FFCP PHASE1:Hg19::chr3:58196639..58196653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1776 | |EntrezGene=1776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |HGNC=2959 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463694_5end | |association_with_transcript=0bp_to_ENST00000463694_5end | ||
|cluster_id=chr3:58196639..58196653,- | |||
|coexpression_cluster_id=C1157 | |||
|description=CAGE_peak_2_at_DNASE1L3_5end | |description=CAGE_peak_2_at_DNASE1L3_5end | ||
|id=chr3:58196639..58196653,- | |id=chr3:58196639..58196653,- | ||
|ontology_enrichment_celltype=CL:0000136!1.49e-13!15;CL:0002334!1.86e-13!12 | |ontology_enrichment_celltype=CL:0000136!1.49e-13!15;CL:0002334!1.86e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.37e-14;13!CL:0002334;6.39e-11;12!CL:0002615;2.03e-10;3!CL:0000840;1.44e-08;5!CL:0002617;1.15e-07;2!CL:0002262;3.22e-07;2!CL:1000398;3.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.97e-12,15;CL:0002334,1.30e-10,12;CL:0002615,2.05e-10,3;CL:0000840,1.36e-08,5;CL:0001029,1.36e-08,5;CL:0002617,1.19e-07,2;CL:0002262,3.23e-07,2;CL:1000398,3.23e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.55e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-26!115;UBERON:0004457!5.41e-08!12;UBERON:0000042!5.41e-08!12;UBERON:0003688!5.65e-07!6;UBERON:0002358!5.65e-07!6;UBERON:0003684!5.65e-07!6;UBERON:0001178!5.65e-07!6;UBERON:0002368!5.90e-07!35;UBERON:0003296!6.57e-07!4;UBERON:0010133!6.57e-07!4;UBERON:0005057!9.89e-07!26 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-26!115;UBERON:0004457!5.41e-08!12;UBERON:0000042!5.41e-08!12;UBERON:0003688!5.65e-07!6;UBERON:0002358!5.65e-07!6;UBERON:0003684!5.65e-07!6;UBERON:0001178!5.65e-07!6;UBERON:0002368!5.90e-07!35;UBERON:0003296!6.57e-07!4;UBERON:0010133!6.57e-07!4;UBERON:0005057!9.89e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.08e-10;3!UBERON:0003688;1.46e-08;6!UBERON:0002358;1.46e-08;6!UBERON:0003684;1.46e-08;6!UBERON:0001178;1.46e-08;6!UBERON:0002368;4.81e-08;33!UBERON:0003296;1.59e-07;4!UBERON:0010133;1.59e-07;4!UBERON:0000007;1.84e-07;2!UBERON:0001281;3.22e-07;2!UBERON:0003497;3.22e-07;2!UBERON:0003909;3.22e-07;2!UBERON:0003835;3.22e-07;2!UBERON:0002360;4.24e-07;2!UBERON:0000094;4.24e-07;2!UBERON:0010743;4.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.42e-13,114;UBERON:0004457,1.10e-11,12;UBERON:0000042,1.10e-11,12;UBERON:0002106,6.37e-10,3;UBERON:0004854,6.37e-10,3;UBERON:0009034,6.37e-10,3;UBERON:0002095,6.37e-10,3;UBERON:0004782,6.37e-10,3;UBERON:0003281,6.37e-10,3;UBERON:0009664,6.37e-10,3;UBERON:0002296,6.37e-10,3;UBERON:0005602,6.37e-10,3;UBERON:0001179,6.37e-10,3;UBERON:0006293,6.37e-10,3;UBERON:0002417,2.05e-09,60;UBERON:0000916,2.05e-09,60;UBERON:0003688,2.05e-08,6;UBERON:0002358,2.05e-08,6;UBERON:0003684,2.05e-08,6;UBERON:0001178,2.05e-08,6;UBERON:0002368,2.18e-08,35;UBERON:0009569,1.01e-07,112;UBERON:0000007,1.97e-07,2;UBERON:0003296,2.18e-07,4;UBERON:0010133,2.18e-07,4;UBERON:0001281,3.23e-07,2;UBERON:0003497,3.23e-07,2;UBERON:0003909,3.23e-07,2;UBERON:0003835,3.23e-07,2;UBERON:0002360,3.89e-07,2;UBERON:0000094,3.89e-07,2;UBERON:0010743,3.89e-07,2 | |||
|phase1_expression=27.2517568905835,5.35251309727458,4.36958652697511,9.00659685178174,4.46961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.37528029272598,0,0,2.59637914923747,3.83085422058388,2.92507513141503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.9128309197029,1.40241773803446,0,0,3.80265104465493,0,22.4500164538934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,1.12264037773229,0.384417447767103,1.02341449813341,0,2.96836132889982,1.54209693802656,1.06537035187876,1.14978018419333,0.519254429183621,3.60252173225874,0,0,0,0,0,0,0,0,0,0,0,0,1.87103075804167,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,16.3835208519878,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6864329211775,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,1.16641845353302,0,0,0,0,0.110579259931225,0,1.53569778007781,0,0,1.92375646259493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,8.4038150905889,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,1.06687918137261,0,2.93774963014692,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0.199679000498991,0,1.33902874465124,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,5.62434728878751,0,0,0,6.69848512043184,3.67182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5000886599863,10.6005511129777,0,0,0,0,4.37828391527548,0.157204305099666,0.828478110694391,1.9846640872478,0,0,0,1.63205341010842,1.0027595760908,1.22538230705385,0.983617892129413,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0.932623203496683,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.8657154983653,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,2.48105589194647,0,0,1.07140367175657,0.336283722218824,7.28358725083958,3.41493287026946,0.887023701626388,0.230467975111559,0,0,0,0,0,0.941917114206168,0,0,1.82631744101899,0,0,6.86174824095901,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,1.77500563648273,1.74847648403166,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.8453114551668,0,5.54505116081136,1.80482086326016,2.79835236589801,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.06090177505535,1.60778478093707,0,0,1.49263787330687,0.476128862927481,0.775066918032073,0.558672428662721,0,1.84576759006678,1.21270313374932,6.53150243690884,0,1.75115337837928,0.860666464712116,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,1.61019034872821,0 | |phase1_expression=27.2517568905835,5.35251309727458,4.36958652697511,9.00659685178174,4.46961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.37528029272598,0,0,2.59637914923747,3.83085422058388,2.92507513141503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.9128309197029,1.40241773803446,0,0,3.80265104465493,0,22.4500164538934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,1.12264037773229,0.384417447767103,1.02341449813341,0,2.96836132889982,1.54209693802656,1.06537035187876,1.14978018419333,0.519254429183621,3.60252173225874,0,0,0,0,0,0,0,0,0,0,0,0,1.87103075804167,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,16.3835208519878,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6864329211775,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,1.38100767891707,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,1.16641845353302,0,0,0,0,0.110579259931225,0,1.53569778007781,0,0,1.92375646259493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,8.4038150905889,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,1.06687918137261,0,2.93774963014692,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0.199679000498991,0,1.33902874465124,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,5.62434728878751,0,0,0,6.69848512043184,3.67182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5000886599863,10.6005511129777,0,0,0,0,4.37828391527548,0.157204305099666,0.828478110694391,1.9846640872478,0,0,0,1.63205341010842,1.0027595760908,1.22538230705385,0.983617892129413,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0.932623203496683,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.8657154983653,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,2.48105589194647,0,0,1.07140367175657,0.336283722218824,7.28358725083958,3.41493287026946,0.887023701626388,0.230467975111559,0,0,0,0,0,0.941917114206168,0,0,1.82631744101899,0,0,6.86174824095901,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,1.77500563648273,1.74847648403166,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.8453114551668,0,5.54505116081136,1.80482086326016,2.79835236589801,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.06090177505535,1.60778478093707,0,0,1.49263787330687,0.476128862927481,0.775066918032073,0.558672428662721,0,1.84576759006678,1.21270313374932,6.53150243690884,0,1.75115337837928,0.860666464712116,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,1.61019034872821,0 | ||
|short_description=p2@DNASE1L3 | |short_description=p2@DNASE1L3 | ||
}} | }} |
Latest revision as of 05:09, 19 September 2015
Short description: | p2@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNASE1L3_5end |
Coexpression cluster: | C1157_Hepatic_neuroectodermal_liver_Hepatocyte_Adipocyte_spleen_kidney |
Association with transcript: | 0bp_to_ENST00000463694_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.97e-12 | 15 |
preadipocyte | 1.30e-10 | 12 |
adipocyte of omentum tissue | 2.05e-10 | 3 |
immature conventional dendritic cell | 1.36e-08 | 5 |
common dendritic progenitor | 1.36e-08 | 5 |
adipocyte of breast | 1.19e-07 | 2 |
endothelial cell of sinusoid | 3.23e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.23e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.42e-13 | 114 |
cavity lining | 1.10e-11 | 12 |
serous membrane | 1.10e-11 | 12 |
spleen | 6.37e-10 | 3 |
gastrointestinal system mesentery | 6.37e-10 | 3 |
stomach region | 6.37e-10 | 3 |
mesentery | 6.37e-10 | 3 |
gastrointestinal system serosa | 6.37e-10 | 3 |
mesentery of stomach | 6.37e-10 | 3 |
gut mesentery | 6.37e-10 | 3 |
dorsal mesentery | 6.37e-10 | 3 |
dorsal mesogastrium | 6.37e-10 | 3 |
peritoneal cavity | 6.37e-10 | 3 |
spleen primordium | 6.37e-10 | 3 |
abdominal segment of trunk | 2.05e-09 | 60 |
abdomen | 2.05e-09 | 60 |
omentum | 2.05e-08 | 6 |
peritoneum | 2.05e-08 | 6 |
abdominal cavity | 2.05e-08 | 6 |
visceral peritoneum | 2.05e-08 | 6 |
endocrine gland | 2.18e-08 | 35 |
subdivision of trunk | 1.01e-07 | 112 |
pituitary gland | 1.97e-07 | 2 |
gland of diencephalon | 2.18e-07 | 4 |
neuroendocrine gland | 2.18e-07 | 4 |
hepatic sinusoid | 3.23e-07 | 2 |
abdomen blood vessel | 3.23e-07 | 2 |
sinusoid | 3.23e-07 | 2 |
abdominal segment blood vessel | 3.23e-07 | 2 |
meninx | 3.89e-07 | 2 |
membrane organ | 3.89e-07 | 2 |
meningeal cluster | 3.89e-07 | 2 |