FFCP PHASE1:Hg19::chr6:109196481..109196488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:109196481..109196488,+ | |||
|coexpression_cluster_id=C1218 | |||
|description=CAGE_peak_at_chr6:109196481..109196488,+ | |description=CAGE_peak_at_chr6:109196481..109196488,+ | ||
|id=chr6:109196481..109196488,+ | |id=chr6:109196481..109196488,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.01e-07!53;CL:0000051!1.01e-07!53;CL:0000034!4.77e-07!444;CL:0000048!5.55e-07!430;CL:0000838!6.15e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.01e-07!53;CL:0000051!1.01e-07!53;CL:0000034!4.77e-07!444;CL:0000048!5.55e-07!430;CL:0000838!6.15e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.16e-18;1!CL:0000786;3.16e-18;1!CL:0000054;1.57e-09;2!CL:0000137;1.57e-09;2!CL:0000092;1.57e-09;2!CL:0002092;1.67e-07;10!CL:0000945;7.54e-07;24!CL:0002573;9.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.16e-18,1;CL:0000786,3.16e-18,1;CL:0000980,3.16e-18,1;CL:0000838,2.33e-11,52;CL:0000542,3.85e-11,53;CL:0000051,3.85e-11,53;CL:0000785,8.69e-10,2;CL:0000955,8.69e-10,2;CL:0000818,8.69e-10,2;CL:0000954,8.69e-10,2;CL:0000816,8.69e-10,2;CL:0000054,1.44e-09,2;CL:0000137,1.44e-09,2;CL:0000092,1.44e-09,2;CL:0002092,1.79e-07,10;CL:0000817,6.14e-07,3;CL:0000945,8.09e-07,24;CL:0000826,8.09e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000954;8.69e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!6.86e-18!51;DOID:0060083!6.86e-18!51;DOID:0060058!1.11e-11!10;DOID:1240!3.21e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.83e-18;1!DOID:0060061;4.83e-18;1!DOID:8691;4.83e-18;1!DOID:2355;4.83e-18;1!DOID:0060085;1.03e-17;1!DOID:4960;1.03e-17;1!DOID:3165;1.03e-17;1!DOID:0060121;1.03e-17;1!DOID:2438;1.03e-17;1!DOID:0070004;1.03e-17;1!DOID:4418;1.03e-17;1!DOID:0060058;1.42e-15;10!DOID:2531;1.98e-10;51!DOID:0060083;1.98e-10;51!DOID:74;1.07e-09;2!DOID:200;1.57e-09;2!DOID:4305;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.44e-18,1;DOID:0060061,4.44e-18,1;DOID:8691,4.44e-18,1;DOID:2355,5.26e-18,1;DOID:0060085,8.72e-18,1;DOID:3165,8.72e-18,1;DOID:0060121,8.72e-18,1;DOID:2438,8.72e-18,1;DOID:4418,8.72e-18,1;DOID:4960,1.70e-17,1;DOID:0070004,1.70e-17,1;DOID:0060058,1.23e-15,10;DOID:2531,1.39e-15,51;DOID:0060083,1.39e-15,51;DOID:74,1.12e-09,2;DOID:200,1.44e-09,2;DOID:4305,1.44e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.03e-17;1!UBERON:0007195;1.03e-17;1!UBERON:0002371;6.30e-13;12!UBERON:0002405;4.86e-10;27!UBERON:0001474;8.08e-09;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.37e-18,1;UBERON:0007195,1.22e-17,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.128091319725675,0.650296737799391,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,1.24052915236078,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.430234056612155,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0,0.635020748171649,0,0.280797178113459,0.456469358066384,0.783399478865116,0,0,0.802940375518498,0,0.851692475380653,4.12206413706918,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,1.81284261649436,0,0.398495976502139,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.39100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,2.79982354196902,0.533458648470704,1.03328987796489,0,0.184105950251841,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99216735290052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.128091319725675,0.650296737799391,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,1.24052915236078,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.430234056612155,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0,0.635020748171649,0,0.280797178113459,0.456469358066384,0.783399478865116,0,0,0.802940375518498,0,0.851692475380653,4.12206413706918,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,1.81284261649436,0,0.398495976502139,0.276283915531148,0,0,0.738508832766417,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,1.39100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30929650270355,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.465788870628778,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,2.79982354196902,0.533458648470704,1.03328987796489,0,0.184105950251841,0,0,0,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99216735290052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:109196481..109196488,+ | |short_description=p@chr6:109196481..109196488,+ | ||
}} | }} |
Latest revision as of 18:07, 30 July 2015
Short description: | p@chr6:109196481..109196488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:109196481..109196488, + |
Coexpression cluster: | C1218_hairy_plasma_lymphoma_xeroderma_hereditary_mycosis_splenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.16e-18 | 1 |
plasma cell | 3.16e-18 | 1 |
plasmablast | 3.16e-18 | 1 |
lymphoid lineage restricted progenitor cell | 2.33e-11 | 52 |
lymphocyte | 3.85e-11 | 53 |
common lymphoid progenitor | 3.85e-11 | 53 |
mature B cell | 8.69e-10 | 2 |
pre-B-II cell | 8.69e-10 | 2 |
transitional stage B cell | 8.69e-10 | 2 |
small pre-B-II cell | 8.69e-10 | 2 |
immature B cell | 8.69e-10 | 2 |
bone matrix secreting cell | 1.44e-09 | 2 |
osteocyte | 1.44e-09 | 2 |
osteoclast | 1.44e-09 | 2 |
bone marrow cell | 1.79e-07 | 10 |
precursor B cell | 6.14e-07 | 3 |
lymphocyte of B lineage | 8.09e-07 | 24 |
pro-B cell | 8.09e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.37e-18 | 1 |
stroma of bone marrow | 1.22e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.44e-18 | 1 |
cutaneous T cell lymphoma | 4.44e-18 | 1 |
mycosis fungoides | 4.44e-18 | 1 |
anemia | 5.26e-18 | 1 |
organ system benign neoplasm | 8.72e-18 | 1 |
skin benign neoplasm | 8.72e-18 | 1 |
integumentary system benign neoplasm | 8.72e-18 | 1 |
dermis tumor | 8.72e-18 | 1 |
cutaneous fibrous histiocytoma | 8.72e-18 | 1 |
bone marrow cancer | 1.70e-17 | 1 |
myeloma | 1.70e-17 | 1 |
lymphoma | 1.23e-15 | 10 |
hematologic cancer | 1.39e-15 | 51 |
immune system cancer | 1.39e-15 | 51 |
hematopoietic system disease | 1.12e-09 | 2 |
giant cell tumor | 1.44e-09 | 2 |
bone giant cell tumor | 1.44e-09 | 2 |