FFCP PHASE1:Hg19::chr4:101439215..101439228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC0,B4E347,Q4W5J1 | |UniProt=Q9ULC0,B4E347,Q4W5J1 | ||
|association_with_transcript=21bp_to_ENST00000296420,NM_001159694,NM_016242,uc003hvr.2,uc011cel.1,uc011cem.1_5end | |association_with_transcript=21bp_to_ENST00000296420,NM_001159694,NM_016242,uc003hvr.2,uc011cel.1,uc011cem.1_5end | ||
|cluster_id=chr4:101439215..101439228,- | |||
|description=CAGE_peak_6_at_EMCN_5end | |description=CAGE_peak_6_at_EMCN_5end | ||
|id=chr4:101439215..101439228,- | |id=chr4:101439215..101439228,- | ||
|ontology_enrichment_celltype=CL:0002139!1.91e-26!24;CL:0000115!4.65e-19!35;CL:0000071!1.84e-18!18;CL:0002546!1.84e-18!18;CL:0002078!2.07e-13!44;CL:0005020!1.05e-09!6;CL:0002138!1.05e-09!6;CL:0005022!1.05e-09!6;CL:1000413!1.20e-09!9;CL:0002543!2.16e-09!6;CL:0000213!1.41e-08!57;CL:0000215!1.41e-08!57 | |ontology_enrichment_celltype=CL:0002139!1.91e-26!24;CL:0000115!4.65e-19!35;CL:0000071!1.84e-18!18;CL:0002546!1.84e-18!18;CL:0002078!2.07e-13!44;CL:0005020!1.05e-09!6;CL:0002138!1.05e-09!6;CL:0005022!1.05e-09!6;CL:1000413!1.20e-09!9;CL:0002543!2.16e-09!6;CL:0000213!1.41e-08!57;CL:0000215!1.41e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.09e-54;24!CL:0000071;2.28e-33;18!CL:0000115;5.02e-31;36!CL:0002138;1.83e-23;6!CL:0002078;4.60e-20;45!CL:0002543;1.17e-16;6!CL:0002544;1.03e-15;6!CL:0000213;2.10e-15;58!CL:0000215;2.10e-15;58!CL:1000413;1.80e-14;9!CL:0002618;4.42e-13;3!CL:0002549;2.08e-08;2!CL:0002617;5.83e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.98e-54,24;CL:0000115,3.03e-38,36;CL:0000071,2.89e-33,18;CL:0002546,2.89e-33,18;CL:0002078,1.53e-29,45;CL:0005020,1.84e-23,6;CL:0002138,1.84e-23,6;CL:0005022,1.84e-23,6;CL:0000213,9.35e-22,58;CL:0000215,9.35e-22,58;CL:0002543,1.21e-16,6;CL:0002544,1.12e-15,6;CL:1000413,2.52e-14,9;CL:0002618,4.35e-13,3;CL:0000222,4.34e-11,121;CL:0002549,2.09e-08,2;CL:0002617,6.75e-08,2;CL:0000076,2.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.28e-33;18!CL:0005022;1.83e-23;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-28!115;UBERON:0001986!1.84e-18!18;UBERON:0004638!1.84e-18!18;UBERON:0004852!1.84e-18!18;UBERON:0000477!1.71e-16!286;UBERON:0002616!7.14e-15!59;UBERON:0004111!9.73e-15!241;UBERON:0001049!3.42e-14!57;UBERON:0005068!3.42e-14!57;UBERON:0006241!3.42e-14!57;UBERON:0007135!3.42e-14!57;UBERON:0000487!4.46e-14!22;UBERON:0002049!7.64e-14!79;UBERON:0007798!7.64e-14!79;UBERON:0000025!1.67e-13!194;UBERON:0001017!2.09e-12!82;UBERON:0005743!2.88e-12!86;UBERON:0000055!3.69e-12!69;UBERON:0000955!7.95e-12!69;UBERON:0006238!7.95e-12!69;UBERON:0006914!9.74e-12!25;UBERON:0000073!1.23e-11!94;UBERON:0001016!1.23e-11!94;UBERON:0003075!2.10e-11!86;UBERON:0007284!2.10e-11!86;UBERON:0000119!2.32e-11!312;UBERON:0000483!1.15e-10!309;UBERON:0002346!2.04e-10!90;UBERON:0002780!3.23e-10!41;UBERON:0001890!3.23e-10!41;UBERON:0006240!3.23e-10!41;UBERON:0001009!4.56e-10!113;UBERON:0004535!6.24e-10!110;UBERON:0003080!8.01e-10!42;UBERON:0003915!1.20e-09!9;UBERON:0004700!1.20e-09!9;UBERON:0001917!1.20e-09!9;UBERON:0001981!1.46e-08!60;UBERON:0007500!1.46e-08!60;UBERON:0004537!1.46e-08!60;UBERON:0006965!1.46e-08!60;UBERON:0002020!4.75e-08!34;UBERON:0003528!4.75e-08!34;UBERON:0001893!9.11e-08!34;UBERON:0001638!1.09e-07!9;UBERON:0003920!1.09e-07!9;UBERON:0004582!1.09e-07!9;UBERON:0000468!1.56e-07!659;UBERON:0004872!1.80e-07!84;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0002791!2.81e-07!33;UBERON:0001473!6.28e-07!8;UBERON:0004536!6.28e-07!8;UBERON:0006558!6.28e-07!8;UBERON:0002465!7.47e-07!10 | |ontology_enrichment_uberon=UBERON:0007023!4.62e-28!115;UBERON:0001986!1.84e-18!18;UBERON:0004638!1.84e-18!18;UBERON:0004852!1.84e-18!18;UBERON:0000477!1.71e-16!286;UBERON:0002616!7.14e-15!59;UBERON:0004111!9.73e-15!241;UBERON:0001049!3.42e-14!57;UBERON:0005068!3.42e-14!57;UBERON:0006241!3.42e-14!57;UBERON:0007135!3.42e-14!57;UBERON:0000487!4.46e-14!22;UBERON:0002049!7.64e-14!79;UBERON:0007798!7.64e-14!79;UBERON:0000025!1.67e-13!194;UBERON:0001017!2.09e-12!82;UBERON:0005743!2.88e-12!86;UBERON:0000055!3.69e-12!69;UBERON:0000955!7.95e-12!69;UBERON:0006238!7.95e-12!69;UBERON:0006914!9.74e-12!25;UBERON:0000073!1.23e-11!94;UBERON:0001016!1.23e-11!94;UBERON:0003075!2.10e-11!86;UBERON:0007284!2.10e-11!86;UBERON:0000119!2.32e-11!312;UBERON:0000483!1.15e-10!309;UBERON:0002346!2.04e-10!90;UBERON:0002780!3.23e-10!41;UBERON:0001890!3.23e-10!41;UBERON:0006240!3.23e-10!41;UBERON:0001009!4.56e-10!113;UBERON:0004535!6.24e-10!110;UBERON:0003080!8.01e-10!42;UBERON:0003915!1.20e-09!9;UBERON:0004700!1.20e-09!9;UBERON:0001917!1.20e-09!9;UBERON:0001981!1.46e-08!60;UBERON:0007500!1.46e-08!60;UBERON:0004537!1.46e-08!60;UBERON:0006965!1.46e-08!60;UBERON:0002020!4.75e-08!34;UBERON:0003528!4.75e-08!34;UBERON:0001893!9.11e-08!34;UBERON:0001638!1.09e-07!9;UBERON:0003920!1.09e-07!9;UBERON:0004582!1.09e-07!9;UBERON:0000468!1.56e-07!659;UBERON:0004872!1.80e-07!84;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0002791!2.81e-07!33;UBERON:0001473!6.28e-07!8;UBERON:0004536!6.28e-07!8;UBERON:0006558!6.28e-07!8;UBERON:0002465!7.47e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.28e-33;18!UBERON:0001986;2.28e-33;18!UBERON:0004852;2.28e-33;18!UBERON:0000487;9.80e-27;22!UBERON:0006914;3.73e-23;25!UBERON:0001473;2.01e-17;8!UBERON:0004536;2.01e-17;8!UBERON:0006558;2.01e-17;8!UBERON:0000490;1.86e-15;33!UBERON:0003915;1.80e-14;9!UBERON:0004700;1.80e-14;9!UBERON:0001917;1.80e-14;9!UBERON:0002465;8.55e-14;10!UBERON:0000055;1.85e-12;65!UBERON:0001638;5.54e-11;9!UBERON:0003920;5.54e-11;9!UBERON:0004582;5.54e-11;9!UBERON:0002049;5.49e-10;75!UBERON:0007798;5.49e-10;75!UBERON:0005629;2.08e-08;2!UBERON:0005358;2.08e-08;2!UBERON:0001886;2.08e-08;2!UBERON:0004086;2.08e-08;2!UBERON:0005282;2.08e-08;2!UBERON:0005281;2.08e-08;2!UBERON:0002066;5.41e-08;5!UBERON:0004535;2.00e-07;109!UBERON:0007500;2.22e-07;56!UBERON:0001981;2.22e-07;56!UBERON:0004537;2.22e-07;56!UBERON:0005284;2.85e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.89e-33,18;UBERON:0001986,2.89e-33,18;UBERON:0004852,2.89e-33,18;UBERON:0000487,1.19e-26,22;UBERON:0006914,4.40e-23,25;UBERON:0002049,3.34e-22,78;UBERON:0007798,3.34e-22,78;UBERON:0000055,1.15e-19,68;UBERON:0001473,2.02e-17,8;UBERON:0004536,2.02e-17,8;UBERON:0006558,2.02e-17,8;UBERON:0004535,1.50e-15,109;UBERON:0001009,5.75e-15,112;UBERON:0003915,2.52e-14,9;UBERON:0004700,2.52e-14,9;UBERON:0001917,2.52e-14,9;UBERON:0002465,8.58e-14,10;UBERON:0007500,5.60e-11,59;UBERON:0001981,5.60e-11,59;UBERON:0004537,5.60e-11,59;UBERON:0006965,5.60e-11,59;UBERON:0001638,5.67e-11,9;UBERON:0003920,5.67e-11,9;UBERON:0004582,5.67e-11,9;UBERON:0005629,2.09e-08,2;UBERON:0005358,2.09e-08,2;UBERON:0001886,2.09e-08,2;UBERON:0004086,2.09e-08,2;UBERON:0005282,2.09e-08,2;UBERON:0005281,2.09e-08,2;UBERON:0002066,5.36e-08,5;UBERON:0004872,6.93e-08,83;UBERON:0005284,3.12e-07,5;UBERON:0004111,6.99e-07,240 | |||
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|short_description=p6@EMCN | |short_description=p6@EMCN | ||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p6@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EMCN_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000296420, NM_001159694, NM_016242, uc003hvr.2, uc011cel.1, uc011cem.1_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | Q9ULC0B4E347Q4W5J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.98e-54 | 24 |
endothelial cell | 3.03e-38 | 36 |
blood vessel endothelial cell | 2.89e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.89e-33 | 18 |
meso-epithelial cell | 1.53e-29 | 45 |
lymphangioblast | 1.84e-23 | 6 |
endothelial cell of lymphatic vessel | 1.84e-23 | 6 |
vascular lymphangioblast | 1.84e-23 | 6 |
lining cell | 9.35e-22 | 58 |
barrier cell | 9.35e-22 | 58 |
vein endothelial cell | 1.21e-16 | 6 |
aortic endothelial cell | 1.12e-15 | 6 |
endothelial cell of artery | 2.52e-14 | 9 |
endothelial cell of umbilical vein | 4.35e-13 | 3 |
mesodermal cell | 4.34e-11 | 121 |
fibroblast of choroid plexus | 2.09e-08 | 2 |
adipocyte of breast | 6.75e-08 | 2 |
squamous epithelial cell | 2.14e-07 | 63 |