FFCP PHASE1:Hg19::chr6:31795123..31795151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31795123..31795151,- | |||
|coexpression_cluster_id=C2784 | |||
|description=CAGE_peak_at_chr6:31795123..31795151,- | |description=CAGE_peak_at_chr6:31795123..31795151,- | ||
|id=chr6:31795123..31795151,- | |id=chr6:31795123..31795151,- | ||
|ontology_enrichment_celltype=CL:0002057!2.19e-12!42;CL:0000860!2.65e-12!45;CL:0000839!4.19e-12!70;CL:0000557!8.07e-11!71;CL:0000766!1.25e-09!76;CL:0002194!1.82e-09!63;CL:0000576!1.82e-09!63;CL:0000040!1.82e-09!63;CL:0000559!1.82e-09!63;CL:0002009!5.52e-09!65 | |ontology_enrichment_celltype=CL:0002057!2.19e-12!42;CL:0000860!2.65e-12!45;CL:0000839!4.19e-12!70;CL:0000557!8.07e-11!71;CL:0000766!1.25e-09!76;CL:0002194!1.82e-09!63;CL:0000576!1.82e-09!63;CL:0000040!1.82e-09!63;CL:0000559!1.82e-09!63;CL:0002009!5.52e-09!65 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.26e-17;5!CL:0000860;9.92e-13;33!CL:0002057;9.92e-13;33!CL:0000473;3.95e-10;39!CL:0000234;3.95e-10;39!CL:0000163;4.93e-10;9!CL:0000766;2.48e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.20e-17,5;CL:0002028,1.20e-17,5;CL:0000839,3.05e-12,66;CL:0000557,4.85e-12,67;CL:0000766,4.12e-11,72;CL:0000163,4.79e-10,9;CL:0000860,6.29e-10,42;CL:0002057,6.29e-10,42;CL:0000473,1.36e-08,48;CL:0000234,1.36e-08,48;CL:0000763,6.12e-07,108;CL:0000049,6.12e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.35e-27!115;UBERON:0001049!3.24e-15!57;UBERON:0005068!3.24e-15!57;UBERON:0006241!3.24e-15!57;UBERON:0007135!3.24e-15!57;UBERON:0001017!3.00e-14!82;UBERON:0005743!3.76e-14!86;UBERON:0000955!1.16e-12!69;UBERON:0006238!1.16e-12!69;UBERON:0002616!5.87e-12!59;UBERON:0000073!6.29e-12!94;UBERON:0001016!6.29e-12!94;UBERON:0003080!1.54e-11!42;UBERON:0002780!1.53e-10!41;UBERON:0001890!1.53e-10!41;UBERON:0006240!1.53e-10!41;UBERON:0002346!4.52e-10!90;UBERON:0003075!5.15e-10!86;UBERON:0007284!5.15e-10!86;UBERON:0000153!9.82e-10!129;UBERON:0007811!9.82e-10!129;UBERON:0002371!8.53e-09!80;UBERON:0000033!1.53e-08!123;UBERON:0002298!2.27e-08!8;UBERON:0003056!4.93e-08!61;UBERON:0001893!5.84e-08!34;UBERON:0000062!8.25e-08!511;UBERON:0002405!9.07e-08!115;UBERON:0001474!1.06e-07!86;UBERON:0002390!1.98e-07!102;UBERON:0003061!1.98e-07!102;UBERON:0002791!3.03e-07!33;UBERON:0002020!4.76e-07!34;UBERON:0003528!4.76e-07!34;UBERON:0002193!9.84e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!2.35e-27!115;UBERON:0001049!3.24e-15!57;UBERON:0005068!3.24e-15!57;UBERON:0006241!3.24e-15!57;UBERON:0007135!3.24e-15!57;UBERON:0001017!3.00e-14!82;UBERON:0005743!3.76e-14!86;UBERON:0000955!1.16e-12!69;UBERON:0006238!1.16e-12!69;UBERON:0002616!5.87e-12!59;UBERON:0000073!6.29e-12!94;UBERON:0001016!6.29e-12!94;UBERON:0003080!1.54e-11!42;UBERON:0002780!1.53e-10!41;UBERON:0001890!1.53e-10!41;UBERON:0006240!1.53e-10!41;UBERON:0002346!4.52e-10!90;UBERON:0003075!5.15e-10!86;UBERON:0007284!5.15e-10!86;UBERON:0000153!9.82e-10!129;UBERON:0007811!9.82e-10!129;UBERON:0002371!8.53e-09!80;UBERON:0000033!1.53e-08!123;UBERON:0002298!2.27e-08!8;UBERON:0003056!4.93e-08!61;UBERON:0001893!5.84e-08!34;UBERON:0000062!8.25e-08!511;UBERON:0002405!9.07e-08!115;UBERON:0001474!1.06e-07!86;UBERON:0002390!1.98e-07!102;UBERON:0003061!1.98e-07!102;UBERON:0002791!3.03e-07!33;UBERON:0002020!4.76e-07!34;UBERON:0003528!4.76e-07!34;UBERON:0002193!9.84e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;9.83e-11;1!UBERON:0002038;1.37e-10;1!UBERON:0009661;1.37e-10;1!UBERON:0002950;1.37e-10;1!UBERON:0001891;1.37e-10;1!UBERON:0004177;4.53e-08;5!UBERON:0005057;4.53e-08;5!UBERON:0002298;7.30e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,4.57e-12,93;UBERON:0002390,2.33e-11,98;UBERON:0003061,2.33e-11,98;UBERON:0000996,9.84e-11,1;UBERON:0002038,1.57e-10,1;UBERON:0009661,1.57e-10,1;UBERON:0002950,1.57e-10,1;UBERON:0001891,1.57e-10,1;UBERON:0009616,1.57e-10,1;UBERON:0010286,1.57e-10,1;UBERON:0002371,1.87e-10,76;UBERON:0002193,3.89e-10,108;UBERON:0001474,1.37e-09,82;UBERON:0004765,1.30e-08,90;UBERON:0001434,1.31e-07,100;UBERON:0002298,5.93e-07,6 | |||
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| ||
|short_description=p@chr6:31795123..31795151,- | |short_description=p@chr6:31795123..31795151,- | ||
}} | }} |
Latest revision as of 00:11, 31 July 2015
Short description: | p@chr6:31795123..31795151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31795123..31795151, - |
Coexpression cluster: | C2784_Mast_vagina_CD14_liver_medulla_thalamus_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.20e-17 | 5 |
basophil mast progenitor cell | 1.20e-17 | 5 |
myeloid lineage restricted progenitor cell | 3.05e-12 | 66 |
granulocyte monocyte progenitor cell | 4.85e-12 | 67 |
myeloid leukocyte | 4.12e-11 | 72 |
endocrine cell | 4.79e-10 | 9 |
classical monocyte | 6.29e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.29e-10 | 42 |
defensive cell | 1.36e-08 | 48 |
phagocyte | 1.36e-08 | 48 |
myeloid cell | 6.12e-07 | 108 |
common myeloid progenitor | 6.12e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
immune system | 4.57e-12 | 93 |
hematopoietic system | 2.33e-11 | 98 |
blood island | 2.33e-11 | 98 |
vagina | 9.84e-11 | 1 |
substantia nigra | 1.57e-10 | 1 |
midbrain nucleus | 1.57e-10 | 1 |
regional part of midbrain | 1.57e-10 | 1 |
midbrain | 1.57e-10 | 1 |
presumptive midbrain | 1.57e-10 | 1 |
midbrain neural tube | 1.57e-10 | 1 |
bone marrow | 1.87e-10 | 76 |
hemolymphoid system | 3.89e-10 | 108 |
bone element | 1.37e-09 | 82 |
skeletal element | 1.30e-08 | 90 |
skeletal system | 1.31e-07 | 100 |
brainstem | 5.93e-07 | 6 |