FFCP PHASE1:Hg19::chr6:148829780..148829823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23328 | |EntrezGene=23328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19182 | |HGNC=19182 | ||
|TSSclassifier=strong | |||
|UniProt=F5GYF4 | |UniProt=F5GYF4 | ||
|association_with_transcript=-76bp_to_ENST00000535767,uc011eeb.1_5end | |association_with_transcript=-76bp_to_ENST00000535767,uc011eeb.1_5end | ||
|cluster_id=chr6:148829780..148829823,+ | |||
|coexpression_cluster_id=C4574 | |||
|description=CAGE_peak_6_at_SASH1_5end | |description=CAGE_peak_6_at_SASH1_5end | ||
|id=chr6:148829780..148829823,+ | |id=chr6:148829780..148829823,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.64e-25!180;CL:0000057!1.99e-15!75;CL:0002620!4.22e-14!23;CL:0000136!6.32e-07!15 | |ontology_enrichment_celltype=CL:0000055!6.64e-25!180;CL:0000057!1.99e-15!75;CL:0002620!4.22e-14!23;CL:0000136!6.32e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.16e-16;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.01e-16,23;CL:0000057,1.99e-15,76;CL:0000136,2.26e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.67e-07,5;DOID:450,9.67e-07,5;DOID:66,9.67e-07,5;DOID:423,9.67e-07,5;DOID:0080000,9.67e-07,5;DOID:11722,9.67e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-20!115;UBERON:0000475!1.07e-16!365;UBERON:0001049!1.05e-15!57;UBERON:0005068!1.05e-15!57;UBERON:0006241!1.05e-15!57;UBERON:0007135!1.05e-15!57;UBERON:0002346!2.95e-14!90;UBERON:0000924!1.71e-13!173;UBERON:0006601!1.71e-13!173;UBERON:0000073!3.01e-13!94;UBERON:0001016!3.01e-13!94;UBERON:0003075!4.69e-13!86;UBERON:0007284!4.69e-13!86;UBERON:0002199!5.91e-13!45;UBERON:0002416!5.91e-13!45;UBERON:0002616!7.57e-13!59;UBERON:0001017!1.03e-12!82;UBERON:0004121!1.86e-12!169;UBERON:0003102!3.57e-12!95;UBERON:0002097!4.07e-12!40;UBERON:0005743!7.21e-12!86;UBERON:0000955!1.14e-11!69;UBERON:0006238!1.14e-11!69;UBERON:0003080!4.78e-11!42;UBERON:0000914!5.21e-11!83;UBERON:0002329!5.21e-11!83;UBERON:0003077!5.21e-11!83;UBERON:0003059!5.21e-11!83;UBERON:0007282!5.21e-11!83;UBERON:0009618!5.21e-11!83;UBERON:0007285!5.21e-11!83;UBERON:0000033!6.29e-11!123;UBERON:0000153!9.90e-11!129;UBERON:0007811!9.90e-11!129;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0000468!1.70e-09!659;UBERON:0004290!3.52e-09!70;UBERON:0001893!6.00e-09!34;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0002791!1.46e-08!33;UBERON:0003056!5.36e-08!61;UBERON:0001869!6.31e-08!32;UBERON:0000479!2.34e-07!787;UBERON:0000467!2.44e-07!625;UBERON:0000480!3.26e-07!626;UBERON:0002385!4.22e-07!63;UBERON:0001015!4.22e-07!63;UBERON:0000383!4.22e-07!63;UBERON:0000486!6.24e-07!82;UBERON:0002619!7.34e-07!22;UBERON:0000956!8.20e-07!25;UBERON:0000203!8.20e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!5.60e-20!115;UBERON:0000475!1.07e-16!365;UBERON:0001049!1.05e-15!57;UBERON:0005068!1.05e-15!57;UBERON:0006241!1.05e-15!57;UBERON:0007135!1.05e-15!57;UBERON:0002346!2.95e-14!90;UBERON:0000924!1.71e-13!173;UBERON:0006601!1.71e-13!173;UBERON:0000073!3.01e-13!94;UBERON:0001016!3.01e-13!94;UBERON:0003075!4.69e-13!86;UBERON:0007284!4.69e-13!86;UBERON:0002199!5.91e-13!45;UBERON:0002416!5.91e-13!45;UBERON:0002616!7.57e-13!59;UBERON:0001017!1.03e-12!82;UBERON:0004121!1.86e-12!169;UBERON:0003102!3.57e-12!95;UBERON:0002097!4.07e-12!40;UBERON:0005743!7.21e-12!86;UBERON:0000955!1.14e-11!69;UBERON:0006238!1.14e-11!69;UBERON:0003080!4.78e-11!42;UBERON:0000914!5.21e-11!83;UBERON:0002329!5.21e-11!83;UBERON:0003077!5.21e-11!83;UBERON:0003059!5.21e-11!83;UBERON:0007282!5.21e-11!83;UBERON:0009618!5.21e-11!83;UBERON:0007285!5.21e-11!83;UBERON:0000033!6.29e-11!123;UBERON:0000153!9.90e-11!129;UBERON:0007811!9.90e-11!129;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0000468!1.70e-09!659;UBERON:0004290!3.52e-09!70;UBERON:0001893!6.00e-09!34;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0002791!1.46e-08!33;UBERON:0003056!5.36e-08!61;UBERON:0001869!6.31e-08!32;UBERON:0000479!2.34e-07!787;UBERON:0000467!2.44e-07!625;UBERON:0000480!3.26e-07!626;UBERON:0002385!4.22e-07!63;UBERON:0001015!4.22e-07!63;UBERON:0000383!4.22e-07!63;UBERON:0000486!6.24e-07!82;UBERON:0002619!7.34e-07!22;UBERON:0000956!8.20e-07!25;UBERON:0000203!8.20e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.99e-11;41!UBERON:0002199;7.84e-10;46!UBERON:0002416;7.84e-10;46!UBERON:0003102;1.99e-08;50!UBERON:0002619;7.44e-08;22!UBERON:0000073;3.09e-07;53!UBERON:0002616;3.09e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.04e-16,114;UBERON:0002199,5.86e-15,46;UBERON:0002416,5.86e-15,46;UBERON:0002097,2.50e-14,41;UBERON:0001049,1.11e-12,56;UBERON:0005068,1.11e-12,56;UBERON:0006241,1.11e-12,56;UBERON:0007135,1.11e-12,56;UBERON:0010314,2.13e-12,132;UBERON:0002346,6.87e-11,86;UBERON:0000073,1.16e-10,53;UBERON:0002616,1.16e-10,53;UBERON:0003075,6.49e-10,82;UBERON:0007284,6.49e-10,82;UBERON:0010371,2.46e-09,104;UBERON:0003102,2.74e-09,99;UBERON:0001016,3.20e-09,89;UBERON:0001017,5.31e-09,81;UBERON:0004121,7.50e-09,171;UBERON:0000924,7.50e-09,171;UBERON:0006601,7.50e-09,171;UBERON:0002780,1.30e-08,41;UBERON:0001890,1.30e-08,41;UBERON:0003080,1.30e-08,41;UBERON:0006240,1.30e-08,41;UBERON:0002619,4.35e-08,22;UBERON:0000955,8.73e-08,68;UBERON:0006238,8.73e-08,68;UBERON:0001893,1.16e-07,34;UBERON:0003528,2.01e-07,34;UBERON:0002020,2.01e-07,34;UBERON:0001950,5.79e-07,20 | |||
|phase1_expression=1.81678379270557,1.71280419112787,2.39622486963151,0,3.5756887554183,0.872338524100369,0,1.89515962028049,8.61912573059467,0,0,0,0,1.48519623552056,0.662794751455832,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,1.10808952269109,0.408001382488506,1.25381888591235,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,6.14446559053763,10.0267582127178,5.06962816362883,7.15757352345989,5.35298357332899,0.0945348171640679,0,0.175669571386252,0.982343066232845,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.13967460498122,1.72131935057184,2.58152958673932,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.302714855289863,0,1.40592859100278,0.312160076830321,1.1409436430889,1.49448680551801,1.64408298101271,2.75184005425824,2.24721290723598,1.02077085627447,0.245668634623536,2.16984140469107,4.75201142912821,1.97813543422845,0,0,1.0100166837244,0.750711119231785,0.831192346452549,2.19488810440419,1.83892677479412,1.50238058906597,0.113432183160021,14.351170855109,5.76604949810132,5.93409323246773,6.60200411385685,10.2022003946055,7.21393512127762,4.09457083929498,11.4767905924061,7.89239741805709,10.8546522924969,7.91629128323774,4.68773564774555,13.4903645156313,6.54888638479662,2.7129694769678,0,0,0,0,0,0,0.310983165046111,0,0,4.69348596989448,2.57296375277154,2.76269842704961,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.686271241194102,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,2.15892840593375,3.81988425558278,7.03304683260282,1.71072446022705,2.67351481028641,3.90445975197093,6.28818151787272,0,0.43596006883328,0.07333828582095,0.646358578788889,10.7296933755565,0,1.06375246633948,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,0,0,0,2.87549826589899,0,0,1.15825045334063,0.205476322550383,0.895304816199478,0,0,0,0,2.7950408664471,2.60279707715243,0,0.335032530668698,0,0,0,0,0.613457458595699,0,0,0,1.60586089917446,0.788512075169673,0.468565659970853,2.70851489754947,0,0,0.664225598535437,1.10621501125022,8.34082698893595,0.391602314925481,0,0,0,0,0,0,0.907170879989041,2.97729369382532,3.99001130548962,2.52594084989766,2.17836553734692,4.60536524160033,1.12597744800525,0,0.616838775210622,1.59805552781814,4.84550220481474,1.03850885836724,4.53220475993841,0,0,0,0.68888668898764,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.824125183365091,0.82509499920588,0,0.650060246036521,0,3.38347514022427,1.07834031980251,0.460511024178389,0.275673144969061,1.82614416276065,1.16013355131383,0.852266274161009,2.04773681987496,0,0,0,0,0.464845549297286,2.20368642781448,2.7881490806424,0.616067160352178,1.06461206063404,1.73986598415015,0.9266210955196,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,2.22742273548156,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0.842516912477962,0,1.21856744815642,3.16950440270266,0.409499734223957,0.565621727814851,1.13008116620243,2.75682671773062,0.66343897524122,3.5076070820301,0,1.9676842561399,0.405820753925408,0.6196469961995,0.563391205064483,0,0.589494246078727,0,0,6.75544432952525,9.22025700287725,0.75894634753143,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,13.3322443137424,0,0,0,0,0.296964680832639,0,0,1.40669416410513,0,0,0,1.39473591775749,1.10513566212459,0,0,0,2.17727711363265,0,0,0,2.76201535783414,0,1.11136990144637,2.90799823828566,1.57705766875147,0,0,0,3.62499787717397,0,0,0,0,0.583209226766509,2.2571249341328,0,0.723578631752448,0,0.884634079449797,0.591095237907095,0.87754158861589,0,0.139423744278603,2.84715956464049,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,0.611030144933625,0,0,0,4.24627137778265,0.802577647298789,1.63985112007737,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,6.8241505998767,0,0,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,2.13375836274523,0,2.71176888936639,0,0.596143835108969,2.27918865441163,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0.209205692624666,1.22397861163586,0.866851769704557,0.600420288709789,2.32739144116388,0,0,0,5.30636562417283,2.06244381610515,2.15361907373044,0,0.858452096273142,0.89268582976749,1.94832070211506,0.720599767084807,0,0,0,0,0,0,2.38568906942791,2.179254497785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| ||
|short_description=p6@SASH1 | |short_description=p6@SASH1 | ||
}} | }} |
Latest revision as of 01:12, 16 September 2015
Short description: | p6@SASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SASH1_5end |
Coexpression cluster: | C4574_melanoma_adipose_mature_Fibroblast_mesenchymal_Chondrocyte_Synoviocyte |
Association with transcript: | -76bp_to_ENST00000535767, uc011eeb.1_5end |
EntrezGene: | SASH1 |
HGNC: | 19182 |
UniProt: | F5GYF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.01e-16 | 23 |
fibroblast | 1.99e-15 | 76 |
fat cell | 2.26e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.04e-16 | 114 |
integument | 5.86e-15 | 46 |
integumental system | 5.86e-15 | 46 |
skin of body | 2.50e-14 | 41 |
neural tube | 1.11e-12 | 56 |
neural rod | 1.11e-12 | 56 |
future spinal cord | 1.11e-12 | 56 |
neural keel | 1.11e-12 | 56 |
structure with developmental contribution from neural crest | 2.13e-12 | 132 |
neurectoderm | 6.87e-11 | 86 |
regional part of nervous system | 1.16e-10 | 53 |
regional part of brain | 1.16e-10 | 53 |
neural plate | 6.49e-10 | 82 |
presumptive neural plate | 6.49e-10 | 82 |
ecto-epithelium | 2.46e-09 | 104 |
surface structure | 2.74e-09 | 99 |
nervous system | 3.20e-09 | 89 |
central nervous system | 5.31e-09 | 81 |
ectoderm-derived structure | 7.50e-09 | 171 |
ectoderm | 7.50e-09 | 171 |
presumptive ectoderm | 7.50e-09 | 171 |
regional part of forebrain | 1.30e-08 | 41 |
forebrain | 1.30e-08 | 41 |
anterior neural tube | 1.30e-08 | 41 |
future forebrain | 1.30e-08 | 41 |
regional part of cerebral cortex | 4.35e-08 | 22 |
brain | 8.73e-08 | 68 |
future brain | 8.73e-08 | 68 |
telencephalon | 1.16e-07 | 34 |
brain grey matter | 2.01e-07 | 34 |
gray matter | 2.01e-07 | 34 |
neocortex | 5.79e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.67e-07 | 5 |
myotonic disease | 9.67e-07 | 5 |
muscle tissue disease | 9.67e-07 | 5 |
myopathy | 9.67e-07 | 5 |
muscular disease | 9.67e-07 | 5 |
myotonic dystrophy | 9.67e-07 | 5 |