FFCP PHASE1:Hg19::chr4:183006221..183006245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505537_5end | |association_with_transcript=0bp_to_ENST00000505537_5end | ||
|cluster_id=chr4:183006221..183006245,- | |||
|coexpression_cluster_id=C3439 | |||
|description=CAGE_peak_1_at_ENST00000505537_5end | |description=CAGE_peak_1_at_ENST00000505537_5end | ||
|id=chr4:183006221..183006245,- | |id=chr4:183006221..183006245,- | ||
|ontology_enrichment_celltype=CL:0000055!1.17e-19!180;CL:0002319!3.21e-15!25;CL:0000243!1.88e-14!15;CL:0000125!1.88e-14!15;CL:0000030!1.88e-14!15;CL:0000339!1.88e-14!15;CL:0000128!8.59e-14!7;CL:0000126!8.59e-14!7;CL:0000127!8.59e-14!7;CL:0002453!8.59e-14!7;CL:0000133!1.24e-13!59;CL:0000095!1.32e-12!17;CL:0000123!1.32e-12!17;CL:0000221!2.61e-11!71;CL:0002322!1.19e-09!5;CL:0000057!1.25e-08!75;CL:0000064!7.15e-08!3;CL:0005012!7.15e-08!3;CL:0000067!7.15e-08!3;CL:0002304!7.15e-08!3;CL:0000144!7.90e-08!625;CL:0000333!9.14e-08!41;CL:0002603!3.06e-07!3;CL:0002334!4.99e-07!12;CL:0000075!5.70e-07!27;CL:0002371!6.62e-07!591;CL:0000548!6.92e-07!679;CL:0000004!6.92e-07!679;CL:0000255!6.92e-07!679;CL:0000012!9.52e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.17e-19!180;CL:0002319!3.21e-15!25;CL:0000243!1.88e-14!15;CL:0000125!1.88e-14!15;CL:0000030!1.88e-14!15;CL:0000339!1.88e-14!15;CL:0000128!8.59e-14!7;CL:0000126!8.59e-14!7;CL:0000127!8.59e-14!7;CL:0002453!8.59e-14!7;CL:0000133!1.24e-13!59;CL:0000095!1.32e-12!17;CL:0000123!1.32e-12!17;CL:0000221!2.61e-11!71;CL:0002322!1.19e-09!5;CL:0000057!1.25e-08!75;CL:0000064!7.15e-08!3;CL:0005012!7.15e-08!3;CL:0000067!7.15e-08!3;CL:0002304!7.15e-08!3;CL:0000144!7.90e-08!625;CL:0000333!9.14e-08!41;CL:0002603!3.06e-07!3;CL:0002334!4.99e-07!12;CL:0000075!5.70e-07!27;CL:0002371!6.62e-07!591;CL:0000548!6.92e-07!679;CL:0000004!6.92e-07!679;CL:0000255!6.92e-07!679;CL:0000012!9.52e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000128;5.14e-17;7!CL:0000126;5.14e-17;7!CL:0000127;5.14e-17;7!CL:0000064;1.09e-16;3!CL:0000067;1.09e-16;3!CL:0005012;1.09e-16;3!CL:0002304;1.09e-16;3!CL:0002319;4.44e-16;25!CL:0002603;4.71e-15;3!CL:0000243;5.73e-13;15!CL:0000125;5.73e-13;15!CL:0000306;2.79e-12;4!CL:0002222;2.79e-12;4!CL:0002224;2.79e-12;4!CL:0000095;1.65e-11;17!CL:0002549;8.02e-11;2!CL:0000075;1.81e-08;27!CL:0000540;5.30e-08;6!CL:0000404;5.30e-08;6!CL:0002577;3.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,5.14e-17,7;CL:0000126,5.14e-17,7;CL:0000127,5.14e-17,7;CL:0002453,5.14e-17,7;CL:0000064,1.06e-16,3;CL:0000067,1.06e-16,3;CL:0005012,1.06e-16,3;CL:0002304,1.06e-16,3;CL:0002319,4.12e-16,25;CL:0002603,3.43e-15,3;CL:0000243,6.01e-13,15;CL:0000125,6.01e-13,15;CL:0000030,6.01e-13,15;CL:0000339,6.01e-13,15;CL:0000133,8.67e-13,59;CL:0000306,2.79e-12,4;CL:0002222,2.79e-12,4;CL:0002224,2.79e-12,4;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002549,6.42e-11,2;CL:0000221,5.01e-10,72;CL:0000075,1.89e-08,27;CL:0000540,4.48e-08,6;CL:0000031,4.48e-08,6;CL:0000404,4.48e-08,6;CL:0000062,1.66e-07,11;CL:0000375,1.66e-07,11;CL:0000335,1.66e-07,11;CL:0002577,3.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;5.73e-13;15!CL:0000031;5.30e-08;6!CL:0000335;1.62e-07;11 | |||
|ontology_enrichment_disease=DOID:3093!2.59e-07!11 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!7.02e-10!4;UBERON:0007625!1.50e-09!11;UBERON:0002200!4.09e-09!11;UBERON:0006876!4.09e-09!11;UBERON:0001778!7.15e-08!3;UBERON:0001775!7.15e-08!3;UBERON:0001801!3.40e-07!14 | |ontology_enrichment_uberon=UBERON:0000488!7.02e-10!4;UBERON:0007625!1.50e-09!11;UBERON:0002200!4.09e-09!11;UBERON:0006876!4.09e-09!11;UBERON:0001778!7.15e-08!3;UBERON:0001775!7.15e-08!3;UBERON:0001801!3.40e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.61e-22;11!UBERON:0000488;1.71e-21;4!UBERON:0001801;1.73e-17;14!UBERON:0001778;1.09e-16;3!UBERON:0001775;1.09e-16;3!UBERON:0006876;2.15e-16;11!UBERON:0002203;2.28e-14;6!UBERON:0001768;2.28e-14;6!UBERON:0002200;2.28e-14;6!UBERON:0000019;1.26e-12;19!UBERON:0000047;1.26e-12;19!UBERON:0004088;1.26e-12;19!UBERON:0010230;1.26e-12;19!UBERON:0010077;2.79e-12;4!UBERON:0005389;2.79e-12;4!UBERON:0000484;2.79e-12;4!UBERON:0000965;2.79e-12;4!UBERON:0001803;2.79e-12;4!UBERON:0000970;6.05e-12;20!UBERON:0002104;2.50e-11;21!UBERON:0001456;2.50e-11;21!UBERON:0005629;8.02e-11;2!UBERON:0005358;8.02e-11;2!UBERON:0001886;8.02e-11;2!UBERON:0004086;8.02e-11;2!UBERON:0005282;8.02e-11;2!UBERON:0005281;8.02e-11;2!UBERON:0000020;2.95e-10;23!UBERON:0001032;8.68e-10;24!UBERON:0004456;8.68e-10;24!UBERON:0002037;9.08e-08;6!UBERON:0010371;3.06e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.56e-22,11;UBERON:0000488,1.63e-21,4;UBERON:0001801,1.69e-17,14;UBERON:0001778,1.06e-16,3;UBERON:0001775,1.06e-16,3;UBERON:0006876,1.86e-16,11;UBERON:0002203,2.21e-14,6;UBERON:0001768,2.21e-14,6;UBERON:0002200,2.21e-14,6;UBERON:0010077,2.79e-12,4;UBERON:0005389,2.79e-12,4;UBERON:0000484,2.79e-12,4;UBERON:0002546,2.79e-12,4;UBERON:0000965,2.79e-12,4;UBERON:0001803,2.79e-12,4;UBERON:0003073,2.79e-12,4;UBERON:0005426,2.79e-12,4;UBERON:0000019,5.96e-12,20;UBERON:0000047,5.96e-12,20;UBERON:0010312,5.96e-12,20;UBERON:0004088,5.96e-12,20;UBERON:0010230,5.96e-12,20;UBERON:0003072,5.96e-12,20;UBERON:0004128,5.96e-12,20;UBERON:0003071,5.96e-12,20;UBERON:0000970,2.46e-11,21;UBERON:0002104,2.46e-11,21;UBERON:0005629,6.42e-11,2;UBERON:0005358,6.42e-11,2;UBERON:0001886,6.42e-11,2;UBERON:0004086,6.42e-11,2;UBERON:0005282,6.42e-11,2;UBERON:0005281,6.42e-11,2;UBERON:0001456,8.96e-11,22;UBERON:0000020,8.57e-10,24;UBERON:0001032,8.57e-10,24;UBERON:0004456,8.57e-10,24;UBERON:0002037,7.79e-08,6;UBERON:0006215,7.79e-08,6;UBERON:0005085,2.33e-07,31 | |||
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|short_description=p1@ENST00000505537 | |short_description=p1@ENST00000505537 | ||
}} | }} |
Latest revision as of 03:43, 30 July 2015
Short description: | p1@ENST00000505537 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000505537_5end |
Coexpression cluster: | C3439_Ciliary_Lens_teratocarcinoma_liposarcoma_renal_Iris_clear |
Association with transcript: | 0bp_to_ENST00000505537_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 5.14e-17 | 7 |
macroglial cell | 5.14e-17 | 7 |
astrocyte | 5.14e-17 | 7 |
oligodendrocyte precursor cell | 5.14e-17 | 7 |
ciliated cell | 1.06e-16 | 3 |
ciliated epithelial cell | 1.06e-16 | 3 |
multi-ciliated epithelial cell | 1.06e-16 | 3 |
non-pigmented ciliary epithelial cell | 1.06e-16 | 3 |
neural cell | 4.12e-16 | 25 |
astrocyte of the cerebellum | 3.43e-15 | 3 |
glial cell (sensu Vertebrata) | 6.01e-13 | 15 |
glial cell | 6.01e-13 | 15 |
glioblast | 6.01e-13 | 15 |
glioblast (sensu Vertebrata) | 6.01e-13 | 15 |
neurectodermal cell | 8.67e-13 | 59 |
crystallin accumulating cell | 2.79e-12 | 4 |
vertebrate lens cell | 2.79e-12 | 4 |
lens epithelial cell | 2.79e-12 | 4 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
fibroblast of choroid plexus | 6.42e-11 | 2 |
ectodermal cell | 5.01e-10 | 72 |
columnar/cuboidal epithelial cell | 1.89e-08 | 27 |
neuron | 4.48e-08 | 6 |
neuroblast | 4.48e-08 | 6 |
electrically signaling cell | 4.48e-08 | 6 |
osteoblast | 1.66e-07 | 11 |
osteoprogenitor cell | 1.66e-07 | 11 |
mesenchyme condensation cell | 1.66e-07 | 11 |
placental epithelial cell | 3.45e-07 | 3 |