FFCP PHASE1:Hg19::chr15:39889167..39889181,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39889167..39889181,+
|short_description=p@chr15:39889167..39889181,+
|description=CAGE_peak_at_chr15:39889167..39889181,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39889167..39889181,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39889167..39889181,+ | |||
|id=chr15:39889167..39889181,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.92e-13!119;CL:0002139!4.44e-12!24;CL:0000115!6.94e-11!35;CL:0000055!1.68e-10!180;CL:0000220!2.55e-10!246;CL:0002321!3.68e-10!248;CL:0000071!1.98e-09!18;CL:0002546!1.98e-09!18;CL:0002078!2.59e-09!44;CL:0002371!9.72e-09!591;CL:0000548!1.13e-08!679;CL:0000004!1.13e-08!679;CL:0000255!1.13e-08!679;CL:0000012!3.06e-08!682;CL:0000057!1.03e-07!75;CL:0000144!5.94e-07!625;CL:0000213!7.72e-07!57;CL:0000215!7.72e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.76e-15;24!CL:0000071;5.64e-11;18!CL:0000115;5.57e-10;36!CL:1000413;6.59e-08;9!CL:0002544;6.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.57e-15,24;CL:0000115,6.55e-12,36;CL:0000222,2.20e-11,121;CL:0000071,2.88e-11,18;CL:0002546,2.88e-11,18;CL:0002078,1.64e-10,45;CL:0000213,3.82e-08,58;CL:0000215,3.82e-08,58;CL:1000413,5.08e-08,9;CL:0002544,6.29e-07,6;CL:0000359,6.43e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;5.64e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.40e-19!69;UBERON:0001981!1.56e-18!60;UBERON:0007500!1.56e-18!60;UBERON:0004537!1.56e-18!60;UBERON:0006965!1.56e-18!60;UBERON:0004872!1.11e-17!84;UBERON:0002049!8.49e-17!79;UBERON:0007798!8.49e-17!79;UBERON:0001009!4.56e-14!113;UBERON:0003914!5.67e-14!118;UBERON:0004535!2.09e-13!110;UBERON:0001637!6.20e-13!42;UBERON:0003509!6.20e-13!42;UBERON:0004572!6.20e-13!42;UBERON:0000490!5.35e-11!138;UBERON:0004573!5.79e-10!33;UBERON:0004571!5.79e-10!33;UBERON:0001986!1.98e-09!18;UBERON:0004638!1.98e-09!18;UBERON:0004852!1.98e-09!18;UBERON:0000468!2.31e-09!659;UBERON:0000487!2.76e-09!22;UBERON:0000467!3.82e-09!625;UBERON:0000480!5.34e-09!626;UBERON:0000926!3.90e-08!448;UBERON:0004120!3.90e-08!448;UBERON:0006603!3.90e-08!448;UBERON:0000947!3.92e-08!21;UBERON:0010191!3.92e-08!21;UBERON:0003081!7.03e-08!216;UBERON:0002100!1.22e-07!216;UBERON:0006914!3.53e-07!25;UBERON:0000486!3.73e-07!82;UBERON:0000914!4.99e-07!83;UBERON:0002329!4.99e-07!83;UBERON:0003077!4.99e-07!83;UBERON:0003059!4.99e-07!83;UBERON:0007282!4.99e-07!83;UBERON:0009618!4.99e-07!83;UBERON:0007285!4.99e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.78e-12;42!UBERON:0003509;3.78e-12;42!UBERON:0004572;3.78e-12;42!UBERON:0004638;5.64e-11;18!UBERON:0001986;5.64e-11;18!UBERON:0004852;5.64e-11;18!UBERON:0007500;6.65e-10;56!UBERON:0001981;6.65e-10;56!UBERON:0004537;6.65e-10;56!UBERON:0000487;1.23e-09;22!UBERON:0004573;1.59e-09;33!UBERON:0004571;1.59e-09;33!UBERON:0000055;1.63e-09;65!UBERON:0006914;4.96e-08;25!UBERON:0003915;6.59e-08;9!UBERON:0004700;6.59e-08;9!UBERON:0001917;6.59e-08;9!UBERON:0002049;8.42e-08;75!UBERON:0007798;8.42e-08;75!UBERON:0005631;1.19e-07;10!UBERON:0000158;1.19e-07;10!UBERON:0000947;3.15e-07;21!UBERON:0010191;3.15e-07;21!UBERON:0010260;9.25e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.52e-19,68;UBERON:0007500,1.49e-17,59;UBERON:0001981,1.49e-17,59;UBERON:0004537,1.49e-17,59;UBERON:0006965,1.49e-17,59;UBERON:0002049,1.54e-15,78;UBERON:0007798,1.54e-15,78;UBERON:0001637,3.12e-15,42;UBERON:0003509,3.12e-15,42;UBERON:0004572,3.12e-15,42;UBERON:0004872,5.38e-14,83;UBERON:0004638,2.88e-11,18;UBERON:0001986,2.88e-11,18;UBERON:0004852,2.88e-11,18;UBERON:0003914,3.28e-11,117;UBERON:0001009,5.00e-11,112;UBERON:0004535,7.36e-11,109;UBERON:0004573,1.59e-10,33;UBERON:0004571,1.59e-10,33;UBERON:0000487,6.08e-10,22;UBERON:0006914,2.73e-08,25;UBERON:0003081,4.75e-08,203;UBERON:0003915,5.08e-08,9;UBERON:0004700,5.08e-08,9;UBERON:0001917,5.08e-08,9;UBERON:0000947,2.49e-07,21;UBERON:0010191,2.49e-07,21;UBERON:0000490,3.80e-07,148;UBERON:0010260,7.11e-07,9 | |||
|phase1_expression=3.27021082687002,2.14100523890983,2.81908808191942,1.0007329835313,0.446961094427288,2.61701557230111,0,0,0,0.245733936501509,0,0.873765488520689,1.31883489114227,0.247532705920093,0,2.6893005858071,2.41077811209591,0.730310090387373,1.95173119516203,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0.369754010166788,0,0,0,0,2.20598892217156,0.217010870715852,0.223915474239924,0,0.257575567634187,0.581592955118259,0,0,2.09186133215116,0.411167888021826,0,4.02769349251011,1.0246428261164,0.236482229888585,3.10271112662957,0,0,1.50593871634084,0.272906150057846,0.674170453335254,1.53041946185451,0.962787081228281,0.639337125799041,1.31940520074686,0.199463657621632,0,3.19230162491442,0.56738522469114,0,3.01498398308092,0.521482918420201,0.217188844705117,1.81619850790011,0.368277635987565,0.949387162322653,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0.361439152384566,1.50401373190767,0.289693037921647,0,4.37971383272372,0.189069634328136,0.443458794925128,0,0,0.728590576585084,0,0,0,0,0.238490624305342,0,0,3.57772333260069,0.860234595106124,6.94281003215189,10.1755429546322,6.29249154314859,1.6507082516404,0.417989933073621,0.516833518338658,1.06729878806013,1.00416183829401,1.20848795132744,3.04108842287405,0.488124115096339,4.04429388380456,4.86085168729056,1.96459402224975,2.69435247151404,5.85579698513276,0,0.949265659568129,1.83201743930407,0,0,1.74437620857014,38.2668402805395,1.51956613997496,1.32409180813219,0.286836620748814,0.709336764396714,0.560677600142307,3.20246987189115,3.7000132262574,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.516628905878827,10.6920257155385,13.5996811103206,0,0,0,0,0.277064115484183,12.7303510055443,7.04921930337745,14.5730917139399,1.02088964844019,0.358779271377724,3.84403299873421,3.39091041855299,0.600182192168805,0.618315175430633,0.515281080091258,2.23340227597908,2.86919764810153,0.389748020644795,0.504867548488229,2.20919756741518,0.323292113637624,0.710019185033229,0.302256294682921,0.847802961552438,0.386521706326594,0.818238361772504,4.01526433544605,0.121973706129595,0,0.116193942869518,0,0,0,4.69348596989448,1.28648187638577,0,0.928735856063958,0.721879481669586,0,0,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0,0,0,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0,0.277765335475589,0,0,0,0,0,1.44366447761074,5.55582615091933,2.66355813128438,0,0,0,0,0,1.87467667973554,2.01578553838631,0.850650583454319,0.716468181622786,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0.797814349754612,1.04007436911366,0.514414748524284,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,0,1.42636905040718,0.723906533337896,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,7.69492187663986,10.1704523614382,7.88512075169673,10.5427273493442,2.40756879782175,2.27407504055985,1.03473071292505,1.32845119707087,0,0.60818530127658,0,0,0.206768026122887,0,0.320182673410333,0,0,0.30239029332968,3.47350930946288,11.3561860233166,4.77122160536225,1.66580894032411,2.55853624533352,5.79074116116987,0,0.462629081407967,0.532685175939381,0.246381468041427,0,0.232420756919918,0,1.00253235151642,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.850468526382578,2.80690690932781,4.62681758070868,0,0,0.764628819135115,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.991709492165869,4.80475168412765,2.16941611240793,0.708104465988849,0,0,4.1822236209636,0.308033580176089,1.06461206063404,0.869932992075073,2.03856641014312,0.715624433709956,0,0.632758849437452,0.190630193923825,0.511795582622668,0,0.318203247925937,0,1.2591072030832,0.274537029736055,0.117812402345686,1.61745985258653,3.17020642346017,1.26377536871694,0,0,3.16950440270266,0,0.282810863907425,0,0,5.97095077717098,1.31535265576129,0,0.655894752046633,3.24656603140326,2.16876448669825,1.12678241012897,0.286822704408103,0.491245205065606,2.85336841185,0,0,0,0,0.349934720244983,0.769776901804097,0.670302275535787,0,0.0941438007767792,0.86101074534246,3.36942951335251,1.7737206141467,2.29723400206959,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,6.73735898684351,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,5.96861211844225,2.37571744666111,10.4434638713739,0,0,0.445234820091624,0,0,0.398495976502139,0.276283915531148,0,0.511343412510774,0,3.42143546427988,3.95420745048238,0.358042349351218,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| ||
|short_description=p@chr15:39889167..39889181,+ | |||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889167..39889181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889167..39889181, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.57e-15 | 24 |
endothelial cell | 6.55e-12 | 36 |
mesodermal cell | 2.20e-11 | 121 |
blood vessel endothelial cell | 2.88e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-11 | 18 |
meso-epithelial cell | 1.64e-10 | 45 |
lining cell | 3.82e-08 | 58 |
barrier cell | 3.82e-08 | 58 |
endothelial cell of artery | 5.08e-08 | 9 |
aortic endothelial cell | 6.29e-07 | 6 |
vascular associated smooth muscle cell | 6.43e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.52e-19 | 68 |
epithelial tube open at both ends | 1.49e-17 | 59 |
blood vessel | 1.49e-17 | 59 |
blood vasculature | 1.49e-17 | 59 |
vascular cord | 1.49e-17 | 59 |
vasculature | 1.54e-15 | 78 |
vascular system | 1.54e-15 | 78 |
artery | 3.12e-15 | 42 |
arterial blood vessel | 3.12e-15 | 42 |
arterial system | 3.12e-15 | 42 |
splanchnic layer of lateral plate mesoderm | 5.38e-14 | 83 |
blood vessel endothelium | 2.88e-11 | 18 |
endothelium | 2.88e-11 | 18 |
cardiovascular system endothelium | 2.88e-11 | 18 |
epithelial tube | 3.28e-11 | 117 |
circulatory system | 5.00e-11 | 112 |
cardiovascular system | 7.36e-11 | 109 |
systemic artery | 1.59e-10 | 33 |
systemic arterial system | 1.59e-10 | 33 |
simple squamous epithelium | 6.08e-10 | 22 |
squamous epithelium | 2.73e-08 | 25 |
lateral plate mesoderm | 4.75e-08 | 203 |
endothelial tube | 5.08e-08 | 9 |
arterial system endothelium | 5.08e-08 | 9 |
endothelium of artery | 5.08e-08 | 9 |
aorta | 2.49e-07 | 21 |
aortic system | 2.49e-07 | 21 |
unilaminar epithelium | 3.80e-07 | 148 |
umbilical blood vessel | 7.11e-07 | 9 |