FFCP PHASE1:Hg19::chr4:83770003..83770031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22872 | |EntrezGene=22872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17052 | |HGNC=17052 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000511338_5end | |association_with_transcript=-7bp_to_ENST00000511338_5end | ||
|cluster_id=chr4:83770003..83770031,- | |||
|description=CAGE_peak_4_at_SEC31A_5end | |description=CAGE_peak_4_at_SEC31A_5end | ||
|id=chr4:83770003..83770031,- | |id=chr4:83770003..83770031,- | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-08!180;CL:0000057!5.87e-07!75 | |ontology_enrichment_celltype=CL:0000055!1.55e-08!180;CL:0000057!5.87e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000723;6.68e-07;61!CL:0002334;7.78e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,6.83e-09,433;CL:0000057,6.94e-09,76;CL:0000048,2.17e-08,427;CL:0000034,3.39e-08,441;CL:0000680,6.28e-07,58;CL:0000056,6.28e-07,58;CL:0000355,6.28e-07,58;CL:0002334,6.71e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.37e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.37e-07;41!UBERON:0002199;7.58e-07;46!UBERON:0002416;7.58e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.87e-09,41;UBERON:0002199,8.43e-09,46;UBERON:0002416,8.43e-09,46;UBERON:0003102,1.51e-08,99;UBERON:0001134,5.59e-07,62;UBERON:0002036,5.59e-07,62;UBERON:0003082,5.59e-07,62 | |||
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| ||
|short_description=p4@SEC31A | |short_description=p4@SEC31A | ||
}} | }} |
Latest revision as of 01:17, 19 September 2015
Short description: | p4@SEC31A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC31A_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000511338_5end |
EntrezGene: | SEC31A |
HGNC: | 17052 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 6.83e-09 | 433 |
fibroblast | 6.94e-09 | 76 |
multi fate stem cell | 2.17e-08 | 427 |
stem cell | 3.39e-08 | 441 |
muscle precursor cell | 6.28e-07 | 58 |
myoblast | 6.28e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.28e-07 | 58 |
preadipocyte | 6.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.87e-09 | 41 |
integument | 8.43e-09 | 46 |
integumental system | 8.43e-09 | 46 |
surface structure | 1.51e-08 | 99 |
skeletal muscle tissue | 5.59e-07 | 62 |
striated muscle tissue | 5.59e-07 | 62 |
myotome | 5.59e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.37e-07 | 14 |