FFCP PHASE1:Hg19::chr5:8984611..8984621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:8984611..8984621,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr5:8984611..8984621,- | |description=CAGE_peak_at_chr5:8984611..8984621,- | ||
|id=chr5:8984611..8984621,- | |id=chr5:8984611..8984621,- | ||
|ontology_enrichment_celltype=CL:0000239!5.76e-38!3;CL:1000615!5.76e-38!3;CL:0002306!5.76e-38!3;CL:1000507!1.26e-36!12;CL:1000494!1.26e-36!12;CL:0002149!1.73e-33!6;CL:0002255!1.73e-33!6;CL:1000497!4.74e-33!18;CL:0002518!4.74e-33!18;CL:1000449!1.96e-27!16;CL:0002681!1.36e-15!13;CL:0002584!1.36e-15!13;CL:0000066!6.67e-08!254;CL:0000499!1.16e-07!27 | |ontology_enrichment_celltype=CL:0000239!5.76e-38!3;CL:1000615!5.76e-38!3;CL:0002306!5.76e-38!3;CL:1000507!1.26e-36!12;CL:1000494!1.26e-36!12;CL:0002149!1.73e-33!6;CL:0002255!1.73e-33!6;CL:1000497!4.74e-33!18;CL:0002518!4.74e-33!18;CL:1000449!1.96e-27!16;CL:0002681!1.36e-15!13;CL:0002584!1.36e-15!13;CL:0000066!6.67e-08!254;CL:0000499!1.16e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.83e-37;6!CL:0002255;1.83e-37;6!CL:0000239;1.24e-09;3!CL:1000615;1.24e-09;3!CL:0002306;1.24e-09;3!CL:0000499;1.28e-08;28!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.72e-37,6;CL:0002255,1.72e-37,6;CL:0000239,1.19e-09,3;CL:1000615,1.19e-09,3;CL:0002306,1.19e-09,3;CL:0000499,1.27e-08,28;CL:1000497,8.59e-07,17;CL:0002518,8.59e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.94e-11;10 | |||
|ontology_enrichment_disease=DOID:3001!1.73e-33!6;DOID:299!1.58e-12!25;DOID:120!1.35e-11!27;DOID:193!8.60e-11!29;DOID:4468!9.87e-08!2;DOID:305!9.03e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.83e-37;6!DOID:299;2.74e-16;25!DOID:120;4.04e-15;27!DOID:193;4.12e-14;29!DOID:4468;7.30e-14;2!DOID:4556;1.60e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.72e-37,6;DOID:299,2.69e-16,25;DOID:120,3.96e-15,27;DOID:193,4.05e-14,29;DOID:4468,7.30e-14,2;DOID:305,1.83e-11,106;DOID:4556,1.81e-09,3;DOID:0050687,1.74e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0006853!5.76e-38!3;UBERON:0007685!5.76e-38!3;UBERON:0004134!5.76e-38!3;UBERON:0009773!1.26e-36!12;UBERON:0001231!1.26e-36!12;UBERON:0004810!1.26e-36!12;UBERON:0004211!1.96e-27!16;UBERON:0001285!1.96e-27!16;UBERON:0007684!1.96e-27!16;UBERON:0003220!1.96e-27!16;UBERON:0004208!1.96e-27!16;UBERON:0006555!8.25e-26!17;UBERON:0005103!8.25e-26!17;UBERON:0000083!8.25e-26!17;UBERON:0009201!8.25e-26!17;UBERON:0004819!8.25e-26!17;UBERON:0006553!8.25e-26!17;UBERON:0003074!8.25e-26!17;UBERON:0003060!8.25e-26!17;UBERON:0000080!2.29e-24!18;UBERON:0002120!2.29e-24!18;UBERON:0004875!2.29e-24!18;UBERON:0005721!2.29e-24!18;UBERON:0005754!2.29e-24!18;UBERON:0007297!2.29e-24!18;UBERON:0004876!6.56e-22!20;UBERON:0002113!6.87e-22!27;UBERON:0003918!6.87e-22!27;UBERON:0005095!6.87e-22!27;UBERON:0007687!6.87e-22!27;UBERON:0003887!7.41e-21!21;UBERON:0000489!2.15e-18!32;UBERON:0000058!8.44e-17!26;UBERON:0001225!1.36e-15!13;UBERON:0008987!1.36e-15!13;UBERON:0006554!3.11e-13!44;UBERON:0001008!6.30e-13!45;UBERON:0001851!1.01e-12!16;UBERON:0000353!5.45e-12!17;UBERON:0003064!1.01e-11!37;UBERON:0005172!1.79e-10!55;UBERON:0005173!1.79e-10!55;UBERON:0000995!8.59e-10!21;UBERON:0002417!2.20e-09!61;UBERON:0000916!2.20e-09!61;UBERON:0005795!2.34e-09!22;UBERON:0003975!2.34e-09!22;UBERON:0004175!2.94e-08!25;UBERON:0003103!3.17e-08!69;UBERON:0003886!9.77e-07!63 | |ontology_enrichment_uberon=UBERON:0006853!5.76e-38!3;UBERON:0007685!5.76e-38!3;UBERON:0004134!5.76e-38!3;UBERON:0009773!1.26e-36!12;UBERON:0001231!1.26e-36!12;UBERON:0004810!1.26e-36!12;UBERON:0004211!1.96e-27!16;UBERON:0001285!1.96e-27!16;UBERON:0007684!1.96e-27!16;UBERON:0003220!1.96e-27!16;UBERON:0004208!1.96e-27!16;UBERON:0006555!8.25e-26!17;UBERON:0005103!8.25e-26!17;UBERON:0000083!8.25e-26!17;UBERON:0009201!8.25e-26!17;UBERON:0004819!8.25e-26!17;UBERON:0006553!8.25e-26!17;UBERON:0003074!8.25e-26!17;UBERON:0003060!8.25e-26!17;UBERON:0000080!2.29e-24!18;UBERON:0002120!2.29e-24!18;UBERON:0004875!2.29e-24!18;UBERON:0005721!2.29e-24!18;UBERON:0005754!2.29e-24!18;UBERON:0007297!2.29e-24!18;UBERON:0004876!6.56e-22!20;UBERON:0002113!6.87e-22!27;UBERON:0003918!6.87e-22!27;UBERON:0005095!6.87e-22!27;UBERON:0007687!6.87e-22!27;UBERON:0003887!7.41e-21!21;UBERON:0000489!2.15e-18!32;UBERON:0000058!8.44e-17!26;UBERON:0001225!1.36e-15!13;UBERON:0008987!1.36e-15!13;UBERON:0006554!3.11e-13!44;UBERON:0001008!6.30e-13!45;UBERON:0001851!1.01e-12!16;UBERON:0000353!5.45e-12!17;UBERON:0003064!1.01e-11!37;UBERON:0005172!1.79e-10!55;UBERON:0005173!1.79e-10!55;UBERON:0000995!8.59e-10!21;UBERON:0002417!2.20e-09!61;UBERON:0000916!2.20e-09!61;UBERON:0005795!2.34e-09!22;UBERON:0003975!2.34e-09!22;UBERON:0004175!2.94e-08!25;UBERON:0003103!3.17e-08!69;UBERON:0003886!9.77e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000995;9.32e-14;17!UBERON:0003975;4.93e-13;18!UBERON:0004175;2.85e-11;21!UBERON:0006853;1.24e-09;3!UBERON:0007685;1.24e-09;3!UBERON:0004134;1.24e-09;3!UBERON:0003134;4.38e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.80e-11,21;UBERON:0005795,8.48e-11,22;UBERON:0003975,8.48e-11,22;UBERON:0006853,1.19e-09,3;UBERON:0007685,1.19e-09,3;UBERON:0004134,1.19e-09,3;UBERON:0004175,1.39e-09,25 | |||
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|short_description=p@chr5:8984611..8984621,- | |short_description=p@chr5:8984611..8984621,- | ||
}} | }} |
Latest revision as of 17:12, 30 July 2015
Short description: | p@chr5:8984611..8984621, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:8984611..8984621, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.72e-37 | 6 |
stromal cell of endometrium | 1.72e-37 | 6 |
brush border epithelial cell | 1.19e-09 | 3 |
kidney cortex tubule cell | 1.19e-09 | 3 |
epithelial cell of proximal tubule | 1.19e-09 | 3 |
stromal cell | 1.27e-08 | 28 |
kidney cell | 8.59e-07 | 17 |
kidney epithelial cell | 8.59e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
uterus | 2.80e-11 | 21 |
embryonic uterus | 8.48e-11 | 22 |
internal female genitalia | 8.48e-11 | 22 |
renal cortex tubule | 1.19e-09 | 3 |
region of nephron tubule | 1.19e-09 | 3 |
proximal tubule | 1.19e-09 | 3 |
internal genitalia | 1.39e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.72e-37 | 6 |
adenocarcinoma | 2.69e-16 | 25 |
female reproductive organ cancer | 3.96e-15 | 27 |
reproductive organ cancer | 4.05e-14 | 29 |
clear cell adenocarcinoma | 7.30e-14 | 2 |
carcinoma | 1.83e-11 | 106 |
lung large cell carcinoma | 1.81e-09 | 3 |
cell type cancer | 1.74e-08 | 143 |