.93e-07!15;UBERON:0000483!8.50e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;8.19e-13;3!UBERON:0000948;6.28e-11;22!UBERON:0004797;4.55e-10;4!UBERON:0000415;4.55e-10;4!UBERON:0007240;4.55e-10;4!UBERON:0005742;4.55e-10;4!UBERON:0005734;4.55e-10;4!UBERON:0004664;4.55e-10;4!UBERON:0004663;4.55e-10;4!UBERON:0002367;9.45e-10;11!UBERON:0010147;9.45e-10;11!UBERON:0000078;1.46e-09;2!UBERON:0002012;1.46e-09;2!UBERON:0008886;1.46e-09;2!UBERON:0005396;1.59e-09;2!UBERON:0007100;1.84e-09;25!UBERON:0002081;3.31e-09;2!UBERON:0001637;5.61e-09;42!UBERON:0003509;5.61e-09;42!UBERON:0004572;5.61e-09;42!UBERON:0003937;6.56e-09;12!UBERON:0005399;6.56e-09;12!UBERON:0004573;4.71e-07;33!UBERON:0004571;4.71e-07;33!UBERON:0000077;6.19e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.14e-15,24;UBERON:0005498,2.14e-15,24;UBERON:0004140,2.14e-15,24;UBERON:0009881,2.14e-15,24;UBERON:0004141,2.14e-15,24;UBERON:0003084,2.14e-15,24;UBERON:0007005,2.14e-15,24;UBERON:0004139,2.14e-15,24;UBERON:0004291,2.14e-15,24;UBERON:0004872,3.52e-15,83;UBERON:0007100,1.81e-13,27;UBERON:0004145,2.23e-13,3;UBERON:0004151,1.12e-12,3;UBERON:0001637,8.11e-12,42;UBERON:0003509,8.11e-12,42;UBERON:0004572,8.11e-12,42;UBERON:0004535,1.14e-11,109;UBERON:0001009,3.16e-11,112;UBERON:0003914,1.57e-10,117;UBERON:0000055,2.31e-10,68;UBERON:0000415,3.79e-10,4;UBERON:0007240,3.79e-10,4;UBERON:0005742,3.79e-10,4;UBERON:0005734,3.79e-10,4;UBERON:0004664,3.79e-10,4;UBERON:0004663,3.79e-10,4;UBERON:0004122,6.62e-10,15;UBERON:0004797,6.93e-10,7;UBERON:0002367,1.02e-09,11;UBERON:0010147,1.02e-09,11;UBERON:0009846,1.02e-09,11;UBERON:0003353,1.02e-09,11;UBERON:0004902,1.02e-09,11;UBERON:0003820,1.02e-09,11;UBERON:0009847,1.02e-09,11;UBERON:0005396,1.34e-09,2;UBERON:0000078,1.66e-09,2;UBERON:0007497,1.66e-09,2;UBERON:0003643,1.66e-09,2;UBERON:0003504,1.66e-09,2;UBERON:0003469,1.66e-09,2;UBERON:0003496,1.66e-09,2;UBERON:0002012,1.66e-09,2;UBERON:0008886,1.66e-09,2;UBERON:0007303,1.66e-09,2;UBERON:0002061,1.66e-09,2;UBERON:0005432,1.66e-09,2;UBERON:0004363,1.66e-09,2;UBERON:0007500,3.67e-09,59;UBERON:0001981,3.67e-09,59;UBERON:0004537,3.67e-09,59;UBERON:0006965,3.67e-09,59;UBERON:0002081,3.68e-09,2;UBERON:0010227,3.68e-09,2;UBERON:0000486,4.56e-09,83;UBERON:0003937,7.03e-09,12;UBERON:0005399,7.03e-09,12;UBERON:0004573,9.80e-09,33;UBERON:0004571,9.80e-09,33;UBERON:0001134,1.22e-08,62;UBERON:0002036,1.22e-08,62;UBERON:0003082,1.22e-08,62;UBERON:0002049,1.29e-08,78;UBERON:0007798,1.29e-08,78;UBERON:0003498,2.26e-08,5;UBERON:0005985,2.26e-08,5;UBERON:0002385,2.77e-08,64;UBERON:0001015,2.77e-08,64;UBERON:0000383,2.77e-08,64;UBERON:0005256,5.97e-08,122;UBERON:0004111,9.44e-08,240;UBERON:0000162,1.47e-07,14;UBERON:0001353,1.47e-07,14;UBERON:0000163,1.47e-07,14;UBERON:0006866,1.47e-07,14;UBERON:0000164,1.47e-07,14;UBERON:0000931,1.47e-07,14;UBERON:0002329,3.32e-07,71;UBERON:0003059,3.32e-07,71;UBERON:0007282,3.32e-07,71;UBERON:0004290,3.32e-07,71;UBERON:0009618,3.32e-07,71;UBERON:0003077,4.55e-07,72;UBERON:0007285,4.55e-07,72;UBERON:0007524,6.18e-07,73 | |||
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| ||
|short_description=p21@SMAD3 | |||
}} | }} |
Latest revision as of 17:24, 18 September 2015
Short description: | p21@SMAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SMAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_ENST00000558739_5end |
EntrezGene: | SMAD3 |
HGNC: | 6769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.46e-13 | 3 |
fibroblast of tunica adventitia of artery | 3.79e-10 | 4 |
fibroblast of the aortic adventitia | 3.79e-10 | 4 |
muscle cell | 4.36e-10 | 55 |
smooth muscle cell of prostate | 6.19e-10 | 2 |
smooth muscle cell | 1.17e-09 | 43 |
smooth muscle myoblast | 1.17e-09 | 43 |
smooth muscle cell of the carotid artery | 1.34e-09 | 2 |
subcutaneous preadipocyte | 1.73e-09 | 2 |
muscle precursor cell | 2.01e-09 | 58 |
myoblast | 2.01e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.01e-09 | 58 |
fibroblast of lymphatic vessel | 4.00e-09 | 2 |
mesodermal cell | 5.73e-09 | 121 |
electrically responsive cell | 7.98e-09 | 61 |
electrically active cell | 7.98e-09 | 61 |
vascular associated smooth muscle cell | 3.53e-07 | 32 |