FFCP PHASE1:Hg19::chr3:160132223..160132271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10051 | |EntrezGene=10051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14013 | |HGNC=14013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493695_5end | |association_with_transcript=0bp_to_ENST00000493695_5end | ||
|cluster_id=chr3:160132223..160132271,+ | |||
|coexpression_cluster_id=C1923 | |||
|description=CAGE_peak_3_at_SMC4_5end | |description=CAGE_peak_3_at_SMC4_5end | ||
|id=chr3:160132223..160132271,+ | |id=chr3:160132223..160132271,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.71e-40!235;DOID:14566!6.57e-40!239;DOID:0050687!1.23e-19!143;DOID:2531!1.33e-16!51;DOID:0060083!1.33e-16!51;DOID:0050686!9.55e-16!137;DOID:305!4.91e-13!106;DOID:1240!9.60e-12!39;DOID:8692!3.97e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.49e-14;51!DOID:0060083;5.49e-14;51!DOID:1240;9.91e-13;39!DOID:8692;3.40e-11;31!DOID:0060058;2.07e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.68e-33,235;DOID:14566,2.65e-32,239;DOID:2531,7.85e-23,51;DOID:0060083,7.85e-23,51;DOID:0050686,3.42e-18,137;DOID:1240,1.20e-15,39;DOID:0050687,4.40e-12,143;DOID:8692,2.24e-11,31;DOID:305,1.16e-07,106;DOID:0060058,3.06e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0.572471974262113,4.65373045247806,1.50651167513763,1.91033514369878,1.47781061009902,1.96776953284198,0,0,0.154816123316076,0,0,0,2.01414721508784,2.27470771979874,0,1.10799081706375,0.802177789880567,0.434021741431704,0.223915474239924,0,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.512321413058201,0,1.37898272294647,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.997318288108159,0,1.16083695451434,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,1.64481199199607,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0.541607727530031,1.15282187753108,1.30059347559878,2.79544437826249,0.552700035571697,0.289803085735052,0.14828656316206,0.267540828089713,0,1.13309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.434473211648397,0,0.670700859703636,0,0.361439152384566,0,1.01392563272577,0,0,0.567208902984407,1.10864698731282,1.40535657109002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37559020970034,0,0,0,0,0,0,0.24406205754817,0,0,0.803697554556718,0.898117490504679,0.788280363383256,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0,0.573673241497627,1.06400514659507,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0.280901613404497,0,1.71968044236475,0,0,0,0,0.718618141816238,0.336672227908132,1.37630371859161,0,0,0,0.300476117813194,0.453728732640084,0.717558542755448,0.640672166455702,0.423863802319124,0.900273288253207,0,0.257640540045629,0.18611685633159,1.5189869901714,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0,0.508681776931463,0,0.272746120590835,0,0.487894824518382,0.265059536642971,0.580969714347592,1.0366105501537,1.51392510525377,1.09493207722749,0,0.643240938192885,0,0,0,0.709840800239063,1.18009283054671,1.20505514941741,0.882351781859152,1.08939722046203,2.13543557199987,1.48314438976181,0.784885860501384,1.15424147083917,0,0,0,0,1.26755034821831,2.94848165003288,0,0.441463099414651,0.860919069801795,0.514703430895577,0.109750285408626,0,0.904760751704678,0.370353780634118,0,0,0,0.811512834825538,0,0.144366447761074,0,0.951270761172991,1.58040879591855,0,0.246217006087397,0,0.594524649154913,0,0.503946384596579,0.283550194484773,1.61205340865127,1.16253575405585,0,0,0.704387472105808,0,0.144119953416961,0,0.698476837213859,0,0,0,0.411309970813294,0.600686115687835,0,0,0,0.66004457238855,0,0,0.845302752556,0,0,0,0,0.532844358032199,0.857867961948885,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.299918973546171,0,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0.821905290201534,0.358121926479791,2.24170287987055,0.394061520403854,0.862510299438069,0.513372145118994,0.254094624222463,0,1.54657762555539,0.502548796003046,1.27587750330633,0.749007023947182,5.9832291840805,0.414415513436035,0.24538298343828,0,0,0.831883446123229,0.356857977594324,1.41932173530541,0.585707074963566,0,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.767309866440312,0,0,0,0.64341568457443,0,3.85524234506639,0.177561725313127,0.739144404124282,0.519254429183621,0.232420756919918,0.483437798366489,0,0.368323955743585,0.574072240823034,2.54927635209404,0.524497659837696,0,0.231046011313244,0,0,0.527758144464379,0,0,1.51141141271498,0,0,0,0,0,0,3.06963827304308,1.0457418040996,0.256450125116389,0,0,0.206082023295445,3.38807019827871,0.660075999364704,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.537101224341368,0.870100163485371,0.767039646744908,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0.989838023675989,0,0,0,0,0,0,0,0,0,0.717056761020258,0.0982490410131212,0,1.06428319221179,0.633322905892992,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,3.41788312304498,0.952927101831156,0.822724546172388,0,0.540031437238115,0.79312517629427,0.640944426764839,0,2.20536194382929,8.36114288065734,0.865615277858669,1.42283686696828,3.50737800003409,2.59453182862662,0.191505370132367,0.211673582723883,3.24621940274555,4.49275484981534,2.51058146936511,3.13359791546046,0,3.04725200042886,2.08764497634809,6.65939033730457,2.12923118845163,1.03051603426729,2.15068535015921,0.671028323677248,1.00109485027145,2.9308214310306,2.50565556505718,0,2.43410110628385,0.99921590399346,0,0,0,1.8204078262427,2.45175445410452,1.98895302764489,0,0,0,0,0.281338832821026,0.445234820091624,2.47205811340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|short_description=p3@SMC4 | |short_description=p3@SMC4 | ||
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Latest revision as of 10:17, 16 September 2015
Short description: | p3@SMC4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMC4_5end |
Coexpression cluster: | C1923_acute_gall_diffuse_mesenchymal_Preadipocyte_epitheloid_papillary |
Association with transcript: | 0bp_to_ENST00000493695_5end |
EntrezGene: | SMC4 |
HGNC: | 14013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 9.68e-33 | 235 |
disease of cellular proliferation | 2.65e-32 | 239 |
hematologic cancer | 7.85e-23 | 51 |
immune system cancer | 7.85e-23 | 51 |
organ system cancer | 3.42e-18 | 137 |
leukemia | 1.20e-15 | 39 |
cell type cancer | 4.40e-12 | 143 |
myeloid leukemia | 2.24e-11 | 31 |
carcinoma | 1.16e-07 | 106 |
lymphoma | 3.06e-07 | 10 |