FFCP PHASE1:Hg19::chr6:22222867..22222878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:22222867..22222878,- | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr6:22222867..22222878,- | |description=CAGE_peak_at_chr6:22222867..22222878,- | ||
|id=chr6:22222867..22222878,- | |id=chr6:22222867..22222878,- | ||
|ontology_enrichment_celltype=CL:0002368!3.68e-18!13;CL:0002076!2.02e-14!43;CL:0002202!1.76e-10!9;CL:0002632!1.76e-10!9;CL:0000223!1.20e-09!59;CL:0000082!5.15e-09!19;CL:0002322!1.75e-07!5 | |ontology_enrichment_celltype=CL:0002368!3.68e-18!13;CL:0002076!2.02e-14!43;CL:0002202!1.76e-10!9;CL:0002632!1.76e-10!9;CL:0000223!1.20e-09!59;CL:0000082!5.15e-09!19;CL:0002322!1.75e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:1001319;5.16e-21;1!CL:1000600;5.16e-21;1!CL:0002368;1.61e-14;13!CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.16e-21,1;CL:1000600,5.16e-21,1;CL:0002368,1.37e-14,13;CL:0002076,5.38e-08,42;CL:0000322,5.54e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!3.37e-12!3;UBERON:0005290!3.37e-12!3;UBERON:0010096!3.37e-12!3;UBERON:0004802!5.15e-09!19;UBERON:0000115!5.15e-09!19;UBERON:0000007!8.31e-09!2;UBERON:0000065!6.70e-08!53;UBERON:0002048!1.20e-07!22;UBERON:0000117!1.20e-07!22;UBERON:0000171!1.20e-07!22;UBERON:0000170!1.20e-07!22;UBERON:0005597!1.20e-07!22;UBERON:0000118!1.20e-07!22;UBERON:0003729!2.91e-07!5 | |ontology_enrichment_uberon=UBERON:0001896!3.37e-12!3;UBERON:0005290!3.37e-12!3;UBERON:0010096!3.37e-12!3;UBERON:0004802!5.15e-09!19;UBERON:0000115!5.15e-09!19;UBERON:0000007!8.31e-09!2;UBERON:0000065!6.70e-08!53;UBERON:0002048!1.20e-07!22;UBERON:0000117!1.20e-07!22;UBERON:0000171!1.20e-07!22;UBERON:0000170!1.20e-07!22;UBERON:0005597!1.20e-07!22;UBERON:0000118!1.20e-07!22;UBERON:0003729!2.91e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.56e-27;3!UBERON:0005290;3.56e-27;3!UBERON:0004645;5.16e-21;1!UBERON:0001256;5.16e-21;1!UBERON:0001259;5.16e-21;1!UBERON:0002298;3.97e-14;6!UBERON:0001255;3.34e-11;2!UBERON:0001556;3.34e-11;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3!UBERON:0004733;1.57e-07;12!UBERON:0002028;1.57e-07;12!UBERON:0004732;5.11e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.92e-27,3;UBERON:0005290,6.92e-27,3;UBERON:0010096,6.92e-27,3;UBERON:0004645,5.16e-21,1;UBERON:0001256,5.16e-21,1;UBERON:0001259,5.16e-21,1;UBERON:0002298,5.53e-14,6;UBERON:0001255,3.35e-11,2;UBERON:0001556,3.35e-11,2;UBERON:0004821,5.54e-08,3;UBERON:0003215,5.54e-08,3;UBERON:0010368,5.54e-08,3;UBERON:0009911,5.54e-08,3;UBERON:0002299,5.54e-08,3;UBERON:0006524,5.54e-08,3;UBERON:0008874,5.54e-08,3;UBERON:0002169,5.54e-08,3;UBERON:0004894,5.54e-08,3;UBERON:0004733,1.85e-07,12;UBERON:0002028,1.85e-07,12;UBERON:0007277,1.85e-07,12;UBERON:0004732,5.94e-07,13 | |||
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| ||
|short_description=p@chr6:22222867..22222878,- | |short_description=p@chr6:22222867..22222878,- | ||
}} | }} |
Latest revision as of 22:40, 30 July 2015
Short description: | p@chr6:22222867..22222878, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:22222867..22222878, - |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.16e-21 | 1 |
lower urinary tract cell | 5.16e-21 | 1 |
respiratory epithelial cell | 1.37e-14 | 13 |
endo-epithelial cell | 5.38e-08 | 42 |
pneumocyte | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.92e-27 | 3 |
myelencephalon | 6.92e-27 | 3 |
future myelencephalon | 6.92e-27 | 3 |
urinary bladder urothelium | 5.16e-21 | 1 |
wall of urinary bladder | 5.16e-21 | 1 |
mucosa of urinary bladder | 5.16e-21 | 1 |
brainstem | 5.53e-14 | 6 |
urinary bladder | 3.35e-11 | 2 |
lower urinary tract | 3.35e-11 | 2 |
pulmonary alveolus epithelium | 5.54e-08 | 3 |
alveolus | 5.54e-08 | 3 |
pulmonary lobule | 5.54e-08 | 3 |
lobule | 5.54e-08 | 3 |
alveolus of lung | 5.54e-08 | 3 |
alveolar system | 5.54e-08 | 3 |
pulmonary acinus | 5.54e-08 | 3 |
alveolar sac | 5.54e-08 | 3 |
alveolar wall | 5.54e-08 | 3 |
segmental subdivision of hindbrain | 1.85e-07 | 12 |
hindbrain | 1.85e-07 | 12 |
presumptive hindbrain | 1.85e-07 | 12 |
segmental subdivision of nervous system | 5.94e-07 | 13 |