FFCP PHASE1:Hg19::chr6:152011695..152011709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2099 | |EntrezGene=2099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3467 | |HGNC=3467 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T5H8,P03372 | |UniProt=Q5T5H8,P03372 | ||
|association_with_transcript=64bp_to_ENST00000404742,ENST00000440973,NM_001122742,uc003qom.3_5end | |association_with_transcript=64bp_to_ENST00000404742,ENST00000440973,NM_001122742,uc003qom.3_5end | ||
|cluster_id=chr6:152011695..152011709,+ | |||
|description=CAGE_peak_6_at_ESR1_5end | |description=CAGE_peak_6_at_ESR1_5end | ||
|id=chr6:152011695..152011709,+ | |id=chr6:152011695..152011709,+ | ||
|ontology_enrichment_celltype=CL:0002087!2.45e-13!119;CL:0000945!2.40e-11!24;CL:0000826!2.40e-11!24;CL:0000542!3.48e-11!53;CL:0000051!3.48e-11!53;CL:0002031!5.35e-11!124;CL:0000838!1.01e-10!52;CL:0000738!1.12e-10!140;CL:0000236!6.70e-08!14 | |ontology_enrichment_celltype=CL:0002087!2.45e-13!119;CL:0000945!2.40e-11!24;CL:0000826!2.40e-11!24;CL:0000542!3.48e-11!53;CL:0000051!3.48e-11!53;CL:0002031!5.35e-11!124;CL:0000838!1.01e-10!52;CL:0000738!1.12e-10!140;CL:0000236!6.70e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.99e-13;24!CL:0000236;3.72e-13;13!CL:0000817;3.56e-08;1!CL:1000306;9.12e-08;4!CL:0002547;9.12e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.45e-13,24;CL:0000826,2.45e-13,24;CL:0000236,1.73e-12,14;CL:1000306,1.05e-07,4;CL:0002547,1.05e-07,4;CL:0000838,2.00e-07,52;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.40e-17;4!DOID:1612;5.40e-17;4!DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:0060060;3.56e-08;1!DOID:4960;3.56e-08;1!DOID:0060061;3.56e-08;1!DOID:0070004;3.56e-08;1!DOID:8691;3.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.43e-17,4;DOID:1612,5.43e-17,4;DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:0060060,2.02e-08,1;DOID:0060061,2.02e-08,1;DOID:8691,2.02e-08,1;DOID:4960,7.16e-08,1;DOID:0070004,7.16e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.26e-08;1!UBERON:0005795;3.56e-08;1!UBERON:0004797;9.12e-08;4!UBERON:0000415;9.12e-08;4!UBERON:0007240;9.12e-08;4!UBERON:0005742;9.12e-08;4!UBERON:0005734;9.12e-08;4!UBERON:0004664;9.12e-08;4!UBERON:0004663;9.12e-08;4!UBERON:0000310;4.46e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.31e-08,1;UBERON:0000415,1.05e-07,4;UBERON:0007240,1.05e-07,4;UBERON:0005742,1.05e-07,4;UBERON:0005734,1.05e-07,4;UBERON:0004664,1.05e-07,4;UBERON:0004663,1.05e-07,4;UBERON:0000310,4.46e-07,10 | |||
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| ||
|short_description=p6@ESR1 | |short_description=p6@ESR1 | ||
}} | }} |
Latest revision as of 05:36, 16 September 2015
Short description: | p6@ESR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ESR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENST00000404742, ENST00000440973, NM_001122742, uc003qom.3_5end |
EntrezGene: | ESR1 |
HGNC: | 3467 |
UniProt: | Q5T5H8P03372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.45e-13 | 24 |
pro-B cell | 2.45e-13 | 24 |
B cell | 1.73e-12 | 14 |
fibroblast of tunica adventitia of artery | 1.05e-07 | 4 |
fibroblast of the aortic adventitia | 1.05e-07 | 4 |
lymphoid lineage restricted progenitor cell | 2.00e-07 | 52 |
lymphocyte | 2.90e-07 | 53 |
common lymphoid progenitor | 2.90e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.31e-08 | 1 |
artery wall | 1.05e-07 | 4 |
tunica adventitia of artery | 1.05e-07 | 4 |
adventitia | 1.05e-07 | 4 |
tunica adventitia of blood vessel | 1.05e-07 | 4 |
aorta tunica adventitia | 1.05e-07 | 4 |
aorta wall | 1.05e-07 | 4 |
breast | 4.46e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.43e-17 | 4 |
breast cancer | 5.43e-17 | 4 |
chondrosarcoma | 9.79e-09 | 1 |
extraosseous chondrosarcoma | 9.79e-09 | 1 |
myxoid chondrosarcoma | 9.79e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.79e-09 | 1 |
non-Hodgkin lymphoma | 2.02e-08 | 1 |
cutaneous T cell lymphoma | 2.02e-08 | 1 |
mycosis fungoides | 2.02e-08 | 1 |
bone marrow cancer | 7.16e-08 | 1 |
myeloma | 7.16e-08 | 1 |