FFCP PHASE1:Hg19::chr5:65222472..65222496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55914 | |EntrezGene=55914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15842 | |HGNC=15842 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000380938_5end | |association_with_transcript=34bp_to_ENST00000380938_5end | ||
|cluster_id=chr5:65222472..65222496,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_ERBB2IP_5end | |description=CAGE_peak_4_at_ERBB2IP_5end | ||
|id=chr5:65222472..65222496,+ | |id=chr5:65222472..65222496,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.72e-28!76;CL:0002057!1.73e-26!42;CL:0000839!5.50e-25!70;CL:0000557!1.05e-24!71;CL:0002009!7.09e-24!65;CL:0000860!8.41e-24!45;CL:0002194!1.06e-22!63;CL:0000576!1.06e-22!63;CL:0000040!1.06e-22!63;CL:0000559!1.06e-22!63;CL:0000763!8.17e-17!112;CL:0000049!8.17e-17!112;CL:0000738!2.40e-13!140;CL:0002031!5.27e-11!124;CL:0002087!3.51e-09!119;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0000134!2.42e-07!358;CL:0002320!4.38e-07!365;CL:0000988!7.52e-07!182 | |ontology_enrichment_celltype=CL:0000766!1.72e-28!76;CL:0002057!1.73e-26!42;CL:0000839!5.50e-25!70;CL:0000557!1.05e-24!71;CL:0002009!7.09e-24!65;CL:0000860!8.41e-24!45;CL:0002194!1.06e-22!63;CL:0000576!1.06e-22!63;CL:0000040!1.06e-22!63;CL:0000559!1.06e-22!63;CL:0000763!8.17e-17!112;CL:0000049!8.17e-17!112;CL:0000738!2.40e-13!140;CL:0002031!5.27e-11!124;CL:0002087!3.51e-09!119;CL:0000037!1.81e-08!172;CL:0000566!1.81e-08!172;CL:0002032!3.84e-08!165;CL:0000837!3.84e-08!165;CL:0000134!2.42e-07!358;CL:0002320!4.38e-07!365;CL:0000988!7.52e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-23;33!CL:0002057;1.02e-23;33!CL:0000473;3.86e-20;39!CL:0000234;3.86e-20;39!CL:0000576;7.80e-20;48!CL:0000766;2.22e-16;69!CL:0000763;2.29e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-33,72;CL:0000473,3.31e-30,48;CL:0000234,3.31e-30,48;CL:0000860,4.08e-30,42;CL:0002057,4.08e-30,42;CL:0000557,1.67e-29,67;CL:0000839,1.86e-29,66;CL:0002009,3.13e-28,61;CL:0002194,7.31e-27,59;CL:0000576,7.31e-27,59;CL:0000040,7.31e-27,59;CL:0000559,7.31e-27,59;CL:0000763,1.75e-19,108;CL:0000049,1.75e-19,108;CL:0000738,5.62e-14,136;CL:0002031,2.12e-11,120;CL:0002087,3.16e-09,115;CL:0000037,8.41e-09,168;CL:0002032,2.92e-08,161;CL:0000837,2.92e-08,161;CL:0000988,1.08e-07,177;CL:0000134,2.49e-07,354;CL:0002320,4.57e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-22;42!CL:0000049;5.12e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.01e-21!102;UBERON:0003061!2.01e-21!102;UBERON:0002371!4.84e-21!80;UBERON:0002193!1.46e-19!112;UBERON:0004765!8.38e-18!101;UBERON:0001434!8.38e-18!101;UBERON:0001474!1.77e-17!86;UBERON:0002405!1.75e-15!115;UBERON:0002204!7.60e-09!167;UBERON:0002384!8.30e-07!375;UBERON:0000062!9.76e-07!511 | |ontology_enrichment_uberon=UBERON:0002390!2.01e-21!102;UBERON:0003061!2.01e-21!102;UBERON:0002371!4.84e-21!80;UBERON:0002193!1.46e-19!112;UBERON:0004765!8.38e-18!101;UBERON:0001434!8.38e-18!101;UBERON:0001474!1.77e-17!86;UBERON:0002405!1.75e-15!115;UBERON:0002204!7.60e-09!167;UBERON:0002384!8.30e-07!375;UBERON:0000062!9.76e-07!511 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-25,76;UBERON:0002390,3.17e-25,98;UBERON:0003061,3.17e-25,98;UBERON:0002193,2.45e-22,108;UBERON:0001474,1.89e-21,82;UBERON:0004765,9.94e-21,90;UBERON:0002405,3.86e-19,93;UBERON:0001434,8.14e-19,100;UBERON:0002204,8.52e-09,167 | |||
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| ||
|short_description=p4@ERBB2IP | |short_description=p4@ERBB2IP | ||
}} | }} |
Latest revision as of 10:41, 18 September 2015
Short description: | p4@ERBB2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ERBB2IP_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 34bp_to_ENST00000380938_5end |
EntrezGene: | ERBB2IP |
HGNC: | 15842 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.56e-33 | 72 |
defensive cell | 3.31e-30 | 48 |
phagocyte | 3.31e-30 | 48 |
classical monocyte | 4.08e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-30 | 42 |
granulocyte monocyte progenitor cell | 1.67e-29 | 67 |
myeloid lineage restricted progenitor cell | 1.86e-29 | 66 |
macrophage dendritic cell progenitor | 3.13e-28 | 61 |
monopoietic cell | 7.31e-27 | 59 |
monocyte | 7.31e-27 | 59 |
monoblast | 7.31e-27 | 59 |
promonocyte | 7.31e-27 | 59 |
myeloid cell | 1.75e-19 | 108 |
common myeloid progenitor | 1.75e-19 | 108 |
leukocyte | 5.62e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-11 | 120 |
nongranular leukocyte | 3.16e-09 | 115 |
hematopoietic stem cell | 8.41e-09 | 168 |
hematopoietic oligopotent progenitor cell | 2.92e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.92e-08 | 161 |
hematopoietic cell | 1.08e-07 | 177 |
mesenchymal cell | 2.49e-07 | 354 |
connective tissue cell | 4.57e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-25 | 76 |
hematopoietic system | 3.17e-25 | 98 |
blood island | 3.17e-25 | 98 |
hemolymphoid system | 2.45e-22 | 108 |
bone element | 1.89e-21 | 82 |
skeletal element | 9.94e-21 | 90 |
immune system | 3.86e-19 | 93 |
skeletal system | 8.14e-19 | 100 |
musculoskeletal system | 8.52e-09 | 167 |