FFCP PHASE1:Hg19::chr4:122740685..122740697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:122740685..122740697,- | |||
|description=CAGE_peak_at_chr4:122740685..122740697,- | |description=CAGE_peak_at_chr4:122740685..122740697,- | ||
|id=chr4:122740685..122740697,- | |id=chr4:122740685..122740697,- | ||
|ontology_enrichment_celltype=CL:0000064!9.60e-08!3;CL:0005012!9.60e-08!3;CL:0000067!9.60e-08!3;CL:0002304!9.60e-08!3 | |ontology_enrichment_celltype=CL:0000064!9.60e-08!3;CL:0005012!9.60e-08!3;CL:0000067!9.60e-08!3;CL:0002304!9.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002581;3.28e-23;1!CL:0002586;8.96e-09;3!CL:0000064;1.21e-08;3!CL:0000067;1.21e-08;3!CL:0005012;1.21e-08;3!CL:0002605;1.21e-08;3!CL:0002304;1.21e-08;3!CL:0000149;6.87e-07;4!CL:0000306;8.61e-07;4!CL:0002222;8.61e-07;4!CL:0002224;8.61e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.62e-23,1;CL:0002586,8.96e-09,3;CL:0000064,9.66e-09,3;CL:0000067,9.66e-09,3;CL:0005012,9.66e-09,3;CL:0002304,9.66e-09,3;CL:0002605,1.51e-08,3;CL:0000149,6.87e-07,4;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.80e-09;11!UBERON:0009497;8.59e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!1.01e-09!4;UBERON:0007625!2.47e-09!11;UBERON:0001778!9.60e-08!3;UBERON:0001775!9.60e-08!3 | |ontology_enrichment_uberon=UBERON:0000488!1.01e-09!4;UBERON:0007625!2.47e-09!11;UBERON:0001778!9.60e-08!3;UBERON:0001775!9.60e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.06e-23;1!UBERON:0009842;1.06e-23;1!UBERON:0003704;1.06e-23;1!UBERON:0001171;1.06e-23;1!UBERON:0001172;1.06e-23;1!UBERON:0007625;1.04e-18;11!UBERON:0005406;2.59e-12;2!UBERON:0000019;3.93e-11;19!UBERON:0000047;3.93e-11;19!UBERON:0004088;3.93e-11;19!UBERON:0010230;3.93e-11;19!UBERON:0000970;1.31e-10;20!UBERON:0002104;3.92e-10;21!UBERON:0001456;3.92e-10;21!UBERON:0000020;2.63e-09;23!UBERON:0001032;6.05e-09;24!UBERON:0004456;6.05e-09;24!UBERON:0001280;8.31e-09;3!UBERON:0004647;8.31e-09;3!UBERON:0001781;8.96e-09;3!UBERON:0001782;8.96e-09;3!UBERON:0001778;1.21e-08;3!UBERON:0001775;1.21e-08;3!UBERON:0010371;2.84e-07;31!UBERON:0001801;3.14e-07;14!UBERON:0002394;6.50e-07;4!UBERON:0003928;6.50e-07;4!UBERON:0010077;8.61e-07;4!UBERON:0005389;8.61e-07;4!UBERON:0000488;8.61e-07;4!UBERON:0000484;8.61e-07;4!UBERON:0000965;8.61e-07;4!UBERON:0001803;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.07e-23,1;UBERON:0009842,1.07e-23,1;UBERON:0003704,1.07e-23,1;UBERON:0001171,1.07e-23,1;UBERON:0001172,1.07e-23,1;UBERON:0007625,9.78e-19,11;UBERON:0005406,2.32e-12,2;UBERON:0000019,1.27e-10,20;UBERON:0000047,1.27e-10,20;UBERON:0010312,1.27e-10,20;UBERON:0004088,1.27e-10,20;UBERON:0010230,1.27e-10,20;UBERON:0003072,1.27e-10,20;UBERON:0004128,1.27e-10,20;UBERON:0003071,1.27e-10,20;UBERON:0000970,3.80e-10,21;UBERON:0002104,3.80e-10,21;UBERON:0001456,1.03e-09,22;UBERON:0000020,5.89e-09,24;UBERON:0001032,5.89e-09,24;UBERON:0004456,5.89e-09,24;UBERON:0001280,8.31e-09,3;UBERON:0004647,8.31e-09,3;UBERON:0005171,8.31e-09,3;UBERON:0001782,8.96e-09,3;UBERON:0005424,8.96e-09,3;UBERON:0001778,9.66e-09,3;UBERON:0001775,9.66e-09,3;UBERON:0001801,3.04e-07,14;UBERON:0005085,4.58e-07,31;UBERON:0001781,6.87e-07,4;UBERON:0000488,7.27e-07,4;UBERON:0010077,9.63e-07,4;UBERON:0005389,9.63e-07,4;UBERON:0000484,9.63e-07,4;UBERON:0002546,9.63e-07,4;UBERON:0000965,9.63e-07,4;UBERON:0001803,9.63e-07,4;UBERON:0003073,9.63e-07,4;UBERON:0005426,9.63e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,1.00434111675842,0.152826811495903,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,1.5905718941022,0.486634870302636,1.70162670895322,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0,0,0.487185025805993,0.252433774244115,0,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,1.15930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60302715731442,0,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32979812218605,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0.275078873194468,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0.690860683462397,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:122740685..122740697,- | |short_description=p@chr4:122740685..122740697,- | ||
}} | }} |
Latest revision as of 01:23, 30 July 2015
Short description: | p@chr4:122740685..122740697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:122740685..122740697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.62e-23 | 1 |
retinal pigment epithelial cell | 8.96e-09 | 3 |
ciliated cell | 9.66e-09 | 3 |
ciliated epithelial cell | 9.66e-09 | 3 |
multi-ciliated epithelial cell | 9.66e-09 | 3 |
non-pigmented ciliary epithelial cell | 9.66e-09 | 3 |
astrocyte of the cerebral cortex | 1.51e-08 | 3 |
visual pigment cell | 6.87e-07 | 4 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |