FFCP PHASE1:Hg19::chr14:95080960..95080975,+: Difference between revisions
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|id=chr14:95080960..95080975,+
|short_description=p4@SERPINA3
|description=CAGE_peak_4_at_SERPINA3_5end
|association_with_transcript=118bp_to_J05176_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=118bp_to_J05176_5end | |||
|cluster_id=chr14:95080960..95080975,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SERPINA3_5end | |||
|id=chr14:95080960..95080975,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.16e-10;3!UBERON:0003057;2.16e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-34!115;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002346!2.45e-13!90;UBERON:0001049!1.71e-12!57;UBERON:0005068!1.71e-12!57;UBERON:0006241!1.71e-12!57;UBERON:0007135!1.71e-12!57;UBERON:0002616!1.03e-11!59;UBERON:0005743!2.08e-11!86;UBERON:0001017!9.92e-10!82;UBERON:0000073!1.53e-09!94;UBERON:0001016!1.53e-09!94;UBERON:0000955!7.98e-09!69;UBERON:0006238!7.98e-09!69;UBERON:0003056!2.39e-08!61;UBERON:0002298!5.13e-08!8;UBERON:0003080!9.31e-08!42;UBERON:0000477!2.39e-07!286;UBERON:0000475!3.97e-07!365;UBERON:0000025!4.92e-07!194;UBERON:0002020!6.45e-07!34;UBERON:0003528!6.45e-07!34;UBERON:0002780!6.47e-07!41;UBERON:0001890!6.47e-07!41;UBERON:0006240!6.47e-07!41;UBERON:0004111!9.13e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.98e-11;6!UBERON:0001896;2.16e-10;3!UBERON:0002240;2.16e-10;3!UBERON:0005174;2.16e-10;3!UBERON:0005290;2.16e-10;3!UBERON:0001137;2.16e-10;3!UBERON:0002107;9.25e-10;19!UBERON:0006925;9.25e-10;19!UBERON:0000029;2.74e-08;1!UBERON:0002134;2.74e-08;1!UBERON:0005208;2.74e-08;1!UBERON:0004145;2.74e-08;1!UBERON:0005946;2.74e-08;1!UBERON:0005965;2.74e-08;1!UBERON:0002078;2.74e-08;1!UBERON:0002423;2.35e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.59e-11,15;UBERON:0003057,1.59e-11,15;UBERON:0002298,5.36e-11,6;UBERON:0002240,2.06e-10,3;UBERON:0005174,2.06e-10,3;UBERON:0001137,2.06e-10,3;UBERON:0001896,2.49e-10,3;UBERON:0005290,2.49e-10,3;UBERON:0010096,2.49e-10,3;UBERON:0002107,9.26e-10,19;UBERON:0006925,9.26e-10,19;UBERON:0008836,9.26e-10,19;UBERON:0007023,1.58e-09,114;UBERON:0008835,2.15e-08,22;UBERON:0003894,2.15e-08,22;UBERON:0000029,2.29e-08,1;UBERON:0002134,2.64e-08,1;UBERON:0005208,2.64e-08,1;UBERON:0005946,2.64e-08,1;UBERON:0005965,2.64e-08,1;UBERON:0002078,2.64e-08,1;UBERON:0009854,5.10e-08,23;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0000949,2.97e-07,45;UBERON:0009856,4.61e-07,26 | |||
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| ||
|short_description=p4@SERPINA3 | |||
}} | }} |
Latest revision as of 18:47, 16 September 2015
Short description: | p4@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 118bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.59e-11 | 15 |
chordal neural plate | 1.59e-11 | 15 |
brainstem | 5.36e-11 | 6 |
spinal cord | 2.06e-10 | 3 |
dorsal region element | 2.06e-10 | 3 |
dorsum | 2.06e-10 | 3 |
medulla oblongata | 2.49e-10 | 3 |
myelencephalon | 2.49e-10 | 3 |
future myelencephalon | 2.49e-10 | 3 |
liver | 9.26e-10 | 19 |
digestive gland | 9.26e-10 | 19 |
liver bud | 9.26e-10 | 19 |
adult organism | 1.58e-09 | 114 |
hepatic diverticulum | 2.15e-08 | 22 |
liver primordium | 2.15e-08 | 22 |
lymph node | 2.29e-08 | 1 |
tricuspid valve | 2.64e-08 | 1 |
right atrium valve | 2.64e-08 | 1 |
outflow tract of atrium | 2.64e-08 | 1 |
outflow part of right atrium | 2.64e-08 | 1 |
right cardiac atrium | 2.64e-08 | 1 |
digestive tract diverticulum | 5.10e-08 | 23 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
endocrine system | 2.97e-07 | 45 |
sac | 4.61e-07 | 26 |