FFCP PHASE1:Hg19::chr5:77072305..77072314,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6902 | |EntrezGene=6902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11579 | |HGNC=11579 | ||
|TSSclassifier=strong | |||
|UniProt=O75347,Q6FGD7 | |UniProt=O75347,Q6FGD7 | ||
|association_with_transcript=-120bp_to_ENST00000380377,NM_004607,uc003kfh.1,uc003kfi.1_5end | |association_with_transcript=-120bp_to_ENST00000380377,NM_004607,uc003kfh.1,uc003kfi.1_5end | ||
|cluster_id=chr5:77072305..77072314,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_6_at_TBCA_5end | |description=CAGE_peak_6_at_TBCA_5end | ||
|id=chr5:77072305..77072314,- | |id=chr5:77072305..77072314,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!2.34e-79!2;UBERON:0002757!2.34e-79!2;UBERON:0010134!2.34e-79!2;UBERON:0002784!2.34e-79!2;UBERON:0005408!2.34e-79!2;UBERON:0001899!2.34e-79!2;UBERON:0003296!2.22e-40!4;UBERON:0010133!2.22e-40!4;UBERON:0001894!1.28e-23!7;UBERON:0006222!1.28e-23!7;UBERON:0002360!4.66e-21!2;UBERON:0000094!4.66e-21!2;UBERON:0007645!4.66e-21!2;UBERON:0001017!3.33e-08!82;UBERON:0003075!6.09e-08!86;UBERON:0007284!6.09e-08!86;UBERON:0002037!7.25e-08!6;UBERON:0006215!7.25e-08!6;UBERON:0005743!7.38e-08!86;UBERON:0002346!1.28e-07!90;UBERON:0000073!3.50e-07!94;UBERON:0001016!3.50e-07!94;UBERON:0001049!6.27e-07!57;UBERON:0005068!6.27e-07!57;UBERON:0006241!6.27e-07!57;UBERON:0007135!6.27e-07!57 | |ontology_enrichment_uberon=UBERON:0001905!2.34e-79!2;UBERON:0002757!2.34e-79!2;UBERON:0010134!2.34e-79!2;UBERON:0002784!2.34e-79!2;UBERON:0005408!2.34e-79!2;UBERON:0001899!2.34e-79!2;UBERON:0003296!2.22e-40!4;UBERON:0010133!2.22e-40!4;UBERON:0001894!1.28e-23!7;UBERON:0006222!1.28e-23!7;UBERON:0002360!4.66e-21!2;UBERON:0000094!4.66e-21!2;UBERON:0007645!4.66e-21!2;UBERON:0001017!3.33e-08!82;UBERON:0003075!6.09e-08!86;UBERON:0007284!6.09e-08!86;UBERON:0002037!7.25e-08!6;UBERON:0006215!7.25e-08!6;UBERON:0005743!7.38e-08!86;UBERON:0002346!1.28e-07!90;UBERON:0000073!3.50e-07!94;UBERON:0001016!3.50e-07!94;UBERON:0001049!6.27e-07!57;UBERON:0005068!6.27e-07!57;UBERON:0006241!6.27e-07!57;UBERON:0007135!6.27e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;3.10e-50;4!UBERON:0010133;3.10e-50;4!UBERON:0002784;3.10e-50;4!UBERON:0001894;1.78e-29;7!UBERON:0002368;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0003296,3.10e-50,4;UBERON:0010133,3.10e-50,4;UBERON:0002784,3.10e-50,4;UBERON:0001894,1.78e-29,7;UBERON:0006222,1.78e-29,7;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p6@TBCA | |short_description=p6@TBCA | ||
}} | }} |
Latest revision as of 19:36, 18 September 2015
Short description: | p6@TBCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TBCA_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -120bp_to_ENST00000380377, NM_004607, uc003kfh.1, uc003kfi.1_5end |
EntrezGene: | TBCA |
HGNC: | 11579 |
UniProt: | O75347Q6FGD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
gland of diencephalon | 3.10e-50 | 4 |
neuroendocrine gland | 3.10e-50 | 4 |
regional part of diencephalon | 3.10e-50 | 4 |
diencephalon | 1.78e-29 | 7 |
future diencephalon | 1.78e-29 | 7 |
endocrine gland | 4.03e-07 | 35 |